Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l05f
         (472 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   0.71 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   0.71 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   0.71 
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              23   1.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   3.8  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   5.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   5.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   5.0  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -3

Query: 158 FFSIFKTILQHY 123
           FFSI+KTIL +Y
Sbjct: 417 FFSIYKTILDYY 428


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -3

Query: 158 FFSIFKTILQHY 123
           FFSI+KTIL +Y
Sbjct: 417 FFSIYKTILDYY 428


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -3

Query: 158 FFSIFKTILQHY 123
           FFSI+KTIL +Y
Sbjct: 43  FFSIYKTILDYY 54


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 69  VKANVPPTKSVCLWLGANVMLEYS 140
           +K   PP K   +W+G +++   S
Sbjct: 102 IKIIAPPEKKYSVWIGGSILASLS 125


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = +3

Query: 135 YSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNW 278
           + L   E +LT      Q N   +  +LD + D+    +  M  + NW
Sbjct: 269 FELVTVEPILTERPSDRQRNEILLSDELDSVDDRTLRLKGQMIYMDNW 316


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 401 YLQMCFVFIMNLL 363
           YL MCFVF+   L
Sbjct: 307 YLVMCFVFVFAAL 319


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 147 DAEKLLTTNMETAQENLNQVEHDLD 221
           +A+  LT N+E   + L Q   +LD
Sbjct: 350 EADYKLTRNLELLTDKLQQTYRELD 374


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 147 DAEKLLTTNMETAQENLNQVEHDLD 221
           +A+  LT N+E   + L Q   +LD
Sbjct: 350 EADYKLTRNLELLTDKLQQTYRELD 374


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 419 VPHDIAYLQMCFVFIMNL 366
           + HD+ YLQ  F   M +
Sbjct: 528 IKHDMVYLQKYFYLFMEM 545


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 419 VPHDIAYLQMCFVFIMNL 366
           + HD+ YLQ  F   M +
Sbjct: 528 IKHDMVYLQKYFYLFMEM 545


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 390 HLQVCNVMRNYY 425
           H++V  ++RNYY
Sbjct: 383 HVEVARLIRNYY 394


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 390 HLQVCNVMRNYY 425
           H++V  ++RNYY
Sbjct: 383 HVEVARLIRNYY 394


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 153 EKLLTTNMETAQENLNQVEHDLDFLRDQC 239
           E ++T         L +++H+L+ L D C
Sbjct: 302 ENVVTDKKSKVNFALPELQHNLNILVDMC 330


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,088
Number of Sequences: 438
Number of extensions: 2549
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)