Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k22r
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042912-1|AAH42912.1| 518|Homo sapiens seryl-tRNA synthetase 2... 48 3e-05
AK000457-1|BAA91176.1| 518|Homo sapiens protein ( Homo sapiens ... 48 3e-05
AB029948-1|BAA99557.1| 518|Homo sapiens mitochondrial seryl-tRN... 48 3e-05
AF264627-1|AAG03019.1| 84|Homo sapiens uncharacterized gastric... 41 0.004
BC112201-1|AAI12202.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 36 0.11
BC029930-1|AAH29930.1| 680|Homo sapiens BTAF1 protein protein. 36 0.11
BC001020-1|AAH01020.2| 142|Homo sapiens SARS2 protein protein. 36 0.11
AL365398-1|CAI14103.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 36 0.11
AL359198-2|CAH73478.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 36 0.11
AJ001017-1|CAA04475.1| 1849|Homo sapiens TBP associated factor p... 36 0.11
AF038362-1|AAC04573.1| 1849|Homo sapiens TBP-associated factor 1... 36 0.11
AB208843-1|BAD92080.1| 699|Homo sapiens BTAF1 RNA polymerase II... 36 0.11
AB125267-1|BAD17859.1| 913|Homo sapiens integral membrane prote... 31 3.2
AF245044-1|AAG44481.1| 108|Homo sapiens HT023 protein. 31 5.6
X89814-1|CAA61940.1| 239|Homo sapiens soluble IFN alpha/beta re... 30 7.4
X89772-1|CAA61914.1| 515|Homo sapiens interferon alpha /beta re... 30 7.4
X77722-1|CAA54785.1| 331|Homo sapiens interferon alpha/beta rec... 30 7.4
U29584-1|AAC50202.1| 515|Homo sapiens interferon alpha-beta rec... 30 7.4
L42243-3|AAB46417.1| 331|Homo sapiens interferon receptor protein. 30 7.4
L42243-2|AAB46418.1| 239|Homo sapiens interferon receptor protein. 30 7.4
L42243-1|AAB46419.1| 515|Homo sapiens interferon receptor protein. 30 7.4
L41944-1|AAB46415.1| 331|Homo sapiens interferon receptor protein. 30 7.4
L41943-1|AAB46414.1| 239|Homo sapiens interferon receptor protein. 30 7.4
L41942-1|AAB46413.1| 515|Homo sapiens interferon receptor protein. 30 7.4
CR541817-1|CAG46616.1| 331|Homo sapiens IFNAR2 protein. 30 7.4
BC002793-1|AAH02793.1| 331|Homo sapiens interferon (alpha, beta... 30 7.4
AY740397-1|AAU21038.1| 331|Homo sapiens interferon (alpha, beta... 30 7.4
AB065885-1|BAC06102.1| 307|Homo sapiens seven transmembrane hel... 30 9.8
>BC042912-1|AAH42912.1| 518|Homo sapiens seryl-tRNA synthetase 2,
mitochondrial protein.
Length = 518
Score = 48.4 bits (110), Expect = 3e-05
Identities = 47/217 (21%), Positives = 82/217 (37%), Gaps = 7/217 (3%)
Frame = -1
Query: 717 EGCGIN-HTNPDTVFILHHNEDTQINSDSRLHLTGGGSLCSYMAYHAKNVLYPKVLPLKY 541
EGCG+ + NP ++ N D D L T L Y H V +
Sbjct: 270 EGCGMTPNANPSQIY----NIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCS 325
Query: 540 FNMGRQYVPVASDFNSLLTVSQAAVVEFFAVTKAATD-IDEMLDNLIEILKQYYSRFDYH 364
R + L V VE F VT + ++L+ + + + + H
Sbjct: 326 STCYRAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLH 385
Query: 363 FRISMTAAHQLNMWESLRLSVEMYSSSQQKYATIANVSLSGDFISKRLMFTY-VDNKVTK 187
FR+ +L + + +E + + ++ + + S DF S+RL + + +
Sbjct: 386 FRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGELQ 445
Query: 186 FPHILSGTLLNVPKFLACVLE----QDNDFCVPDILK 88
F H ++ T VP+ L +LE +D VP L+
Sbjct: 446 FAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQ 482
>AK000457-1|BAA91176.1| 518|Homo sapiens protein ( Homo sapiens
cDNA FLJ20450 fis, clone KAT05607. ).
Length = 518
Score = 48.4 bits (110), Expect = 3e-05
Identities = 47/217 (21%), Positives = 82/217 (37%), Gaps = 7/217 (3%)
Frame = -1
Query: 717 EGCGIN-HTNPDTVFILHHNEDTQINSDSRLHLTGGGSLCSYMAYHAKNVLYPKVLPLKY 541
EGCG+ + NP ++ N D D L T L Y H V +
Sbjct: 270 EGCGMTPNANPSQIY----NIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCS 325
Query: 540 FNMGRQYVPVASDFNSLLTVSQAAVVEFFAVTKAATD-IDEMLDNLIEILKQYYSRFDYH 364
R + L V VE F VT + ++L+ + + + + H
Sbjct: 326 STCYRAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLH 385
Query: 363 FRISMTAAHQLNMWESLRLSVEMYSSSQQKYATIANVSLSGDFISKRLMFTY-VDNKVTK 187
FR+ +L + + +E + + ++ + + S DF S+RL + + +
Sbjct: 386 FRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGELQ 445
Query: 186 FPHILSGTLLNVPKFLACVLE----QDNDFCVPDILK 88
F H ++ T VP+ L +LE +D VP L+
Sbjct: 446 FAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQ 482
>AB029948-1|BAA99557.1| 518|Homo sapiens mitochondrial seryl-tRNA
synthetase protein.
Length = 518
Score = 48.4 bits (110), Expect = 3e-05
Identities = 47/217 (21%), Positives = 82/217 (37%), Gaps = 7/217 (3%)
Frame = -1
Query: 717 EGCGIN-HTNPDTVFILHHNEDTQINSDSRLHLTGGGSLCSYMAYHAKNVLYPKVLPLKY 541
EGCG+ + NP ++ N D D L T L Y H V +
Sbjct: 270 EGCGMTPNANPSQIY----NIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCS 325
Query: 540 FNMGRQYVPVASDFNSLLTVSQAAVVEFFAVTKAATD-IDEMLDNLIEILKQYYSRFDYH 364
R + L V VE F VT + ++L+ + + + + H
Sbjct: 326 STCYRAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLH 385
Query: 363 FRISMTAAHQLNMWESLRLSVEMYSSSQQKYATIANVSLSGDFISKRLMFTY-VDNKVTK 187
FR+ +L + + +E + + ++ + + S DF S+RL + + +
Sbjct: 386 FRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGELQ 445
Query: 186 FPHILSGTLLNVPKFLACVLE----QDNDFCVPDILK 88
F H ++ T VP+ L +LE +D VP L+
Sbjct: 446 FAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQ 482
>AF264627-1|AAG03019.1| 84|Homo sapiens uncharacterized gastric
protein YC12P protein.
Length = 84
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/71 (25%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = -1
Query: 285 SQQKYATIANVSLSGDFISKRLMFTYVDNKVTKFPHILSGTLLNVPKFLACVLEQ---DN 115
S+ +Y ++++S+ GDF ++R+ Y ++ T + + ++G+ L + + +A +LEQ ++
Sbjct: 3 SENRYREVSSISICGDFQAQRMKLRYKEDGKTLYANTINGSGLAIDRIIAIILEQYQTES 62
Query: 114 DFC-VPDILKP 85
+ +P++L P
Sbjct: 63 GYIEIPEVLIP 73
>BC112201-1|AAI12202.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa protein.
Length = 1849
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -1
Query: 723 HCEGCGINHTNPDTVFILHH--NEDTQINSDSRLHLTGGGSLCSYMAYHAKNVLYPKVLP 550
H G G+N T DTV + H N + + R H G + + + L K++
Sbjct: 1707 HVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMG 1766
Query: 549 LKYFNMGRQYVPVASDFNSLLTVSQAAVVEFFAVTK 442
L+ F M ++ + +SL ++ +++ F + K
Sbjct: 1767 LQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDK 1802
>BC029930-1|AAH29930.1| 680|Homo sapiens BTAF1 protein protein.
Length = 680
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -1
Query: 723 HCEGCGINHTNPDTVFILHH--NEDTQINSDSRLHLTGGGSLCSYMAYHAKNVLYPKVLP 550
H G G+N T DTV + H N + + R H G + + + L K++
Sbjct: 538 HVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMG 597
Query: 549 LKYFNMGRQYVPVASDFNSLLTVSQAAVVEFFAVTK 442
L+ F M ++ + +SL ++ +++ F + K
Sbjct: 598 LQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDK 633
>BC001020-1|AAH01020.2| 142|Homo sapiens SARS2 protein protein.
Length = 142
Score = 36.3 bits (80), Expect = 0.11
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = -1
Query: 366 HFRISMTAAHQLNMWESLRLSVEMYSSSQQKYATIANVSLSGDFISKRLMFTY-VDNKVT 190
HFR+ +L + + +E + + ++ + + S DF S+RL + +
Sbjct: 9 HFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGEL 68
Query: 189 KFPHILSGTLLNVPKFLACVLE----QDNDFCVPDILK 88
+F H ++ T VP+ L +LE +D VP L+
Sbjct: 69 QFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQ 106
>AL365398-1|CAI14103.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa (Mot1
protein.
Length = 1849
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -1
Query: 723 HCEGCGINHTNPDTVFILHH--NEDTQINSDSRLHLTGGGSLCSYMAYHAKNVLYPKVLP 550
H G G+N T DTV + H N + + R H G + + + L K++
Sbjct: 1707 HVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMG 1766
Query: 549 LKYFNMGRQYVPVASDFNSLLTVSQAAVVEFFAVTK 442
L+ F M ++ + +SL ++ +++ F + K
Sbjct: 1767 LQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDK 1802
>AL359198-2|CAH73478.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa (Mot1
protein.
Length = 1849
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -1
Query: 723 HCEGCGINHTNPDTVFILHH--NEDTQINSDSRLHLTGGGSLCSYMAYHAKNVLYPKVLP 550
H G G+N T DTV + H N + + R H G + + + L K++
Sbjct: 1707 HVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMG 1766
Query: 549 LKYFNMGRQYVPVASDFNSLLTVSQAAVVEFFAVTK 442
L+ F M ++ + +SL ++ +++ F + K
Sbjct: 1767 LQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDK 1802
>AJ001017-1|CAA04475.1| 1849|Homo sapiens TBP associated factor
protein.
Length = 1849
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -1
Query: 723 HCEGCGINHTNPDTVFILHH--NEDTQINSDSRLHLTGGGSLCSYMAYHAKNVLYPKVLP 550
H G G+N T DTV + H N + + R H G + + + L K++
Sbjct: 1707 HVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMG 1766
Query: 549 LKYFNMGRQYVPVASDFNSLLTVSQAAVVEFFAVTK 442
L+ F M ++ + +SL ++ +++ F + K
Sbjct: 1767 LQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDK 1802
>AF038362-1|AAC04573.1| 1849|Homo sapiens TBP-associated factor 172
protein.
Length = 1849
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -1
Query: 723 HCEGCGINHTNPDTVFILHH--NEDTQINSDSRLHLTGGGSLCSYMAYHAKNVLYPKVLP 550
H G G+N T DTV + H N + + R H G + + + L K++
Sbjct: 1707 HVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMG 1766
Query: 549 LKYFNMGRQYVPVASDFNSLLTVSQAAVVEFFAVTK 442
L+ F M ++ + +SL ++ +++ F + K
Sbjct: 1767 LQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDK 1802
>AB208843-1|BAD92080.1| 699|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa varian
protein.
Length = 699
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = -1
Query: 723 HCEGCGINHTNPDTVFILHH--NEDTQINSDSRLHLTGGGSLCSYMAYHAKNVLYPKVLP 550
H G G+N T DTV + H N + + R H G + + + L K++
Sbjct: 557 HVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMG 616
Query: 549 LKYFNMGRQYVPVASDFNSLLTVSQAAVVEFFAVTK 442
L+ F M ++ + +SL ++ +++ F + K
Sbjct: 617 LQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDK 652
>AB125267-1|BAD17859.1| 913|Homo sapiens integral membrane protein
GDD1 protein.
Length = 913
Score = 31.5 bits (68), Expect = 3.2
Identities = 21/103 (20%), Positives = 46/103 (44%)
Frame = -1
Query: 516 PVASDFNSLLTVSQAAVVEFFAVTKAATDIDEMLDNLIEILKQYYSRFDYHFRISMTAAH 337
P+ + L TV+Q V F + + +++N++EI + + R + AH
Sbjct: 666 PLGLFYEYLETVTQFGFVTLFVASFPLAPLLALINNIVEIRVDAWKLTTQYRRTVASKAH 725
Query: 336 QLNMWESLRLSVEMYSSSQQKYATIANVSLSGDFISKRLMFTY 208
+ +W+ + + + S + + V+ + D I RL++ Y
Sbjct: 726 SIGVWQDILYGMAVLSVATNAFI----VAFTSDII-PRLVYYY 763
>AF245044-1|AAG44481.1| 108|Homo sapiens HT023 protein.
Length = 108
Score = 30.7 bits (66), Expect = 5.6
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 43 ITFCLSYILQTPIFRFQYIWNTKVIILL*NTSQKFWYIQQCT--*QNMWKFCNFIIHI 210
I+ CLS+ + F IW T II+L + W+I C +N+ KF N +++
Sbjct: 47 ISLCLSWAVLENTLVFT-IWFTNTIIILPGLKCRIWHIDACNGKKKNLLKFVNVQLNL 103
>X89814-1|CAA61940.1| 239|Homo sapiens soluble IFN alpha/beta
receptor protein.
Length = 239
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>X89772-1|CAA61914.1| 515|Homo sapiens interferon alpha /beta
receptor protein.
Length = 515
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>X77722-1|CAA54785.1| 331|Homo sapiens interferon alpha/beta
receptor protein.
Length = 331
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>U29584-1|AAC50202.1| 515|Homo sapiens interferon alpha-beta
receptor, beta subunit long form protein.
Length = 515
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>L42243-3|AAB46417.1| 331|Homo sapiens interferon receptor protein.
Length = 331
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>L42243-2|AAB46418.1| 239|Homo sapiens interferon receptor protein.
Length = 239
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>L42243-1|AAB46419.1| 515|Homo sapiens interferon receptor protein.
Length = 515
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>L41944-1|AAB46415.1| 331|Homo sapiens interferon receptor protein.
Length = 331
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>L41943-1|AAB46414.1| 239|Homo sapiens interferon receptor protein.
Length = 239
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>L41942-1|AAB46413.1| 515|Homo sapiens interferon receptor protein.
Length = 515
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>CR541817-1|CAG46616.1| 331|Homo sapiens IFNAR2 protein.
Length = 331
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>BC002793-1|AAH02793.1| 331|Homo sapiens interferon (alpha, beta
and omega) receptor 2 protein.
Length = 331
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>AY740397-1|AAU21038.1| 331|Homo sapiens interferon (alpha, beta
and omega) receptor 2 protein.
Length = 331
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 36 SFYYILFKLYFTNSNFQVSIYLEHKSHYLALK 131
+F YI+ KL N+N+ VS+YLEH +K
Sbjct: 192 NFTYIIDKL-IPNTNYCVSVYLEHSDEQAVIK 222
>AB065885-1|BAC06102.1| 307|Homo sapiens seven transmembrane helix
receptor protein.
Length = 307
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 274 FLLGAGIHFHRQPQR-FPHVKLMSSCHTYPKMIIKPTVILLQN 399
F+ G GI + +P R FP K++S HT ++ P + L+N
Sbjct: 249 FMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRN 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,584,081
Number of Sequences: 237096
Number of extensions: 2244760
Number of successful extensions: 5393
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5393
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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