Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k24r
(710 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 28 0.065
AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory recept... 26 0.35
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 24 1.4
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 23 1.9
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 1.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 1.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 1.9
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 2.5
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 23 2.5
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 23 2.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.7
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 7.5
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 7.5
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 28.3 bits (60), Expect = 0.065
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 561 VISVLEFHF-QNIKLWSQLFFIF*EPSMIHRLK 656
++ +++HF +KLWSQLF F ++H +K
Sbjct: 83 IVRFMKYHFFGTLKLWSQLFSTFAGIEVLHVVK 115
>AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory receptor
candidate 58 protein.
Length = 376
Score = 25.8 bits (54), Expect = 0.35
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 355 LNFLKGGRITEPLLIIQNLPVLTLAKSPLMMASLCTITLPCKTIF*EPQSTV 510
LNF + L + L + +L ++ + + ++C + L C + E Q TV
Sbjct: 255 LNFFTSTLEIDNLYLKHKLEISSLVQTAITLVAMCGLVLICDSAKSESQQTV 306
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 227 CVLKDCCMIEDNSVLPAE 174
CVL DC ED + +P +
Sbjct: 168 CVLPDCFCSEDGTTIPGD 185
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 23.4 bits (48), Expect = 1.9
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 408 STCFNISQISSYDGITLYDHF--TV*NNILRATEHCLSAYFITGGSFYIFR 554
+ C I I S G+ Y F V + + +ATEH + + G F +FR
Sbjct: 186 AACGRIHPIGS-GGMVWYQMFEYAVGHWMQKATEHVIGCVLCSPGCFSLFR 235
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.4 bits (48), Expect = 1.9
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 408 STCFNISQISSYDGITLYDHF--TV*NNILRATEHCLSAYFITGGSFYIFR 554
+ C I I S G+ Y F V + + +ATEH + + G F +FR
Sbjct: 500 AACGRIHPIGS-GGMVWYQMFEYAVGHWMQKATEHVIGCVLCSPGCFSLFR 549
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.4 bits (48), Expect = 1.9
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 408 STCFNISQISSYDGITLYDHF--TV*NNILRATEHCLSAYFITGGSFYIFR 554
+ C I I S G+ Y F V + + +ATEH + + G F +FR
Sbjct: 733 AACGRIHPIGS-GGMVWYQMFEYAVGHWMQKATEHVIGCVLCSPGCFSLFR 782
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.4 bits (48), Expect = 1.9
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 408 STCFNISQISSYDGITLYDHF--TV*NNILRATEHCLSAYFITGGSFYIFR 554
+ C I I S G+ Y F V + + +ATEH + + G F +FR
Sbjct: 733 AACGRIHPIGS-GGMVWYQMFEYAVGHWMQKATEHVIGCVLCSPGCFSLFR 782
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 271 PTTAAFTTVFSPTKT*SPICKGKNATPL--LNFLKGGR 378
PTT++ + + SP C G N + + LN L GR
Sbjct: 220 PTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGR 257
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 271 PTTAAFTTVFSPTKT*SPICKGKNATPL--LNFLKGGR 378
PTT++ + + SP C G N + + LN L GR
Sbjct: 9 PTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGR 46
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 271 PTTAAFTTVFSPTKT*SPICKGKNATPL--LNFLKGGR 378
PTT++ + + SP C G N + + LN L GR
Sbjct: 9 PTTSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGR 46
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 492 RATEHCLSAYFITGGSFYIFR 554
+ATEH + + G F +FR
Sbjct: 789 KATEHVIGCVLCSPGCFSLFR 809
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 492 RATEHCLSAYFITGGSFYIFR 554
+ATEH + + G F +FR
Sbjct: 789 KATEHVIGCVLCSPGCFSLFR 809
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 492 RATEHCLSAYFITGGSFYIFR 554
+ATEH + + G F +FR
Sbjct: 789 KATEHVIGCVLCSPGCFSLFR 809
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 492 RATEHCLSAYFITGGSFYIFR 554
+ATEH + + G F +FR
Sbjct: 789 KATEHVIGCVLCSPGCFSLFR 809
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 554 IYCNKCLGVPFSKYKIMVS 610
+YC KC VP K + +V+
Sbjct: 60 LYCMKCECVPLQKKRRIVA 78
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 271 PTTAAFTTVFSPTKT*SPICKGKNATPLLN 360
PTT++ + + SP C G N + +L+
Sbjct: 220 PTTSSSSALESPDPASRSSCLGSNTSSMLS 249
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,948
Number of Sequences: 336
Number of extensions: 3317
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -