BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l14r
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY048675-1|AAL06601.1| 927|Drosophila melanogaster myosin phosp... 31 1.7
AE013599-1661|AAM68600.1| 142|Drosophila melanogaster CG30058-P... 31 1.7
>AY048675-1|AAL06601.1| 927|Drosophila melanogaster myosin
phosphatase DMBS-L protein.
Length = 927
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 525 SNLLLFYILSATTTTSQKGSFIMNSF*ILNTVYSTDNNVSYFNKMPS 385
S+LLL Y TTTTS + + I N +S NN S + P+
Sbjct: 461 SDLLLGYAAGTTTTTSTPTTTTTTTSSIFNNTHSNTNNTSTTQQQPA 507
>AE013599-1661|AAM68600.1| 142|Drosophila melanogaster CG30058-PA
protein.
Length = 142
Score = 31.1 bits (67), Expect = 1.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 675 MLVLVHCTHCICVILILFSSIIRKQN 598
++ +VH H +C+IL+L S +R +N
Sbjct: 52 VVAIVHIAHIVCIILVLVSLCVRNKN 77
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,973,240
Number of Sequences: 53049
Number of extensions: 509864
Number of successful extensions: 1049
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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