Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l04r
(559 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023029-1|AAY55445.1| 112|Drosophila melanogaster IP04046p pro... 31 1.1
AE013599-1627|AAF58432.1| 112|Drosophila melanogaster CG13323-P... 31 1.1
AY102693-1|AAM27522.1| 433|Drosophila melanogaster LD45181p pro... 30 1.8
AE014297-1932|AAF55129.1| 433|Drosophila melanogaster CG6912-PA... 30 1.8
AE013599-1628|AAF58431.1| 112|Drosophila melanogaster CG13324-P... 30 1.8
Y09063-1|CAA70284.1| 653|Drosophila melanogaster 75kDa subunit ... 30 2.4
BT011089-1|AAR82755.1| 770|Drosophila melanogaster RE66734p pro... 30 2.4
AY074995-1|AAL75815.1| 514|Drosophila melanogaster NADH-ubiquin... 30 2.4
AY074994-1|AAL75814.1| 514|Drosophila melanogaster NADH-ubiquin... 30 2.4
AE014298-1159|AAN09230.1| 731|Drosophila melanogaster CG2286-PB... 30 2.4
AE014298-1158|AAF46356.1| 731|Drosophila melanogaster CG2286-PA... 30 2.4
BT003453-1|AAO39456.1| 490|Drosophila melanogaster RH40480p pro... 28 7.4
AE014296-1068|AAF50697.2| 490|Drosophila melanogaster CG7018-PA... 28 7.4
AE014296-1683|AAZ66068.1| 179|Drosophila melanogaster CG33702-P... 28 9.8
AE013599-762|AAF59007.1| 746|Drosophila melanogaster CG8181-PA ... 28 9.8
>BT023029-1|AAY55445.1| 112|Drosophila melanogaster IP04046p
protein.
Length = 112
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Frame = -2
Query: 408 GSITSSDRLL-RSFVVSRAATTNSRAVNVRYTAPXXXXXXXXXXXG--STQFASVRRTGG 238
G ++D LL R+ V N VNV Y A + AS G
Sbjct: 25 GRRNNNDYLLSRTTEVRNPIKNNYWNVNVNYPAGFYNISAVIVYDNFKNNSGASPSLYSG 84
Query: 237 GVGFTFVNLQFVNAPRRGFSFTVQVWGR 154
G G+ F + RG + TV++WGR
Sbjct: 85 GPGYRFATVNLRGQVNRGINSTVEIWGR 112
>AE013599-1627|AAF58432.1| 112|Drosophila melanogaster CG13323-PA
protein.
Length = 112
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Frame = -2
Query: 408 GSITSSDRLL-RSFVVSRAATTNSRAVNVRYTAPXXXXXXXXXXXG--STQFASVRRTGG 238
G ++D LL R+ V N VNV Y A + AS G
Sbjct: 25 GRRNNNDYLLSRTTEVRNPIKNNYWNVNVNYPAGFYNISAVIVYDNFKNNSGASPSLYSG 84
Query: 237 GVGFTFVNLQFVNAPRRGFSFTVQVWGR 154
G G+ F + RG + TV++WGR
Sbjct: 85 GPGYRFATVNLRGQVNRGINSTVEIWGR 112
>AY102693-1|AAM27522.1| 433|Drosophila melanogaster LD45181p
protein.
Length = 433
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +2
Query: 158 PQTCTVKLNPLRGAFTN*RFTKVKPTPPPVRRTLANCVDPRTRTALTRLPAGAVYLTLTA 337
P T T P T T T P T P T LTR P G++Y
Sbjct: 117 PTTTTTTTEPTTTTTTT-EPTTTTTTTEPTTTTTTTTTAPPVITELTRCPPGSIYFDSQC 175
Query: 338 RELV 349
R++V
Sbjct: 176 RKIV 179
>AE014297-1932|AAF55129.1| 433|Drosophila melanogaster CG6912-PA
protein.
Length = 433
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = +2
Query: 158 PQTCTVKLNPLRGAFTN*RFTKVKPTPPPVRRTLANCVDPRTRTALTRLPAGAVYLTLTA 337
P T T P T T T P T P T LTR P G++Y
Sbjct: 117 PTTTTTTTEPTTTTTTT-EPTTTTTTTEPTTTTTTTTTAPPVITELTRCPPGSIYFDSQC 175
Query: 338 RELV 349
R++V
Sbjct: 176 RKIV 179
>AE013599-1628|AAF58431.1| 112|Drosophila melanogaster CG13324-PA
protein.
Length = 112
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 261 ASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWGR 154
AS GG G+ F + RG TV++WGR
Sbjct: 77 ASPSLYSGGPGYRFATVNLRGQVNRGIDSTVEIWGR 112
>Y09063-1|CAA70284.1| 653|Drosophila melanogaster 75kDa subunit
NADH:biquinone reductaseprecursor protein.
Length = 653
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 425 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 538
DL LGS + IA T+NRAN++L T G +
Sbjct: 369 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 406
>BT011089-1|AAR82755.1| 770|Drosophila melanogaster RE66734p
protein.
Length = 770
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 425 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 538
DL LGS + IA T+NRAN++L T G +
Sbjct: 408 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 445
>AY074995-1|AAL75815.1| 514|Drosophila melanogaster NADH-ubiquinone
reductase 75 kDasubunit precursor protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 425 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 538
DL LGS + IA T+NRAN++L T G +
Sbjct: 369 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 406
>AY074994-1|AAL75814.1| 514|Drosophila melanogaster NADH-ubiquinone
reductase 75 kDasubunit precursor protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 425 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 538
DL LGS + IA T+NRAN++L T G +
Sbjct: 369 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 406
>AE014298-1159|AAN09230.1| 731|Drosophila melanogaster CG2286-PB,
isoform B protein.
Length = 731
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 425 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 538
DL LGS + IA T+NRAN++L T G +
Sbjct: 369 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 406
>AE014298-1158|AAF46356.1| 731|Drosophila melanogaster CG2286-PA,
isoform A protein.
Length = 731
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 425 DLSVDLGSATSLVDTATIAVNTNNRANFILQETCTGTQ 538
DL LGS + IA T+NRAN++L T G +
Sbjct: 369 DLLNRLGSEVVATEQGFIAGGTDNRANYLLNSTIAGLE 406
>BT003453-1|AAO39456.1| 490|Drosophila melanogaster RH40480p
protein.
Length = 490
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 325 HVDSPRVSCSSTAHNKAP*ESIT*SNTSDTQSVRSISGSGVSHFISRHRDDRGQY 489
H +P S S++ H + SNTS T S SG G S S ++ G +
Sbjct: 216 HAAAPSSSSSASDHQQGRISGSKSSNTSGTGGGASASGGGGSALYSSYKSSWGSH 270
>AE014296-1068|AAF50697.2| 490|Drosophila melanogaster CG7018-PA,
isoform A protein.
Length = 490
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 325 HVDSPRVSCSSTAHNKAP*ESIT*SNTSDTQSVRSISGSGVSHFISRHRDDRGQY 489
H +P S S++ H + SNTS T S SG G S S ++ G +
Sbjct: 216 HAAAPSSSSSASDHQQGRISGSKSSNTSGTGGGASASGGGGSALYSSYKSSWGSH 270
>AE014296-1683|AAZ66068.1| 179|Drosophila melanogaster CG33702-PA
protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = -2
Query: 255 VRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWGR*NAYSGRLHAKTRSFCFFVCTKNSFS 76
VRR+ G+ F + +++ + P F + ++ + N Y L T FC+++ +
Sbjct: 49 VRRSVVGINF-HIAIKY-SQPINKIEFNLSIFRKSNMYRLFLVNHTIDFCYYMRRPEQYP 106
Query: 75 PFFLINDS 52
F++ +DS
Sbjct: 107 IFYMFHDS 114
>AE013599-762|AAF59007.1| 746|Drosophila melanogaster CG8181-PA
protein.
Length = 746
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Frame = +2
Query: 218 TKVKPTPPPVRRTLANCVDPRTRTALTRLPAGAVYLTLTARELV-----VAARLTTKLRK 382
T TP P RRT T T T A T TA+ L+ +A LTT +K
Sbjct: 445 TTTTTTPKPTRRTKPPTTTTTTTTKATTTTTKATTTTTTAKPLITTEPPTSAPLTTTTKK 504
Query: 383 S 385
+
Sbjct: 505 T 505
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,864,310
Number of Sequences: 53049
Number of extensions: 381786
Number of successful extensions: 1102
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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