Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11l01r
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.18 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.42 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.3  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +3

Query: 45  FVLAFSAFFLWMYSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRXNFLRTLC-LCTH 221
           + L FS    ++     + F +++   F  SE +  +++     YFR +  +T C L T 
Sbjct: 353 YTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRETYFRLSKTKTFCTLVTA 412

Query: 222 SSFCGI 239
             +C +
Sbjct: 413 LVYCSL 418


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +2

Query: 239 TRIGSTSSLTKATVTTLSTCLCVFADTGA 325
           TRI ST S    T  TL TC  V    GA
Sbjct: 42  TRISSTVSRNTDTYPTLETCRLVCGKYGA 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 362  WSRHQETCSSPLPRPCPQKHRGT*KGSSLW 273
            W++ ++ C  P    C +K  G    +S W
Sbjct: 1137 WNKERKICDWPKSAKCEEKKPGHKPSTSSW 1166


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 362 ILDHLTDVLSGVGVCDLI 415
           IL H+    SG+ +CDLI
Sbjct: 252 ILWHIVGTFSGIFLCDLI 269


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 205 FVFVPIVPSVAYXH 246
           F   PIVP  AY H
Sbjct: 90  FYSTPIVPHFAYNH 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,495
Number of Sequences: 336
Number of extensions: 2898
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)