Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k22f
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   0.84 
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    23   1.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.9  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   4.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   5.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 491 NLLVTPKRYSALFINGAKATENYVYVTPYLDFP 589
           N+++       +FIN      N  ++TP+ DFP
Sbjct: 2   NMILKLSLKDIVFINPLVKYLNIFFITPWYDFP 34


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +1

Query: 169 GAAQHYCLHCARYFIDEQALNDHFKTKVHKR 261
           G   + C HC R F+    L  H +    +R
Sbjct: 34  GERPYRCEHCDRQFVQVANLRRHLRVHTGER 64


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +1

Query: 169 GAAQHYCLHCARYFIDEQALNDHFKTKVHKR 261
           G   + C HC R F+    L  H +    +R
Sbjct: 187 GERPYRCEHCDRQFVQVANLRRHLRVHTGER 217


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +1

Query: 376 KSQTDEDGDAILEES 420
           K++TD+D DA++ +S
Sbjct: 153 KNKTDDDDDALVSDS 167


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 187 CLHCARYFIDEQALNDHFKTKVHKRRLK 270
           C+ C R    + AL  H++T   +R  K
Sbjct: 137 CVICHRVLSCKSALQMHYRTHTGERPFK 164


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 462 VLYIIVINFLLFVW 421
           +LYI+   FL +VW
Sbjct: 144 ILYILATVFLAYVW 157


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 462 VLYIIVINFLLFVW 421
           +LYI+   FL +VW
Sbjct: 144 ILYILATVFLAYVW 157


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 459 LYIIVINFLLFVWTFL*NSITIFICLRFLN 370
           +Y+IV   ++  W  +  S  IF+C    N
Sbjct: 255 IYMIVYIIVVIFWYTVNASTNIFLCDEICN 284


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 459 LYIIVINFLLFVWTFL*NSITIFICLRFLN 370
           +Y+IV   ++  W  +  S  IF+C    N
Sbjct: 255 IYMIVYIIVVIFWYTVNASTNIFLCDEICN 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,972
Number of Sequences: 336
Number of extensions: 2548
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)