Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l08f
(605 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 357 3e-99
SB_56| Best HMM Match : Actin (HMM E-Value=0) 357 3e-99
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 357 3e-99
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 357 5e-99
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 336 8e-93
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 187 7e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 8e-42
SB_54| Best HMM Match : Actin (HMM E-Value=0) 147 7e-36
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 135 3e-32
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 112 2e-25
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 100 1e-21
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 54 1e-07
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 52 4e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 50 1e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.001
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.96
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.7
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 2.9
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 3.9
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 6.7
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 8.9
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 357 bits (879), Expect = 3e-99
Identities = 164/167 (98%), Positives = 167/167 (100%)
Frame = +2
Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 283
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 12 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 71
Query: 284 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 463
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA
Sbjct: 72 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 131
Query: 464 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
MYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL 178
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 357 bits (879), Expect = 3e-99
Identities = 164/167 (98%), Positives = 167/167 (100%)
Frame = +2
Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 283
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 12 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 71
Query: 284 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 463
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA
Sbjct: 72 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 131
Query: 464 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
MYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL 178
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 357 bits (879), Expect = 3e-99
Identities = 164/167 (98%), Positives = 167/167 (100%)
Frame = +2
Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 283
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 284 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 463
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 132
Query: 464 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
MYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL 179
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 357 bits (877), Expect = 5e-99
Identities = 163/167 (97%), Positives = 167/167 (100%)
Frame = +2
Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 283
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 284 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 463
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 132
Query: 464 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
MYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RL
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRL 179
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 336 bits (826), Expect = 8e-93
Identities = 156/161 (96%), Positives = 159/161 (98%), Gaps = 2/161 (1%)
Frame = +2
Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 283
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 284 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 463
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 132
Query: 464 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 580
MYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 187 bits (455), Expect = 7e-48
Identities = 86/170 (50%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Frame = +2
Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 277
NG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R +L + Y
Sbjct: 13 NGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYMLEVNY 72
Query: 278 PIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 454
P+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++MFE +
Sbjct: 73 PMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQ 132
Query: 455 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
+Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RL
Sbjct: 133 FEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRL 182
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 167 bits (405), Expect = 8e-42
Identities = 75/79 (94%), Positives = 76/79 (96%)
Frame = +2
Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 283
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 12 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 71
Query: 284 EHGIITNWDDMEKIWHHTF 340
EHGI+TNWDDMEKI TF
Sbjct: 72 EHGIVTNWDDMEKIMFETF 90
Score = 120 bits (290), Expect = 7e-28
Identities = 56/64 (87%), Positives = 61/64 (95%)
Frame = +2
Query: 413 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 592
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 593 ILRL 604
I+RL
Sbjct: 138 IIRL 141
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 147 bits (356), Expect = 7e-36
Identities = 66/95 (69%), Positives = 79/95 (83%)
Frame = +2
Query: 320 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 499
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 500 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRI 2223
Score = 54.0 bits (124), Expect = 9e-08
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 193
NGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2101 NGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 135 bits (326), Expect = 3e-32
Identities = 56/78 (71%), Positives = 73/78 (93%)
Frame = +2
Query: 368 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 547
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 548 SHTVPIYEGYALPHAILR 601
SH+VPIYEG+A+PH+I+R
Sbjct: 186 SHSVPIYEGFAMPHSIMR 203
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 112 bits (269), Expect = 2e-25
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +2
Query: 434 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRL
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRL 57
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 100 bits (239), Expect = 1e-21
Identities = 43/108 (39%), Positives = 72/108 (66%)
Frame = +2
Query: 278 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 457
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 458 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 601
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVR 110
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +2
Query: 206 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 385
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 515 TGIVLDSGDGVSHTVPI 565
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +2
Query: 107 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 193
GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1364 GSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Frame = +2
Query: 113 GMC--KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY--P 280
G C K GFA + APR++ P+ + + + + ++ ++GD+ + + L Y P
Sbjct: 241 GACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDYSALFYVLP 292
Query: 281 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 460
+ G + NWD ++IW +TF E + M +I+FE +N
Sbjct: 293 FQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEILFEEYNFK 332
Query: 461 AMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 601
A+ A LS Y S +V+D+G +H VP++ G + A+ R
Sbjct: 333 ALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVRR 385
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +2
Query: 29 IPASPTQTHTKFKMXXXXXXXXXXXNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 208
IP + + ++ FK+ NG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 209 --MGQKD-SYVGDEAQSKRGILTL 271
+ KD GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +2
Query: 479 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
Q LSLYASG T G+ L SG + IYEG+ L H + L
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTL 808
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = -2
Query: 190 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNI 80
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDI 37
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 8/49 (16%)
Frame = +2
Query: 473 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAI 595
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCI 88
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 323 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 502
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 503 SGRTTGIV 526
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 111 PACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 245
P+ R TT+P P +PSWV + + W TW RP
Sbjct: 40 PSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 269 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 421
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.96
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 410 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 526
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -2
Query: 430 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 251
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 250 AL 245
++
Sbjct: 214 SV 215
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 2.9
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -3
Query: 555 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 403
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 402 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 238
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 598 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 500
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 413 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 562
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 398 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 526
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 195 PWWRGRPTMDGKTARGASSPAKPALHMPEP 106
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 564 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 388
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 387 VSSTGCSSGATRSSL*KVW 331
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -3
Query: 591 AWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMIWVIFSLL 412
+W P T W +PSP+ T P ++T+W + +S++ +I L
Sbjct: 101 SWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSLYHIIGRLS 160
Query: 411 ALGLR 397
+ R
Sbjct: 161 GVHYR 165
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -3
Query: 489 STAWMATYMAGELKVSNMIWV---IFSLLALGL 400
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 189 WRGRPTMDGKTARGASSPAKPALHMPEP 106
W + G T R PAKPAL++P P
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSP 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,422,552
Number of Sequences: 59808
Number of extensions: 377521
Number of successful extensions: 1389
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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