Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l08r
(722 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 335 2e-92
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 335 2e-92
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 334 4e-92
SB_56| Best HMM Match : Actin (HMM E-Value=0) 334 4e-92
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 334 4e-92
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 332 2e-91
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 257 8e-69
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 3e-29
SB_54| Best HMM Match : Actin (HMM E-Value=0) 118 6e-27
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 86 3e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 9e-12
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 58 1e-08
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 41 0.001
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.006
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.54
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 5.0
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 5.0
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 6.7
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 8.8
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 8.8
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 28 8.8
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 335 bits (824), Expect = 2e-92
Identities = 156/168 (92%), Positives = 163/168 (97%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 543
IVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFL
Sbjct: 171 IVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFL 230
Query: 542 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 363
GMES GIHET YNSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEI+ALAP T+KI
Sbjct: 231 GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKI 290
Query: 362 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 291 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 335 bits (823), Expect = 2e-92
Identities = 156/168 (92%), Positives = 163/168 (97%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 543
IVRDIKEKLCYVALDFEQEM TAA+S+S+EKSYELPDGQVITIGNERFRCPEAL QPSFL
Sbjct: 182 IVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFL 241
Query: 542 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 363
GMES GIHET YNSIMKCDVDIRKDLYANTVMSGGTTMYPG+ADRMQKEI+ALAPST+KI
Sbjct: 242 GMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKI 301
Query: 362 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 302 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 334 bits (821), Expect = 4e-92
Identities = 155/168 (92%), Positives = 163/168 (97%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 543
IVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFL 268
Query: 542 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 363
GMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KI
Sbjct: 269 GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKI 328
Query: 362 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 334 bits (821), Expect = 4e-92
Identities = 155/168 (92%), Positives = 163/168 (97%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 543
IVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFL
Sbjct: 208 IVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFL 267
Query: 542 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 363
GMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KI
Sbjct: 268 GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKI 327
Query: 362 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 334 bits (821), Expect = 4e-92
Identities = 155/168 (92%), Positives = 163/168 (97%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 543
IVRDIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFL
Sbjct: 209 IVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFL 268
Query: 542 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 363
GMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI+ALAP T+KI
Sbjct: 269 GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKI 328
Query: 362 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 332 bits (815), Expect = 2e-91
Identities = 155/168 (92%), Positives = 163/168 (97%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 543
IVRDIKEKL YVALDFEQEMATAAAS+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFL
Sbjct: 208 IVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFL 267
Query: 542 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 363
GMES GIHET YNSIMKCDVDIRKDLYANTV+SGG+TM+PGIADRMQKEI+ALAP T+KI
Sbjct: 268 GMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKI 327
Query: 362 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 219
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 257 bits (629), Expect = 8e-69
Identities = 116/145 (80%), Positives = 132/145 (91%)
Frame = -1
Query: 653 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 474
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 473 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLS 294
KDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 293 TFQQMWISKEEYDESGPGIVHRKCF 219
TFQQMWI+KEEY E GP IVHRKCF
Sbjct: 125 TFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 125 bits (302), Expect = 3e-29
Identities = 72/187 (38%), Positives = 105/187 (56%), Gaps = 29/187 (15%)
Frame = -1
Query: 719 VRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 540
VR +KEKLCYV + EQE A +T L + Y LPDG+V+ + ERF PEALFQP +
Sbjct: 213 VRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLIN 272
Query: 539 MESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-------- 384
+E G+ E ++N+I D+D R + Y + V+SGG+TMYPG+ R+++EI L
Sbjct: 273 VEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKG 332
Query: 383 -------------APSTI-----KIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISK 267
P T K KI I P RK+ V++GG++LA + W+++
Sbjct: 333 DTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTR 392
Query: 266 EEYDESG 246
+EY+E G
Sbjct: 393 KEYEEKG 399
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 118 bits (283), Expect = 6e-27
Identities = 52/94 (55%), Positives = 68/94 (72%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 543
I+RD+KE LCY A+D+E+E+ A S E Y LPDGQ I IG+ERFR E LFQPS L
Sbjct: 2253 IIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLL 2312
Query: 542 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 441
G + GIHE+++ SI KCD+D+R +L+ N V+SG
Sbjct: 2313 GRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 17/145 (11%)
Frame = -1
Query: 602 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 426
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 425 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILASLS 294
R+Q++I + P I+ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 293 TFQQMWISKEEYDESGPGIVHRKCF 219
F + +K +YDE GP I F
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 9e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = -1
Query: 542 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 363
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 362 KII---APPERKYSVWIGGSILASL 297
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/60 (46%), Positives = 37/60 (61%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 543
IV DIKEK+CY++ D +E+ + L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 839 IVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Frame = -1
Query: 536 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 372
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 371 --IK-IKIIAPP-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 252
IK +K+ PP + W+GG+I SL ++E Y +
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEM 663
IVRDIKEKLCYVALDF QE+
Sbjct: 87 IVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = -1
Query: 524 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 420
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 572 PEALFQPSFLGMESCGIHETV 510
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -3
Query: 528 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 349
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 348 PREEVLRMDRWIHPG 304
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -3
Query: 552 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 379
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 378 LDHQ 367
H+
Sbjct: 954 RKHE 957
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 310 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 447
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = -3
Query: 525 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 352
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 351 SPREEVLRMDRWIHP 307
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 458 NTVMSGGTTMYPGIADRMQKEITALAP 378
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = -3
Query: 528 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 361
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 360 DHRSPREEVLRMDRWIH 310
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = -3
Query: 573 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 394
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 393 HRPRALDHQ 367
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 6.7
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = -3
Query: 531 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 358
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 357 -HRSPREEVLRMDRWIHPGFPVHLPADVD 274
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -3
Query: 522 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 352
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 461 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 342
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = -3
Query: 528 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 349
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 348 PREEVLRMDRWIH 310
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 707 KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 567
+EK+ L+ E E A + LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -3
Query: 501 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 328
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 327 MDRWIHP 307
+R +HP
Sbjct: 214 EERGVHP 220
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -3
Query: 531 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 352
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 351 SPREE 337
R+E
Sbjct: 606 DQRDE 610
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = -1
Query: 722 IVRDIKEKLCYVALDFEQEMATA---AASTSLEKSYELPD 612
++ +KE CYV+ F ++M A ++ + Y LPD
Sbjct: 395 VINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,732,387
Number of Sequences: 59808
Number of extensions: 418233
Number of successful extensions: 1396
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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