BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11l12r (749 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 267 7e-74 DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 27 0.19 >AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. Length = 493 Score = 267 bits (655), Expect = 7e-74 Identities = 121/218 (55%), Positives = 151/218 (69%) Frame = -2 Query: 727 SSXSKEENQLRWLVNXGPQWGLLASGDALTFIDNHDNQRGHGAGGNILTYKQSRQYKGAI 548 S+ + N L+WLVN G QWG L S D+L F+DNHD QR + ILTYK S++YK A+ Sbjct: 274 SNAFRGNNNLKWLVNWGEQWGFLPSKDSLVFVDNHDTQRDNP---QILTYKYSKRYKMAV 330 Query: 547 AFMLAHPYGYPQLMSSFAFTDTEAGPPMNSRGDITSPTINADNSCGNGWICEHRWRQIHN 368 AFML+HP+G P++MSSF F + GPP + G+I SP+I+ DN C NGWICEHRWRQI+N Sbjct: 331 AFMLSHPFGTPRIMSSFDFQSKDQGPPNDGNGNILSPSIH-DNICSNGWICEHRWRQIYN 389 Query: 367 MVVFRNTAGNGALTNWWDNGSNQIAFCRGNQAFIAFNNDAWDMDQTLQTCLPAGTYCDII 188 MV FRN + NWWDNGSNQIAF RG F+AFN D +D+ + L+ CLP G YCD+I Sbjct: 390 MVRFRNLVKGTKIDNWWDNGSNQIAFSRGCSGFVAFNGDQYDLKKNLKVCLPPGQYCDVI 449 Query: 187 SGARSGNRCTGKSIVVGSDGRARIIHRSNEYDMMVAIH 74 SG RCTGK + VGSDG A I + E D ++AIH Sbjct: 450 SGNLEKGRCTGKIVTVGSDGNANIEIGAGEEDGVLAIH 487 >DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. Length = 828 Score = 27.1 bits (57), Expect = 0.19 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = -1 Query: 629 QPRQPERSWRWWKHLDIQAIPTIQGRYRF---HVGTSLWLPSI 510 QP+QP + + WK + T+Q R H+ + W+PSI Sbjct: 438 QPKQPIKLFEQWKSILESGTTTLQTRTMHPYDHLVWNSWMPSI 480 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 227,652 Number of Sequences: 438 Number of extensions: 5323 Number of successful extensions: 15 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23510295 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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