Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l02f
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 56 2e-08
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 56 2e-08
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 37 0.009
L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein ... 33 0.18
AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell... 33 0.18
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z77665-4|CAB01222.1| 126|Caenorhabditis elegans Hypothetical pr... 27 9.1
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 27 9.1
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 27 9.1
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 56.0 bits (129), Expect = 2e-08
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Frame = +2
Query: 161 RLPTTTRPRHYQVTLTPYFDVVPANVNPFTFDGEVTIYTSPTVANVNEVV-IHCNDLTIQ 337
RLPT P HY V L+P +N F+FDG TI T+ +V+ +H L IQ
Sbjct: 15 RLPTFAEPTHYNVRLSPC-------LNQFSFDGHATI--DVTIKEATDVLKVHAQSLLIQ 65
Query: 338 SLSIGYQSGTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKSTFRGNLQTNMR 517
S+S+ Q G D + + +T + + + L I+ + + + F G L MR
Sbjct: 66 SVSLITQPG----DASKSLET-SYDDKLNILTIKLPTTMQPQKVQL-DFKFVGELNDKMR 119
Query: 518 GFYRSWYVDSTG 553
GFYRS Y D G
Sbjct: 120 GFYRSQYKDKNG 131
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 56.0 bits (129), Expect = 2e-08
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Frame = +2
Query: 161 RLPTTTRPRHYQVTLTPYFDVVPANVNPFTFDGEVTIYTSPTVANVNEVV-IHCNDLTIQ 337
RLPT P HY V L+P +N F+FDG TI T+ +V+ +H L IQ
Sbjct: 79 RLPTFAEPTHYNVRLSPC-------LNQFSFDGHATI--DVTIKEATDVLKVHAQSLLIQ 129
Query: 338 SLSIGYQSGTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKSTFRGNLQTNMR 517
S+S+ Q G D + + +T + + + L I+ + + + F G L MR
Sbjct: 130 SVSLITQPG----DASKSLET-SYDDKLNILTIKLPTTMQPQKVQL-DFKFVGELNDKMR 183
Query: 518 GFYRSWYVDSTG 553
GFYRS Y D G
Sbjct: 184 GFYRSQYKDKNG 195
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 38.3 bits (85), Expect = 0.004
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Frame = +2
Query: 161 RLPTTTRPRHYQVTLTPYFD--VVPANVNPFTFDGEVTIYTSPTVANVNEVVIHCNDLTI 334
RLPT+ P YQ+T+ Y A+ N TF+G+V I + T ++ +V ++ DL
Sbjct: 73 RLPTSVSPISYQLTVKTYLPGYGYTADKNNLTFEGQVLIELNIT-KSIKKVSLNSKDLNY 131
Query: 335 QSLSIGYQS-GTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKSTFRGNLQTN 511
I S N I T F + E + +K F L+T+
Sbjct: 132 TEEFIKKSSILVNGKSIAFTLDDKQSTHEKIFFNL--DETVEPTTSATLKVAFGAPLRTD 189
Query: 512 MRGFYRSWYVDSTG 553
M G Y++ Y +S G
Sbjct: 190 MSGLYQTTYTNSKG 203
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 38.3 bits (85), Expect = 0.004
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Frame = +2
Query: 161 RLPTTTRPRHYQVTLTPYFD--VVPANVNPFTFDGEVTIYTSPTVANVNEVVIHCNDLTI 334
RLPT+ P YQ+T+ Y A+ N TF+G+V I + T ++ +V ++ DL
Sbjct: 85 RLPTSVSPISYQLTVKTYLPGYGYTADKNNLTFEGQVLIELNIT-KSIKKVSLNSKDLNY 143
Query: 335 QSLSIGYQS-GTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKSTFRGNLQTN 511
I S N I T F + E + +K F L+T+
Sbjct: 144 TEEFIKKSSILVNGKSIAFTLDDKQSTHEKIFFNL--DETVEPTTSATLKVAFGAPLRTD 201
Query: 512 MRGFYRSWYVDSTG 553
M G Y++ Y +S G
Sbjct: 202 MSGLYQTTYTNSKG 215
>Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 37.1 bits (82), Expect = 0.009
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Frame = +2
Query: 134 ARMLRDPAFRLPTTTRPRHYQVTLTPYFDVV--PANVNPFTFDGEVTIYTSPTVANVNEV 307
AR+ ++RLP P HY + + Y A+ N TF+G V I +++
Sbjct: 22 ARIADVASYRLPRHVSPSHYDIHIKTYLPGYGWKADENKITFEGNVNILLD-IKETTDKL 80
Query: 308 VIHCNDLTIQSLSIGYQSGTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKST 487
V+H + L I +S +QS V I+ + + FL + + I+
Sbjct: 81 VLHSSSLNI--ISATFQSDEQNVSIS----HWNVQTESQFLTFYLNNTVKVQSSAGIQIN 134
Query: 488 FRGNLQTNMRGFY 526
F+G ++T+ G +
Sbjct: 135 FQGKVRTDGLGLF 147
>L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein
protein.
Length = 237
Score = 32.7 bits (71), Expect = 0.18
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 31 NGISLVLLPRGRSLLTNFTNVKPHTSTRR*VG*ICEDASGSGVSSSNDHTPETLSSNTDS 210
N +SL+L+P +NF + PH+ T + SGSG SSS TPE +++ S
Sbjct: 179 NPLSLLLMPHFLKNSSNFESSTPHSET--------SEISGSGSSSSKTPTPEAGFNSSFS 230
Query: 211 I 213
I
Sbjct: 231 I 231
>AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell
lineage protein 31 protein.
Length = 237
Score = 32.7 bits (71), Expect = 0.18
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 31 NGISLVLLPRGRSLLTNFTNVKPHTSTRR*VG*ICEDASGSGVSSSNDHTPETLSSNTDS 210
N +SL+L+P +NF + PH+ T + SGSG SSS TPE +++ S
Sbjct: 179 NPLSLLLMPHFLKNSSNFESSTPHSET--------SEISGSGSSSSKTPTPEAGFNSSFS 230
Query: 211 I 213
I
Sbjct: 231 I 231
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +2
Query: 83 SLTLSPIPVPEDEWVEFARMLRDPAFRLPTTTRPRHYQVTLTPYFDVVPANVNPFTFDGE 262
+L +SP+ PED R+ DP F P +T + V + P P + FT +
Sbjct: 99 TLRVSPV-TPEDSGTYRCRLETDPLFSSPQSTATQELAVMVKPVAPSSP-EIKTFT-NRS 155
Query: 263 VTIYTSPTVANVNEVVI 313
+T+ + A + ++
Sbjct: 156 ITLVWTHNAARAHRPIL 172
>Z77665-4|CAB01222.1| 126|Caenorhabditis elegans Hypothetical
protein K02E11.5 protein.
Length = 126
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 358 LVAN*EALNGQVVAVDNNFVNVCYCGRSVNSNFAVKSEGVHVGWYNIEIWSQCYLIMSRA 179
+V + + L GQ+ A N V++ +N+ + + W I+ C +
Sbjct: 15 VVTDAQMLGGQIYAKINATVSISL---PQVANYRREIQNEKDVWEE-HIYRVCNGKNKKT 70
Query: 178 CGRW---KTKRRIPKHPRKFN 125
CG W KTK++IP P +N
Sbjct: 71 CGYWENVKTKKKIPSGPTNYN 91
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 535 PTSVKASHVSLQISSKSAFNYVFSIEY 455
PTS+K +H + SK ++ +F++EY
Sbjct: 280 PTSLKVTHRQITEGSKMSYAKIFTMEY 306
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 535 PTSVKASHVSLQISSKSAFNYVFSIEY 455
PTS+K +H + SK ++ +F++EY
Sbjct: 303 PTSLKVTHRQITEGSKMSYAKIFTMEY 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,660,613
Number of Sequences: 27780
Number of extensions: 268843
Number of successful extensions: 775
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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