Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l16r
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   161   7e-40
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   161   7e-40
AY128466-1|AAM75059.1|  365|Drosophila melanogaster RE21580p pro...    28   9.5  
AF214524-1|AAF24503.1|  359|Drosophila melanogaster mab-21 protein.    28   9.5  
AE014298-831|AAF46112.2|  365|Drosophila melanogaster CG4746-PA ...    28   9.5  

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  161 bits (391), Expect = 7e-40
 Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
 Frame = -1

Query: 646 LVEIVAEKSAKEGY-PWSRIPEFTDEERELVRGASDFFGVNHYTGFLVSAN--EQISDRP 476
           ++E +   S ++G+   SR+PEFT EE   +RG SDFFG+N YT  LV++N        P
Sbjct: 292 MIERIRNLSKEQGFGARSRLPEFTTEEIHRIRGTSDFFGINSYTSNLVTSNGHNNTGKFP 351

Query: 475 TIPILPDI-TVGNYIPPEWPQSASYWLTLSPDSIYDTLTYLQKRYNDPIFYITENGWSSP 299
                 D+  V +    +WP S S WL + P  +Y+ L ++ + YN P   +TENG S  
Sbjct: 352 VPSFNHDMGVVESQEGVDWPGSGSVWLKVYPKGMYNLLMWIHREYNAPEIIVTENGVSD- 410

Query: 298 PTNGLLDDDRIRYYRAALESVLDCLDAGIRLKGYMAWSLMDNFEWLEGYTERFGLYEVDF 119
              GL D  R+ YY   L +VLD ++ G  + GY+AWSLMD++EW  G++E+FGLY VDF
Sbjct: 411 -RGGLEDYARVDYYNLYLSAVLDAMEDGANISGYIAWSLMDSYEWKAGFSEKFGLYHVDF 469

Query: 118 SDPARPRTPRKSAFVY 71
           + P R RTP+ SA V+
Sbjct: 470 NSPQRTRTPKISARVF 485


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  161 bits (391), Expect = 7e-40
 Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
 Frame = -1

Query: 646 LVEIVAEKSAKEGY-PWSRIPEFTDEERELVRGASDFFGVNHYTGFLVSAN--EQISDRP 476
           ++E +   S ++G+   SR+PEFT EE   +RG SDFFG+N YT  LV++N        P
Sbjct: 292 MIERIRNLSKEQGFGARSRLPEFTTEEIHRIRGTSDFFGINSYTSNLVTSNGHNNTGKFP 351

Query: 475 TIPILPDI-TVGNYIPPEWPQSASYWLTLSPDSIYDTLTYLQKRYNDPIFYITENGWSSP 299
                 D+  V +    +WP S S WL + P  +Y+ L ++ + YN P   +TENG S  
Sbjct: 352 VPSFNHDMGVVESQEGVDWPGSGSVWLKVYPKGMYNLLMWIHREYNAPEIIVTENGVSD- 410

Query: 298 PTNGLLDDDRIRYYRAALESVLDCLDAGIRLKGYMAWSLMDNFEWLEGYTERFGLYEVDF 119
              GL D  R+ YY   L +VLD ++ G  + GY+AWSLMD++EW  G++E+FGLY VDF
Sbjct: 411 -RGGLEDYARVDYYNLYLSAVLDAMEDGANISGYIAWSLMDSYEWKAGFSEKFGLYHVDF 469

Query: 118 SDPARPRTPRKSAFVY 71
           + P R RTP+ SA V+
Sbjct: 470 NSPQRTRTPKISARVF 485


>AY128466-1|AAM75059.1|  365|Drosophila melanogaster RE21580p
           protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 649 ELVEIVAEKSAKEGYPWSRIPEFTDEERELVRGAS 545
           E + +  + SA EG  W  +  FTD E  L++GAS
Sbjct: 220 ECIALQGKNSAMEGDAW--VLSFTDAENRLLQGAS 252


>AF214524-1|AAF24503.1|  359|Drosophila melanogaster mab-21 protein.
          Length = 359

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 649 ELVEIVAEKSAKEGYPWSRIPEFTDEERELVRGAS 545
           E + +  + SA EG  W  +  FTD E  L++GAS
Sbjct: 214 ECIALQGKNSAMEGDAW--VLSFTDAENRLLQGAS 246


>AE014298-831|AAF46112.2|  365|Drosophila melanogaster CG4746-PA
           protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 649 ELVEIVAEKSAKEGYPWSRIPEFTDEERELVRGAS 545
           E + +  + SA EG  W  +  FTD E  L++GAS
Sbjct: 220 ECIALQGKNSAMEGDAW--VLSFTDAENRLLQGAS 252


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,101,610
Number of Sequences: 53049
Number of extensions: 690936
Number of successful extensions: 2131
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2127
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)