Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l14f
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   0.99 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.0  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   5.3  
AF457562-1|AAL68792.1|   78|Anopheles gambiae hypothetical prote...    23   7.0  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 0.99
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 508  ISKLGRSNSLSHHFRNTETSSLVHSLGSGGRP 413
            I+ L  S S+ + + N    S+ +  G+GG P
Sbjct: 2050 INTLNTSYSIDYEYENDNLRSIKYPFGAGGEP 2081


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -2

Query: 190 QLSTRTLSSQKLAQNSVYTE--HQTHA*RR*SLQTCRVTARRKPAAYLRERTRKRAFRTA 17
           +L+ RT+   ++A  +   E   +  A  R   + CR  ARR P A  R    +   R +
Sbjct: 471 RLTRRTIPPTRVAAAAAAPEGRRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKS 530

Query: 16  LRRG 5
            +RG
Sbjct: 531 TKRG 534


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +2

Query: 260 NESCKLTTAVWAQYGAATATIQSNRTIMALPTTLGATASFTAW*HQGATASRSSARTKT 436
           + SC L+T +  Q   A A++QS    + +    GAT+S  +  ++   +   SAR KT
Sbjct: 129 SSSCSLST-LETQTATAGASVQS----LPIAIATGATSSTVSLTYEDELSPGGSARRKT 182


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 420 PPEPRLWTREDVSVFLKWCEREFDLPNFDMDLFQMNGKALCLLTKTD 560
           PP P+ W  ED+ V L    +E   P+  + L  +  K   +  +TD
Sbjct: 513 PPIPQRWQDEDILVVLSKIMQECWHPSPAVRLTALRVKKTLVKLETD 559


>AF457562-1|AAL68792.1|   78|Anopheles gambiae hypothetical protein
           15 protein.
          Length = 78

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -2

Query: 487 NSLSHHFRNTETSSLVHSLGSGGRPA 410
           N++++  ++ + S+  HSLG+G R A
Sbjct: 39  NTIANKSKDKKASAPKHSLGTGARMA 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,703
Number of Sequences: 2352
Number of extensions: 11685
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)