Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l05r
         (428 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17394-1|CAA76761.1|  197|Homo sapiens prefoldin subunit 3 protein.   141   1e-33
U96759-1|AAC23907.1|  160|Homo sapiens von Hippel-Lindau binding...   141   1e-33
U56833-1|AAC50617.1|  166|Homo sapiens VHL binding protein-1 pro...   141   1e-33
CR541932-1|CAG46730.1|  160|Homo sapiens VBP1 protein.                141   1e-33
BT019604-1|AAV38411.1|  197|Homo sapiens von Hippel-Lindau bindi...   141   1e-33
BC046094-1|AAH46094.1|  197|Homo sapiens von Hippel-Lindau bindi...   141   1e-33
AL356738-8|CAI41469.1|  197|Homo sapiens von Hippel-Lindau bindi...   140   2e-33
AB040901-1|BAA95992.1|  985|Homo sapiens KIAA1468 protein protein.     30   2.9  
AY003823-1|AAK11792.1|  110|Homo sapiens immunoglobulin heavy ch...    29   6.7  

>Y17394-1|CAA76761.1|  197|Homo sapiens prefoldin subunit 3 protein.
          Length = 197

 Score =  141 bits (341), Expect = 1e-33
 Identities = 62/97 (63%), Positives = 79/97 (81%)
 Frame = -3

Query: 426 IEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMET 247
           ++K KE    +ET+FLL+D ++ KA+VPPT  VCLWLGANVMLEY +++A+ LL  N+ T
Sbjct: 91  MQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLST 150

Query: 246 AQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 136
           A +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 151 ATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187


>U96759-1|AAC23907.1|  160|Homo sapiens von Hippel-Lindau binding
           protein protein.
          Length = 160

 Score =  141 bits (341), Expect = 1e-33
 Identities = 62/97 (63%), Positives = 79/97 (81%)
 Frame = -3

Query: 426 IEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMET 247
           ++K KE    +ET+FLL+D ++ KA+VPPT  VCLWLGANVMLEY +++A+ LL  N+ T
Sbjct: 54  MQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLST 113

Query: 246 AQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 136
           A +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 114 ATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 150


>U56833-1|AAC50617.1|  166|Homo sapiens VHL binding protein-1
           protein.
          Length = 166

 Score =  141 bits (341), Expect = 1e-33
 Identities = 62/97 (63%), Positives = 79/97 (81%)
 Frame = -3

Query: 426 IEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMET 247
           ++K KE    +ET+FLL+D ++ KA+VPPT  VCLWLGANVMLEY +++A+ LL  N+ T
Sbjct: 60  MQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLST 119

Query: 246 AQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 136
           A +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 120 ATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 156


>CR541932-1|CAG46730.1|  160|Homo sapiens VBP1 protein.
          Length = 160

 Score =  141 bits (341), Expect = 1e-33
 Identities = 62/97 (63%), Positives = 79/97 (81%)
 Frame = -3

Query: 426 IEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMET 247
           ++K KE    +ET+FLL+D ++ KA+VPPT  VCLWLGANVMLEY +++A+ LL  N+ T
Sbjct: 54  MQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLST 113

Query: 246 AQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 136
           A +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 114 ATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 150


>BT019604-1|AAV38411.1|  197|Homo sapiens von Hippel-Lindau binding
           protein 1 protein.
          Length = 197

 Score =  141 bits (341), Expect = 1e-33
 Identities = 62/97 (63%), Positives = 79/97 (81%)
 Frame = -3

Query: 426 IEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMET 247
           ++K KE    +ET+FLL+D ++ KA+VPPT  VCLWLGANVMLEY +++A+ LL  N+ T
Sbjct: 91  MQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLST 150

Query: 246 AQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 136
           A +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 151 ATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187


>BC046094-1|AAH46094.1|  197|Homo sapiens von Hippel-Lindau binding
           protein 1 protein.
          Length = 197

 Score =  141 bits (341), Expect = 1e-33
 Identities = 62/97 (63%), Positives = 79/97 (81%)
 Frame = -3

Query: 426 IEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMET 247
           ++K KE    +ET+FLL+D ++ KA+VPPT  VCLWLGANVMLEY +++A+ LL  N+ T
Sbjct: 91  MQKKKESTNSMETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLST 150

Query: 246 AQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 136
           A +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 151 ATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187


>AL356738-8|CAI41469.1|  197|Homo sapiens von Hippel-Lindau binding
           protein 1 protein.
          Length = 197

 Score =  140 bits (338), Expect = 2e-33
 Identities = 61/97 (62%), Positives = 79/97 (81%)
 Frame = -3

Query: 426 IEKLKEQKEEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMET 247
           ++K KE    +ET+FLL+D ++ KA+VPPT  +CLWLGANVMLEY +++A+ LL  N+ T
Sbjct: 91  MQKKKESTNSMETRFLLADNLYCKASVPPTDKMCLWLGANVMLEYDIDEAQALLEKNLST 150

Query: 246 AQENLNQVEHDLDFLRDQCTTTEVNMARVYNWDVKKR 136
           A +NL+ +E DLDFLRDQ TTTEVNMARVYNWDVK+R
Sbjct: 151 ATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVKRR 187


>AB040901-1|BAA95992.1|  985|Homo sapiens KIAA1468 protein protein.
          Length = 985

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = -3

Query: 354 ANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQ 193
           +N+PPT         N ML   LED   LL +   +  E + +++ ++DFL+++
Sbjct: 76  SNLPPTLETPQ-PAENSMLVQKLEDKISLLNSEKWSLMEQIRRLKSEMDFLKNE 128


>AY003823-1|AAK11792.1|  110|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 110

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 82  HIQLLLNLTSGNATRSCLAFLHIPVVNSSHIHFGSGTLIS 201
           ++Q+ +  T   A   C  F HI VV     ++G GTL++
Sbjct: 60  YLQMNILKTEDTAVYYCTTFSHIVVVTDPFDYWGQGTLVT 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,636,450
Number of Sequences: 237096
Number of extensions: 1068790
Number of successful extensions: 2416
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2416
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)