Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k22r
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   1.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.8  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 613 WFIVFLYGISC*KCFVSKSI 554
           WF++ LYGI   + F+ K +
Sbjct: 361 WFVLRLYGIENLQAFIRKHV 380


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 3   YITMVQKKSVYSFYYILFKLYFTNSN 80
           Y  +  K+ + S+YY+L  L + N+N
Sbjct: 27  YSLLRVKRMMRSWYYLLTNLTYNNTN 52


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 358 PKMIIKPTVILLQNFYQIIQHFIY 429
           PK+++K  + LL N  + I  F Y
Sbjct: 112 PKLLLKHNLFLLDNIVKPIIAFYY 135


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 372 DYHFRISMTAAHQLNMWESLRLS 304
           ++HF   +T   ++ + ESLRL+
Sbjct: 201 EFHFNKYLTRRRRIEIAESLRLT 223


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 372 DYHFRISMTAAHQLNMWESLRLS 304
           ++HF   +T   ++ + ESLRL+
Sbjct: 201 EFHFNKYLTRRRRIEIAESLRLT 223


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 372 DYHFRISMTAAHQLNMWESLRLS 304
           ++HF   +T   ++ + ESLRL+
Sbjct: 201 EFHFNKYLTRRRRIEIAESLRLT 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,017
Number of Sequences: 336
Number of extensions: 4379
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)