Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l14f
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    47   1e-07
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    47   1e-07
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    27   0.11 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    27   0.11 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    27   0.11 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   1.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   4.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   4.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   5.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   7.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   9.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.8  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 46.8 bits (106), Expect = 1e-07
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = +3

Query: 417 LPPEPRLWTREDVSVFLKWCEREFDLPNFDMDLFQMNGKALCLLT 551
           LP +PR WTRE V+ ++    ++  LP      F MNGKALCL++
Sbjct: 32  LPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMS 76


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 46.8 bits (106), Expect = 1e-07
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = +3

Query: 417 LPPEPRLWTREDVSVFLKWCEREFDLPNFDMDLFQMNGKALCLLT 551
           LP +PR WTRE V+ ++    ++  LP      F MNGKALCL++
Sbjct: 32  LPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMS 76


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +1

Query: 343 GVTHYPGRHRLLHRLVTPRRNCQPVFRQNQDYGPERMF 456
           G  H+P ++++     T R++ Q  ++ NQ+  P  M+
Sbjct: 280 GSMHFPNQYQMNQEYRTDRKHTQQHYQMNQNMYPGEMY 317


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +1

Query: 343 GVTHYPGRHRLLHRLVTPRRNCQPVFRQNQDYGPERMF 456
           G  H+P ++++     T R++ Q  ++ NQ+  P  M+
Sbjct: 228 GSMHFPNQYQMNQEYRTDRKHTQQHYQMNQNMYPGEMY 265


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +1

Query: 343 GVTHYPGRHRLLHRLVTPRRNCQPVFRQNQDYGPERMF 456
           G  H+P ++++     T R++ Q  ++ NQ+  P  M+
Sbjct: 411 GSMHFPNQYQMNQEYRTDRKHTQQHYQMNQNMYPGEMY 448


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 138 TQSTRHTRNGGDPSKR 91
           T + +H R  GDPSKR
Sbjct: 345 TAAGKHLRKVGDPSKR 360


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 91  TFGGITAVTRVSGALCTLNSVLTFVMIMYV 180
           TF G+T+ T +   L       TF+M++ V
Sbjct: 59  TFSGVTSPTIMKFVLSFRTGSFTFLMVVAV 88


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 91  TFGGITAVTRVSGALCTLNSVLTFVMIMYV 180
           TF G+T+ T +   L       TF+M++ V
Sbjct: 59  TFSGVTSPTIMKFVLSFRTGSFTFLMVVAV 88


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 111 RYACVWCSVYTEFC 152
           RY+C  CS  T++C
Sbjct: 286 RYSCRDCSYATKYC 299


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 111 RYACVWCSVYTEFC 152
           RY+C  CS  T++C
Sbjct: 44  RYSCRDCSYATKYC 57


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 387 GDTKAQLPAGLPPEPRLWTREDVS 458
           G   A++  GLP   R W  +D S
Sbjct: 287 GAPSAKIVLGLPTFGRAWAMDDES 310


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 412 PVFRQNQDYGPERMFLY 462
           P FR+N+   PE+++ Y
Sbjct: 20  PGFRKNRTTCPEKIYAY 36


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 412 PVFRQNQDYGPERMFLY 462
           P FR+N+   PE+++ Y
Sbjct: 20  PGFRKNRTTCPEKIYAY 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,998
Number of Sequences: 336
Number of extensions: 2661
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)