Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l08f
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         358   e-101
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         358   e-101
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         358   e-101
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          348   7e-98
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   0.82 
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   1.4  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   1.4  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   3.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   3.3  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   3.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  358 bits (881), Expect = e-101
 Identities = 165/167 (98%), Positives = 167/167 (100%)
 Frame = +2

Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 283
           NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13  NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72

Query: 284 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 463
           EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73  EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132

Query: 464 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
           MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 179


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  358 bits (881), Expect = e-101
 Identities = 165/167 (98%), Positives = 167/167 (100%)
 Frame = +2

Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 283
           NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13  NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72

Query: 284 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 463
           EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73  EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132

Query: 464 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
           MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 179


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  358 bits (881), Expect = e-101
 Identities = 165/167 (98%), Positives = 167/167 (100%)
 Frame = +2

Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 283
           NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13  NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72

Query: 284 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 463
           EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73  EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132

Query: 464 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
           MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 179


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  348 bits (856), Expect = 7e-98
 Identities = 159/167 (95%), Positives = 165/167 (98%)
 Frame = +2

Query: 104 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 283
           NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQSKRGILTLKYPI
Sbjct: 13  NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQSKRGILTLKYPI 72

Query: 284 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 463
           EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKMTQIMFETF +PA
Sbjct: 73  EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFAAPA 132

Query: 464 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 604
           +YVAIQAVLSLYASGRTTG+VLDSGDGVSHTVPIYEGYALPHAILR+
Sbjct: 133 VYVAIQAVLSLYASGRTTGVVLDSGDGVSHTVPIYEGYALPHAILRM 179


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +1

Query: 181 PSPPGRDGRYGPERL--LRG*RGPE 249
           P P GRDG +GP  L   +G RG E
Sbjct: 346 PGPRGRDGNFGPVGLPGQKGDRGSE 370


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = -3

Query: 264 RIPLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 127
           R P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178



 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 537 EMVSPTPYPSTKVTLCPTPSSVW 605
           E  + T +P+T  T  PT  S W
Sbjct: 124 EATTTTRFPTTTTTSAPTTPSQW 146


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = -3

Query: 264 RIPLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 127
           R P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178



 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 537 EMVSPTPYPSTKVTLCPTPSSVW 605
           E  + T +P+T  T  PT  S W
Sbjct: 124 EATTTTRFPTTTTTSAPTTPSQW 146


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 108 APACARPVSPATTRPAPSS 164
           APA A+P      +PAPSS
Sbjct: 411 APATAKPTPKPIPKPAPSS 429


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 108 APACARPVSPATTRPAPSS 164
           APA A+P      +PAPSS
Sbjct: 411 APATAKPTPKPIPKPAPSS 429


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
 Frame = -3

Query: 264 RIPLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 127
           + P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 131 KFPTTTTTSAPTTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 179



 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 537 EMVSPTPYPSTKVTLCPTPSSVW 605
           E  + T +P+T  T  PT  S W
Sbjct: 125 EATTTTKFPTTTTTSAPTTPSQW 147


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 537 EMVSPTPYPSTKVTLCPTPSSVW 605
           E  + T +P+T  T  PT  S W
Sbjct: 125 EATTTTTFPTTTTTSAPTTPSQW 147



 Score = 23.4 bits (48), Expect = 5.8
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
 Frame = -3

Query: 258 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 127
           P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 537 EMVSPTPYPSTKVTLCPTPSSVW 605
           E  + T +P+T  T  PT  S W
Sbjct: 125 EATTTTTFPTTTTTSAPTTPSQW 147



 Score = 23.4 bits (48), Expect = 5.8
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
 Frame = -3

Query: 258 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 127
           P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 537 EMVSPTPYPSTKVTLCPTPSSVW 605
           E  + T +P+T  T  PT  S W
Sbjct: 125 EATTTTTFPTTTTTSAPTTPSQW 147



 Score = 23.4 bits (48), Expect = 5.8
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
 Frame = -3

Query: 258 PLLLWASSPT*ESFWPIPTI---TPWWRGRPTMDGKTARGASSPAKP 127
           P     S+PT  S W  PTI   TP W    T    T     S   P
Sbjct: 133 PTTTTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 537 EMVSPTPYPSTKVTLCPTPSSVW 605
           E  + T +P+T  T  PT  S W
Sbjct: 125 EATTTTTFPTTTTTSAPTTPSQW 147


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 537 EMVSPTPYPSTKVTLCPTPSSVW 605
           E  + T +P+T  T  PT  S W
Sbjct: 125 EATTTTTFPTTTTTSAPTTPSQW 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,121
Number of Sequences: 2352
Number of extensions: 11492
Number of successful extensions: 51
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)