Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11l02f
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g33090.1 68417.m04715 aminopeptidase M similar to SP|Q11011 P... 37 0.010
At3g24982.1 68416.m03125 leucine-rich repeat family protein, 5' ... 30 0.91
At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kina... 30 1.2
At5g44070.1 68418.m05392 phytochelatin synthase 1 (PCS1) identic... 28 3.7
At1g18650.1 68414.m02325 glycosyl hydrolase family protein 17 si... 28 3.7
At4g13130.1 68417.m02045 DC1 domain-containing protein contains ... 28 4.9
At1g28000.1 68414.m03429 hypothetical protein 28 4.9
At5g55350.1 68418.m06897 membrane bound O-acyl transferase (MBOA... 27 6.4
At3g02320.1 68416.m00214 N2,N2-dimethylguanosine tRNA methyltran... 27 6.4
At5g11210.1 68418.m01310 glutamate receptor family protein (GLR2... 27 8.5
At5g11180.1 68418.m01307 glutamate receptor family protein (GLR2... 27 8.5
At3g24240.1 68416.m03042 leucine-rich repeat transmembrane prote... 27 8.5
>At4g33090.1 68417.m04715 aminopeptidase M similar to SP|Q11011
Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA)
{Mus musculus}; contains Pfam profile PF01433: Peptidase
family M1
Length = 879
Score = 36.7 bits (81), Expect = 0.010
Identities = 33/126 (26%), Positives = 54/126 (42%)
Frame = +2
Query: 161 RLPTTTRPRHYQVTLTPYFDVVPANVNPFTFDGEVTIYTSPTVANVNEVVIHCNDLTIQS 340
RLP P+ Y + L P D++ TF G V I VA+ +V++ DL++
Sbjct: 9 RLPKFAVPKRYDLRLNP--DLIAC-----TFTGTVAIDLD-IVADTRFIVLNAADLSVND 60
Query: 341 LSIGYQSGTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKSTFRGNLQTNMRG 520
S+ + ++ + A E L ++ + ++K F G L M+G
Sbjct: 61 ASVSFTPPSSSKALAAPKVVLFEEDEILVLEFGE---ILPHGVGVLKLGFNGVLNDKMKG 117
Query: 521 FYRSWY 538
FYRS Y
Sbjct: 118 FYRSTY 123
>At3g24982.1 68416.m03125 leucine-rich repeat family protein, 5'
fragment contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611 (19 copies); contains
similarity to GB:AAD13301 from [Lycopersicon esculentum]
Length = 681
Score = 30.3 bits (65), Expect = 0.91
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 293 NVNEVVIHCNDLTIQSLSIGYQSGTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREY 472
++ +++ N+ T S+S + N+ ++ + F ++PFSF + ALVL+
Sbjct: 130 HLRSLLLPHNNFTSSSISSKFGMLNNLEVLSLSSSGFLAQVPFSFSNLSMLSALVLSNND 189
Query: 473 IIKS-TFRGNLQ 505
+ S +F NL+
Sbjct: 190 LTGSLSFARNLR 201
>At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118: TCP-1/cpn60
chaperonin family
Length = 1791
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 116 DEWVEFARMLRDPAFRLPTTTRPRHY----QVTLTPYFDVVPANVNP 244
+ WV+F +L P PT P+ Y + +T YF +VP +P
Sbjct: 1721 ESWVKFTGILGGPKNEAPTVISPKQYKRRFRKAMTTYFLMVPDQWSP 1767
>At5g44070.1 68418.m05392 phytochelatin synthase 1 (PCS1) identical
to phytochelatin synthase [Arabidopsis thaliana]
gi|18254401|gb|AAL66747; identical to cDNA
phytochelatin synthase, GI:18254400
Length = 485
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +2
Query: 113 EDEWVEFARMLRDPAFRLPTTTRPRHYQVTLTPYFDVVPANVNPF 247
++ W+E A+ L++ RL ++ + ++ F +P+N N F
Sbjct: 233 DESWIEIAKYLKEDVPRLVSSQHVDSVEKIISVVFKSLPSNFNQF 277
>At1g18650.1 68414.m02325 glycosyl hydrolase family protein 17
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]; C-terminal homology only
Length = 184
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 83 SLTLSPIPVPEDEWVEFARMLRDPAFRLPTTTRPRHYQVTLTPYFDV-VPANVNP 244
S T P P + P+ R+PTTT R Y +T + + +P+ +NP
Sbjct: 98 SYTTCPFPASASGSGTTTPVTTTPSTRVPTTTNTRPYTITPSTGGGLGIPSGINP 152
>At4g13130.1 68417.m02045 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 767
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -3
Query: 283 GRSVNSNFAVKSEGVHVGWYNIEIWSQCYLIMSRACGRWKTKRRIPKHPRKFN 125
GR + N ++ + + NI QC I+ C + K P HP K N
Sbjct: 469 GRDYDENKQCQACITPIYFGNIYSCMQCNFILHEECANFSRKIHNPIHPHKLN 521
>At1g28000.1 68414.m03429 hypothetical protein
Length = 349
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 543 STYQLL*KPLMLVCRFPLKVLLIMYSLLSTKASVVLILRKLK 418
+TYQ + ML+ +P ++ +Y+LL K + ILR++K
Sbjct: 117 ATYQTMRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMK 158
>At5g55350.1 68418.m06897 membrane bound O-acyl transferase (MBOAT)
family protein / wax synthase-related contains
similarity to wax synthase wax synthase - Simmondsia
chinensis, PID:g5020219 similar to wax synthase
[gi:5020219] from Simmondsia chinensis
Length = 345
Score = 27.5 bits (58), Expect = 6.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 304 SCYPLQRLDHSKPLNWLPKW 363
+C+P++ + KP N +PKW
Sbjct: 98 TCFPIKLQQNPKPQNQMPKW 117
>At3g02320.1 68416.m00214 N2,N2-dimethylguanosine tRNA
methyltransferase family protein similar to
N2,N2-dimethylguanosine tRNA methyltransferase [Homo
sapiens] GI:11066198; contains Pfam profile PF02005:
N2,N2-dimethylguanosine tRNA methyltransferase
Length = 599
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 331 GQVVAVDNNFVNVCYCGRSVNSNFAV 254
GQVVA+DN+ +V C R++ N +V
Sbjct: 156 GQVVALDNDLASVEACQRNIKFNGSV 181
>At5g11210.1 68418.m01310 glutamate receptor family protein (GLR2.5)
plant glutamate receptor family, PMID:11379626
Length = 829
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 266 TIYTSPTVANVNEVVIHCNDLTIQSLSIGYQSGT 367
T+ + TV + V H +DL ++IGYQ+G+
Sbjct: 593 TLTSMLTVQELRPTVRHMDDLRKSGVNIGYQTGS 626
>At5g11180.1 68418.m01307 glutamate receptor family protein (GLR2.6)
plant glutamate receptor family, PMID:11379626
Length = 906
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 266 TIYTSPTVANVNEVVIHCNDLTIQSLSIGYQSGT 367
T+ + TV + V H +DL ++IGYQ+G+
Sbjct: 610 TLTSMLTVQELRPTVRHMDDLRNSGVNIGYQTGS 643
>At3g24240.1 68416.m03042 leucine-rich repeat transmembrane protein
kinase, putative similar to CLV1 receptor kinase
GB:AAB58929 from [Arabidopsis thaliana]
Length = 1141
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 344 SIGYQSGTNVVDITATGQTFACEMPFSFLRIRTTEALVLN 463
S+G G V+D+++ G ++P+S ++R E L+LN
Sbjct: 124 SLGDCLGLKVLDLSSNG--LVGDIPWSLSKLRNLETLILN 161
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,087,412
Number of Sequences: 28952
Number of extensions: 255799
Number of successful extensions: 841
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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