Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l16f
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   227   1e-59
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   227   1e-59

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  227 bits (554), Expect = 1e-59
 Identities = 97/179 (54%), Positives = 130/179 (72%)
 Frame = +3

Query: 12  MKFFLALGFLVVCCSALSTKQQRRFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHN 191
           M+  L L  L   C      Q RRFP+DFL G  ++SYQIEG WN D KGE+IWD+LTH 
Sbjct: 2   MQIILPLFVLTASCLGSPVSQTRRFPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHT 61

Query: 192 NPAAVKDGSTGDIAANSYHNVERDVEMMRELGLDVYRFSLSWSRILPSGFANEINEAGVD 371
           +P  + D S GD++A+SYH  +RDV+M++EL +  YRFSLSW RI+P G+ N ++ AG+ 
Sbjct: 62  HPEKIVDRSNGDVSADSYHQWKRDVQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIK 121

Query: 372 YYNRLINEMLKYGITPMITLFHWDLPQKLQELGGFANPLASIWFEDYARVVYTNFGDRV 548
           YY+ LI+E+L+Y ITPM+T++HW+LPQKLQELGG+ NP     F+DYAR+V   +GDRV
Sbjct: 122 YYSNLIDELLRYNITPMVTIYHWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRV 180



 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 550 KHWITINEPREICYEGYG 603
           K W T+NEP  +C  GYG
Sbjct: 181 KIWTTVNEPWHVCEHGYG 198


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  227 bits (554), Expect = 1e-59
 Identities = 97/179 (54%), Positives = 130/179 (72%)
 Frame = +3

Query: 12  MKFFLALGFLVVCCSALSTKQQRRFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHN 191
           M+  L L  L   C      Q RRFP+DFL G  ++SYQIEG WN D KGE+IWD+LTH 
Sbjct: 2   MQIILPLFVLTASCLGSPVSQTRRFPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHT 61

Query: 192 NPAAVKDGSTGDIAANSYHNVERDVEMMRELGLDVYRFSLSWSRILPSGFANEINEAGVD 371
           +P  + D S GD++A+SYH  +RDV+M++EL +  YRFSLSW RI+P G+ N ++ AG+ 
Sbjct: 62  HPEKIVDRSNGDVSADSYHQWKRDVQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIK 121

Query: 372 YYNRLINEMLKYGITPMITLFHWDLPQKLQELGGFANPLASIWFEDYARVVYTNFGDRV 548
           YY+ LI+E+L+Y ITPM+T++HW+LPQKLQELGG+ NP     F+DYAR+V   +GDRV
Sbjct: 122 YYSNLIDELLRYNITPMVTIYHWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRV 180



 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 550 KHWITINEPREICYEGYG 603
           K W T+NEP  +C  GYG
Sbjct: 181 KIWTTVNEPWHVCEHGYG 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,050,199
Number of Sequences: 53049
Number of extensions: 491060
Number of successful extensions: 1763
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1763
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)