Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l12r
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...   255   2e-70
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...   252   2e-69
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...   252   2e-69
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    31   0.010
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.6  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score =  255 bits (625), Expect = 2e-70
 Identities = 120/214 (56%), Positives = 148/214 (69%)
 Frame = -2

Query: 706 NQLRWLVNXGPQWGLLASGDALTFIDNHDNQRGHGAGGNILTYKQSRQYKGAIAFMLAHP 527
           NQL  L N GP+W LL   DA+ FIDNHDNQR    G  ILTYK  + YK AIAFMLAHP
Sbjct: 277 NQLANLANWGPEWNLLDGLDAVAFIDNHDNQRT--GGSQILTYKNPKPYKMAIAFMLAHP 334

Query: 526 YGYPQLMSSFAFTDTEAGPPMNSRGDITSPTINADNSCGNGWICEHRWRQIHNMVVFRNT 347
           YG  +LMSSFAF + + GPP +  G++ SP+IN D +CGNG++CEHRWRQI NMV FRN 
Sbjct: 335 YGTTRLMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCGNGYVCEHRWRQIFNMVGFRNA 394

Query: 346 AGNGALTNWWDNGSNQIAFCRGNQAFIAFNNDAWDMDQTLQTCLPAGTYCDIISGARSGN 167
                + NWW +G+ QIAF RGN+ F+AF    +D++Q LQT LPAG+YCD+ISG     
Sbjct: 395 VQGTGIENWWSDGNQQIAFGRGNKGFVAF-TIGYDLNQHLQTGLPAGSYCDVISGNAENG 453

Query: 166 RCTGKSIVVGSDGRARIIHRSNEYDMMVAIHRGA 65
            C+GK+I VG DG A I   +NE D ++AIH  A
Sbjct: 454 SCSGKTITVGGDGYADISLGANEDDGVIAIHVNA 487


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score =  252 bits (618), Expect = 2e-69
 Identities = 120/214 (56%), Positives = 147/214 (68%)
 Frame = -2

Query: 706 NQLRWLVNXGPQWGLLASGDALTFIDNHDNQRGHGAGGNILTYKQSRQYKGAIAFMLAHP 527
           NQL  L N GP+W LL   DA+ FIDNHDNQR    G  ILTYK  + YK AIAFMLAHP
Sbjct: 278 NQLANLANWGPEWNLLDGLDAVAFIDNHDNQRT--GGSQILTYKNPKPYKMAIAFMLAHP 335

Query: 526 YGYPQLMSSFAFTDTEAGPPMNSRGDITSPTINADNSCGNGWICEHRWRQIHNMVVFRNT 347
           YG  +LMSSFAF + + GPP +  G++ SP+IN D +CGNG+ CEHRWRQI NMV FRN 
Sbjct: 336 YGTTRLMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCGNGYGCEHRWRQIFNMVGFRNA 395

Query: 346 AGNGALTNWWDNGSNQIAFCRGNQAFIAFNNDAWDMDQTLQTCLPAGTYCDIISGARSGN 167
                + NWW +G+ QIAF RGN+ F+AF    +D++Q LQT LPAG+YCD+ISG     
Sbjct: 396 VQGTGIENWWSDGNQQIAFGRGNKGFVAF-TIGYDLNQHLQTGLPAGSYCDVISGNAENG 454

Query: 166 RCTGKSIVVGSDGRARIIHRSNEYDMMVAIHRGA 65
            C+GK+I VG DG A I   +NE D ++AIH  A
Sbjct: 455 SCSGKTITVGGDGYADISLGANEDDGVIAIHVNA 488


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score =  252 bits (618), Expect = 2e-69
 Identities = 118/214 (55%), Positives = 147/214 (68%)
 Frame = -2

Query: 706 NQLRWLVNXGPQWGLLASGDALTFIDNHDNQRGHGAGGNILTYKQSRQYKGAIAFMLAHP 527
           NQL  L N GP+W LL   DA+ FIDNHDNQR    G  ILTYK  + YK AIAFMLAHP
Sbjct: 278 NQLANLANWGPEWNLLDGLDAVAFIDNHDNQRT--GGSQILTYKNPKPYKMAIAFMLAHP 335

Query: 526 YGYPQLMSSFAFTDTEAGPPMNSRGDITSPTINADNSCGNGWICEHRWRQIHNMVVFRNT 347
           YG  +LMSSFAF + + GPP +  G++ SP+IN D +CGNG++CEHRWRQI NMV FRN 
Sbjct: 336 YGTTRLMSSFAFDNNDQGPPQDGAGNLISPSINDDGTCGNGYVCEHRWRQIFNMVGFRNA 395

Query: 346 AGNGALTNWWDNGSNQIAFCRGNQAFIAFNNDAWDMDQTLQTCLPAGTYCDIISGARSGN 167
                + NWW +G+ QIAF RGN+ F+AF    +D++Q  +T LPAG+YCD+ISG     
Sbjct: 396 VQETGIENWWSDGNQQIAFGRGNKGFVAF-TIGYDLNQHFETGLPAGSYCDVISGNAENG 454

Query: 166 RCTGKSIVVGSDGRARIIHRSNEYDMMVAIHRGA 65
            C+GK+I VG DG A I   +NE D ++AIH  A
Sbjct: 455 SCSGKTITVGGDGYADISLGANEDDGVIAIHVNA 488


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 569 PTI-QGRYRFHVGTSLWLPSIDE*FRLHGHRSWTSNEQ 459
           PTI    Y     +S+W P+  + F L  HRSW S+ Q
Sbjct: 203 PTIASATYTNSANSSIWSPASIDSFTLEQHRSWCSSSQ 240


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 422 ISVDSRRGDITPAVHWRSSFGVREG-ETTHQLRVAIRMCQHESDSAL-VLSGLLV 580
           +SV  R G+I   +  ++ FG R G ET  QL   I    +E+  AL VL G  V
Sbjct: 181 LSVKPRDGEIVANITAKTFFGARHGLETLSQL---IWWDDYETKGALKVLKGATV 232


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 392 LAYPTIAARIISVDSRRGDITPAVH 466
           L YP  AAR +   +RRG++   +H
Sbjct: 212 LVYPFEAAREVVAKNRRGELFYYMH 236


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 157 QCSGYQTWRRK*YRSMFRRGDKSEESGPCP 246
           QCSG   W     R++F R   + ++  CP
Sbjct: 219 QCSGTIDWALPNKRTVFIRKGGTAKASMCP 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,763
Number of Sequences: 336
Number of extensions: 4437
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)