Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l14r
         (748 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1520 + 27415266-27415507,27415608-27415722,27415761-274158...    29   3.0  
07_01_0442 - 3348638-3349126,3349978-3350322                           29   3.9  

>07_03_1520 +
           27415266-27415507,27415608-27415722,27415761-27415815,
           27415862-27417849,27418161-27418589
          Length = 942

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 432 VYSTDNNVSYFNKMPSNQ*LKTSTVINEVVDKLEYARAFI 313
           +Y  +NN SY N     Q ++  TV+ E   K+E  R F+
Sbjct: 875 IYMMENNCSYANCFNECQMMEALTVVEETPSKVEKYRLFM 914


>07_01_0442 - 3348638-3349126,3349978-3350322
          Length = 277

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +1

Query: 127 LLGTLIKLHFVLQIVQHTFYSQFLNSILINTYPTIYKTTLL*SMKFIY 270
           +L   + +HF+ +I++  F  Q+  S+ +NT  TI  + L+ +   IY
Sbjct: 100 VLSAALTVHFLKRILEVLFIHQYSGSMPLNTAATISSSYLVITATMIY 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,737,219
Number of Sequences: 37544
Number of extensions: 265042
Number of successful extensions: 487
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)