Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l02r
(684 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC150181-1|AAI50182.1| 1024|Homo sapiens thyrotropin-releasing h... 36 0.10
BC142706-1|AAI42707.1| 1024|Homo sapiens thyrotropin-releasing h... 36 0.10
AY358765-1|AAQ89125.1| 1024|Homo sapiens TRHDE protein. 36 0.10
AF126372-1|AAF13141.1| 1024|Homo sapiens thyrotropin-releasing h... 36 0.10
BC109023-1|AAI09024.1| 990|Homo sapiens laeverin protein. 33 1.3
BC109022-1|AAI09023.1| 990|Homo sapiens laeverin protein. 33 1.3
BC060869-1|AAH60869.1| 979|Homo sapiens FLJ90650 protein protein. 33 1.3
BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm a... 33 1.3
BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm a... 33 1.3
AY560010-1|AAS66719.1| 990|Homo sapiens laeverin protein. 33 1.3
AK075131-1|BAC11422.1| 507|Homo sapiens protein ( Homo sapiens ... 33 1.3
AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein. 33 1.3
>BC150181-1|AAI50182.1| 1024|Homo sapiens thyrotropin-releasing
hormone degrading enzyme protein.
Length = 1024
Score = 36.3 bits (80), Expect = 0.10
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = -3
Query: 682 WNRYLQEDLSSEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNE 503
W ++ SEK ++L C+ D+ LNR L+ +S N ++ + + N
Sbjct: 873 WMKFHSTTAVSEKKILLEALTCSDDRNLLNRLLN--LSLNSEVVLDQDAIDVIIHVARNP 930
Query: 502 INTLRAFQWLRNNVDQATRTLGSV----STILNTIIGRLLNEEQINEVSNWLTANQNTLG 335
A+++ R+ G S +++ + L E ++ E+ N++
Sbjct: 931 HGRDLAWKFFRDKWKILNTRYGEALFMNSKLISGVTEFLNTEGELKELKNFMKNYDGVAA 990
Query: 334 ATYSTALRAIETTRSNLVW 278
A++S RA+ET +N+ W
Sbjct: 991 ASFS---RAVETVEANVRW 1006
>BC142706-1|AAI42707.1| 1024|Homo sapiens thyrotropin-releasing
hormone degrading enzyme protein.
Length = 1024
Score = 36.3 bits (80), Expect = 0.10
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = -3
Query: 682 WNRYLQEDLSSEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNE 503
W ++ SEK ++L C+ D+ LNR L+ +S N ++ + + N
Sbjct: 873 WMKFHSTTAVSEKKILLEALTCSDDRNLLNRLLN--LSLNSEVVLDQDAIDVIIHVARNP 930
Query: 502 INTLRAFQWLRNNVDQATRTLGSV----STILNTIIGRLLNEEQINEVSNWLTANQNTLG 335
A+++ R+ G S +++ + L E ++ E+ N++
Sbjct: 931 HGRDLAWKFFRDKWKILNTRYGEALFMNSKLISGVTEFLNTEGELKELKNFMKNYDGVAA 990
Query: 334 ATYSTALRAIETTRSNLVW 278
A++S RA+ET +N+ W
Sbjct: 991 ASFS---RAVETVEANVRW 1006
>AY358765-1|AAQ89125.1| 1024|Homo sapiens TRHDE protein.
Length = 1024
Score = 36.3 bits (80), Expect = 0.10
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = -3
Query: 682 WNRYLQEDLSSEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNE 503
W ++ SEK ++L C+ D+ LNR L+ +S N ++ + + N
Sbjct: 873 WMKFHSTTAVSEKKILLEALTCSDDRNLLNRLLN--LSLNSEVVLDQDAIDVIIHVARNP 930
Query: 502 INTLRAFQWLRNNVDQATRTLGSV----STILNTIIGRLLNEEQINEVSNWLTANQNTLG 335
A+++ R+ G S +++ + L E ++ E+ N++
Sbjct: 931 HGRDLAWKFFRDKWKILNTRYGEALFMYSKLISGVTEFLNTEGELKELKNFMKNYDGVAA 990
Query: 334 ATYSTALRAIETTRSNLVW 278
A++S RA+ET +N+ W
Sbjct: 991 ASFS---RAVETVEANVRW 1006
>AF126372-1|AAF13141.1| 1024|Homo sapiens thyrotropin-releasing
hormone degrading ectoenzyme protein.
Length = 1024
Score = 36.3 bits (80), Expect = 0.10
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = -3
Query: 682 WNRYLQEDLSSEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNE 503
W ++ SEK ++L C+ D+ LNR L+ +S N ++ + + N
Sbjct: 873 WMKFHSTTAVSEKKILLEALTCSDDRNLLNRLLN--LSLNSEVVLDQDAIDVIIHVARNP 930
Query: 502 INTLRAFQWLRNNVDQATRTLGSV----STILNTIIGRLLNEEQINEVSNWLTANQNTLG 335
A+++ R+ G S +++ + L E ++ E+ N++
Sbjct: 931 HGRDLAWKFFRDKWKILNTRYGEALFMNSKLISGVTEFLNTEGELKELKNFMKNYDGVAA 990
Query: 334 ATYSTALRAIETTRSNLVW 278
A++S RA+ET +N+ W
Sbjct: 991 ASFS---RAVETVEANVRW 1006
>BC109023-1|AAI09024.1| 990|Homo sapiens laeverin protein.
Length = 990
Score = 32.7 bits (71), Expect = 1.3
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = -3
Query: 679 NRYLQEDLSSEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEI 500
N Y EK+ + C+ D LNR+++ +S + N + + S+E+
Sbjct: 844 NTYTNTTNKEEKIQLAYAMSCSKDPWILNRYMEYAIS-TSPFTSNETN--IIEVVASSEV 900
Query: 499 NTLRAFQWLRNNVDQATRTLGSVSTI-LNTIIGRLLNEE-QINEVSNWLT 356
A +L NN ++ G+ S I L IGR + + QI E+ + +
Sbjct: 901 GRYVAKDFLVNNWQAVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFS 950
>BC109022-1|AAI09023.1| 990|Homo sapiens laeverin protein.
Length = 990
Score = 32.7 bits (71), Expect = 1.3
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = -3
Query: 679 NRYLQEDLSSEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEI 500
N Y EK+ + C+ D LNR+++ +S + N + + S+E+
Sbjct: 844 NTYTNTTNKEEKIQLAYAMSCSKDPWILNRYMEYAIS-TSPFTSNETN--IIEVVASSEV 900
Query: 499 NTLRAFQWLRNNVDQATRTLGSVSTI-LNTIIGRLLNEE-QINEVSNWLT 356
A +L NN ++ G+ S I L IGR + + QI E+ + +
Sbjct: 901 GRYVAKDFLVNNWQAVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFS 950
>BC060869-1|AAH60869.1| 979|Homo sapiens FLJ90650 protein protein.
Length = 979
Score = 32.7 bits (71), Expect = 1.3
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = -3
Query: 679 NRYLQEDLSSEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEI 500
N Y EK+ + C+ D LNR+++ +S + N + + S+E+
Sbjct: 833 NTYTNTTNKEEKIQLAYAMSCSKDPWILNRYMEYAIS-TSPFTSNETN--IIEVVASSEV 889
Query: 499 NTLRAFQWLRNNVDQATRTLGSVSTI-LNTIIGRLLNEE-QINEVSNWLT 356
A +L NN ++ G+ S I L IGR + + QI E+ + +
Sbjct: 890 GRYVAKDFLVNNWQAVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFS 939
>BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 32.7 bits (71), Expect = 1.3
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 1/143 (0%)
Frame = -2
Query: 497 HSESFPMAQEQR*PGDQNPRQRFHDLEHNNWTSPQRGTDK*GFELVDGQPKHPGSHIQHG 318
+SESF ++ G Q+ + H + H W + G+ +H +H QHG
Sbjct: 187 YSESFHHSEASHLSGLQHDESQHHQVPHRGWPHHHQVHHH-------GRSRHHEAH-QHG 238
Query: 317 ATSYRDHAVEPRLVTAENFR-IHELLRVRLRGGCH*GDHRGTAYCSPDRPTNRSSSCHPC 141
+ + + P R I + H GDH + Y D P + H
Sbjct: 239 KSPHHGETISPHSSVGSYQRGISDY-----HSEYHQGDHHPSEYHHGDHPHHTQHHYHQT 293
Query: 140 TRFSERRSPKLYHTDHHFSCQFG 72
R + + +H +H S G
Sbjct: 294 HRHRDYHQHQDHHGAYHSSYLHG 316
>BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 32.7 bits (71), Expect = 1.3
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 1/143 (0%)
Frame = -2
Query: 497 HSESFPMAQEQR*PGDQNPRQRFHDLEHNNWTSPQRGTDK*GFELVDGQPKHPGSHIQHG 318
+SESF ++ G Q+ + H + H W + G+ +H +H QHG
Sbjct: 187 YSESFHHSEASHLSGLQHDESQHHQVPHRGWPHHHQVHHH-------GRSRHHEAH-QHG 238
Query: 317 ATSYRDHAVEPRLVTAENFR-IHELLRVRLRGGCH*GDHRGTAYCSPDRPTNRSSSCHPC 141
+ + + P R I + H GDH + Y D P + H
Sbjct: 239 KSPHHGETISPHSSVGSYQRGISDY-----HSEYHQGDHHPSEYHHGDHPHHTQHHYHQT 293
Query: 140 TRFSERRSPKLYHTDHHFSCQFG 72
R + + +H +H S G
Sbjct: 294 HRHRDYHQHQDHHGAYHSSYLHG 316
>AY560010-1|AAS66719.1| 990|Homo sapiens laeverin protein.
Length = 990
Score = 32.7 bits (71), Expect = 1.3
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = -3
Query: 679 NRYLQEDLSSEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEI 500
N Y EK+ + C+ D LNR+++ +S + N + + S+E+
Sbjct: 844 NTYTNTTNKEEKIQLAYAMSCSKDPWILNRYMEYAIS-TSPFTSNETN--IIEVVASSEV 900
Query: 499 NTLRAFQWLRNNVDQATRTLGSVSTI-LNTIIGRLLNEE-QINEVSNWLT 356
A +L NN ++ G+ S I L IGR + + QI E+ + +
Sbjct: 901 GRYVAKDFLVNNWQAVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFS 950
>AK075131-1|BAC11422.1| 507|Homo sapiens protein ( Homo sapiens
cDNA FLJ90650 fis, clone PLACE1004450, weakly similar to
AMINOPEPTIDASE N (EC 3.4.11.2). ).
Length = 507
Score = 32.7 bits (71), Expect = 1.3
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = -3
Query: 679 NRYLQEDLSSEKVVMLNVAGCTTDQASLNRFLDAIVSGNDDIRPQDYNAALTSAITSNEI 500
N Y EK+ + C+ D LNR+++ +S + N + + S+E+
Sbjct: 361 NTYTNTTNKEEKIQLAYAMSCSKDPWILNRYMEYAIS-TSPFTSNETN--IIEVVASSEV 417
Query: 499 NTLRAFQWLRNNVDQATRTLGSVSTI-LNTIIGRLLNEE-QINEVSNWLT 356
A +L NN ++ G+ S I L IGR + + QI E+ + +
Sbjct: 418 GRYVAKDFLVNNWQAVSKRYGTQSLINLIYTIGRTVTTDLQIVELQQFFS 467
>AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein.
Length = 780
Score = 32.7 bits (71), Expect = 1.3
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 1/143 (0%)
Frame = -2
Query: 497 HSESFPMAQEQR*PGDQNPRQRFHDLEHNNWTSPQRGTDK*GFELVDGQPKHPGSHIQHG 318
+SESF ++ G Q+ + H + H W + G+ +H +H QHG
Sbjct: 187 YSESFHHSEASHLSGLQHDESQHHQVPHRGWPHHHQVHHH-------GRSRHHEAH-QHG 238
Query: 317 ATSYRDHAVEPRLVTAENFR-IHELLRVRLRGGCH*GDHRGTAYCSPDRPTNRSSSCHPC 141
+ + + P R I + H GDH + Y D P + H
Sbjct: 239 KSPHHGETISPHSSVGSYQRGISDY-----HSEYHQGDHHPSEYHHGDHPHHTQHHYHQT 293
Query: 140 TRFSERRSPKLYHTDHHFSCQFG 72
R + + +H +H S G
Sbjct: 294 HRHRDYHQHQDHHGAYHSSYLHG 316
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,250,098
Number of Sequences: 237096
Number of extensions: 1861853
Number of successful extensions: 4446
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4440
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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