Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k22f
(592 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43332| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 7e-21
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 32 0.30
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 32 0.30
SB_25397| Best HMM Match : zf-C2H2 (HMM E-Value=0.38) 32 0.40
SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63) 31 0.53
SB_7923| Best HMM Match : Remorin_C (HMM E-Value=1.4) 31 0.70
SB_37894| Best HMM Match : DUF16 (HMM E-Value=9.4) 31 0.93
SB_42825| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.2
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 30 1.6
SB_47920| Best HMM Match : Kelch_1 (HMM E-Value=1.9e-34) 29 2.1
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_13977| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_34342| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_13703| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 29 2.8
SB_54130| Best HMM Match : DUF883 (HMM E-Value=2.6) 28 5.0
SB_28626| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_28990| Best HMM Match : YABBY (HMM E-Value=0.45) 28 5.0
SB_51373| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_11801| Best HMM Match : DEAD (HMM E-Value=5e-05) 28 6.6
SB_8765| Best HMM Match : WD40 (HMM E-Value=3.9e-15) 28 6.6
SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1) 28 6.6
SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 28 6.6
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 27 8.7
SB_22837| Best HMM Match : REJ (HMM E-Value=0.057) 27 8.7
SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9) 27 8.7
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 27 8.7
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_43332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 97.5 bits (232), Expect = 7e-21
Identities = 56/125 (44%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Frame = +1
Query: 19 KRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHC 198
++K+ H D HLKK++R R R KDLD+I +DLK A KLL+Q+VD DLPG Q YCL C
Sbjct: 5 RKKRMHSNDKHLKKKYRTRKRTKDLDQIHEDLKPVKAAKLLSQEVDTDLPGCGQFYCLQC 64
Query: 199 ARYFIDEQALNDHFKTKVHKRRLKALELEPYTIEESERAAGHGSFK-TATKRKIVSQNIE 375
A L+ L+ PYTIEESE AAG GS+ T+TK ++V Q+
Sbjct: 65 A---------------------LRMLKEVPYTIEESEAAAGMGSYPFTSTKPELVDQHKA 103
Query: 376 KSQTD 390
+ + D
Sbjct: 104 EMEID 108
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +1
Query: 19 KRKKYHCGDTHLKKRWR-VRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLH 195
K+++ + ++ W + + ++DLDE+D L E D Q YC+
Sbjct: 244 KKEREKMFQEYQEQEWASLADLERDLDEMDNHLDSEFGRVDDVTGSQSDEEDVEQFYCVA 303
Query: 196 CARYFIDEQALNDHFKTKVHKRRLKALELE 285
C + F +AL +H K++ HK + ++ E
Sbjct: 304 CDKSFKSTKALANHEKSRKHKENVALIKEE 333
>SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 139 LNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKTKVHKR 261
+N+ +DL +CL+C + F D Q L DH + K HK+
Sbjct: 200 INEFLDLLEEKLESLHCLYCEKVFKDRQILKDHMRKKQHKK 240
>SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +1
Query: 181 HYCLHCARYFIDEQALNDHFKTKVHKRRLKALELEPYTIEESERAAGHGSFKTATKRKIV 360
H C C R F + L H + H+RR K E+ EE ER A + + K
Sbjct: 336 HKCDTCGRTFNQKVCLRLHLPCREHERRQKREEVRKRREEEQERKALRAAERKMRKSTDS 395
Query: 361 SQNIEKSQTDEDGD 402
+ +K++ D
Sbjct: 396 GKTNKKAKRSHSSD 409
>SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 76 NRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFK-TKV 252
N+ ++ +Q L ++ K +K + + ++ CLHCAR F + LN H K KV
Sbjct: 520 NQSFQCEKCEQSLNRKDTFKRHMKKYNQE----KEYKCLHCAREFYRKDNLNQHLKLCKV 575
Query: 253 HKRR 264
K+R
Sbjct: 576 LKKR 579
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 32.3 bits (70), Expect = 0.30
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Frame = +1
Query: 67 RVRNRKKDLDEIDQDLKEENAEKLLNQKVDL-----DLPGAAQHYCLHCARYFIDEQALN 231
++ K + E K+EN +KL ++ +L DL + Y +CA ++A++
Sbjct: 784 KLSKEKLETLESSNKKKDENFDKLAAERQELSVIVDDLSKQLESYISNCAELEEAKRAMD 843
Query: 232 DHFKTKVHKRRLKALELEPYTIEESER-----AAGHGSFKTATKRKIVSQNIEKSQT 387
+ KV K ELE +EES R G +TA K + Q++ SQ+
Sbjct: 844 NRLTEKVESLTEKIKELE-NDLEESRRRCLELEGGQVDSETAIKIAQLEQDLSDSQS 899
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 32.3 bits (70), Expect = 0.30
Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Frame = +1
Query: 46 THLKKRWRVRNRKKDLDEIDQDLKEENAE-KLLNQKVDLDLPGAAQHYCLHCARYFIDEQ 222
T ++K+ R+ +K +E+ DL+E A+ + + ++ D + Q+Y + ID
Sbjct: 1103 TEMEKQ-RLCEVEKVRNEMLSDLEETRAKLQRIVKECDERISILTQNYEAQILQLTIDRD 1161
Query: 223 ALNDHFKTKVHKRRLKALELEPYTIEESERAAGHGSFKTATKRKIVSQNIEKSQTDEDGD 402
+ + + +L + E E ++ E+ + + K+ + E ++ DE+ D
Sbjct: 1162 NIEAKLEAMTRREQLASEEFEKNILDVKEQYEAQLARVKKERNKLKQKYEELTEEDEEED 1221
Query: 403 AILEES 420
AI EE+
Sbjct: 1222 AIYEET 1227
>SB_25397| Best HMM Match : zf-C2H2 (HMM E-Value=0.38)
Length = 283
Score = 31.9 bits (69), Expect = 0.40
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 160 DLPGAAQHYCLHCARYFIDEQALNDHFKTKVHKR 261
D P +++C HC + F+ ++ L H T+V KR
Sbjct: 236 DDPQGKRNFCDHCGKEFLLKEVLRTHINTEVAKR 269
>SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63)
Length = 592
Score = 31.5 bits (68), Expect = 0.53
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 1/117 (0%)
Frame = +1
Query: 76 NRKKDL-DEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKTKV 252
N+ K L D + + K E EKLLN+ + DL +H A DE+ D K +
Sbjct: 360 NKGKGLEDSSESEKKPEAPEKLLNELLS-DLAIEQEHVNELVAE---DEEKSRDDVKKEH 415
Query: 253 HKRRLKALELEPYTIEESERAAGHGSFKTATKRKIVSQNIEKSQTDEDGDAILEESP 423
K +E +++ + +I+ + E Q +E GD E+P
Sbjct: 416 DKEGFVVVEATDAVGWDTDNSIESRKTDNTESAQIMESSTETDQGEEQGDTSFRETP 472
>SB_7923| Best HMM Match : Remorin_C (HMM E-Value=1.4)
Length = 201
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +1
Query: 13 TYKRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYC 189
T +K +HC + LKK V KK LD+ E EKL+ +K +LD A H+C
Sbjct: 143 TLWKKLHHCNE-ELKKYSHVN--KKALDQFINF--SEQKEKLMKRKDELDKGYEASHHC 196
>SB_37894| Best HMM Match : DUF16 (HMM E-Value=9.4)
Length = 244
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 497 LVTPKRYSALFINGAKATENYVYVTPYLDFP 589
L P + A G++A E YVYV LDFP
Sbjct: 161 LTVPGLFKATLKYGSRAAEQYVYVIKDLDFP 191
>SB_42825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 30.7 bits (66), Expect = 0.93
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 178 QHYCLHCARYFIDEQALNDHFK 243
++ CLHCAR F + LN+H K
Sbjct: 252 EYKCLHCAREFYRKDNLNEHLK 273
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 163 LPGAAQHYCLHCARYFIDEQALNDHFKTKVHKR 261
LP +H C+ C + F AL HF+T +R
Sbjct: 181 LPRERKHECMECQKLFDSPNALEVHFRTHTGER 213
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 139 LNQKVDLDLPGAAQHYCLHCARYFIDEQALNDHFKTKVHKRRLKALELEPY 291
L Q + P A ++YC HC + F + AL H K V + K E + Y
Sbjct: 992 LQQNPAKEDPRANENYCDHCDKTFEETDALRLHVKKAVWVLKGKLKERKAY 1042
>SB_47920| Best HMM Match : Kelch_1 (HMM E-Value=1.9e-34)
Length = 405
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 46 THLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCL 192
T +K R + + ++D ++ D D+ +E A L ++K L +PG Q L
Sbjct: 127 TKIKNRRQEGSDQEDSEDDDSDIDDELAGYLYDKKPSLPIPGYGQSMVL 175
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +1
Query: 76 NRKKDLDEIDQDLKE---ENAEKLLNQKVDL----DLPGAAQHYCLHCARYFIDEQALND 234
NR + L + +++ N +K K DL A +H C C + + D ++L D
Sbjct: 228 NRNRHLRTVHSNIRPYTCNNCQKTFKTKCDLKQHISRHNAGKHQCNVCKKSYADLKSLED 287
Query: 235 HFKTKVHKR 261
H ++ V ++
Sbjct: 288 HLRSHVGEK 296
>SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 19 KRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEK 135
KRK Y+C T KR R +++++E +++ +EE E+
Sbjct: 111 KRKLYYCNLTITIKRRRREEEEEEVEEEEEEEEEEEEEE 149
>SB_13977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 763
Score = 29.1 bits (62), Expect = 2.8
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Frame = +1
Query: 55 KKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALND 234
K +W + D DE+ + + EKLL + + G C+ Y+ + +
Sbjct: 226 KAKWPPQPEVTDNDEVASETVKSRKEKLLVATEEPEEKGQVDALLEQCSSYWKLRRVV-A 284
Query: 235 HFKTKVHKRRLKALELEPYTIEESERAAGHGSFKT-ATKRKIVSQNIEKSQTDEDGDA 405
+ + H R K+ P T EE +A + A KR+ V ++E Q EDG A
Sbjct: 285 YIQRFGHNCRSKSKCTGPLTTEEINKAESTLIRRAQAAKREKVEASME-VQIGEDGIA 341
>SB_34342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +1
Query: 298 EESERAAGHGSFKTAT-----KRKIVSQNIEKSQTDEDGDAILEESP 423
+ SER AGH + + T + + S ++ + D+DGD + E P
Sbjct: 460 DRSERQAGHSQWGSTTSLNISRGSVSSYDVAHGEDDDDGDGLHRERP 506
>SB_13703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1358
Score = 29.1 bits (62), Expect = 2.8
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Frame = +1
Query: 55 KKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALND 234
K +W + D DE+ + + EKLL + + G A C+ Y+ + +
Sbjct: 821 KAKWPPQPEVTDNDEVASETVKSRKEKLLVATEEPEEKGQADALLEQCSSYWKLRRVV-A 879
Query: 235 HFKTKVHKRRLKALELEPYTIEESERAAGHGSFKT-ATKRKIVSQNIEKSQTDEDGDA 405
+ + H R K+ P T EE +A + KR+ V ++E Q +DG A
Sbjct: 880 YIQRFGHNCRSKSKRTGPLTTEEINKAESTLIRRAQVAKREKVEASME-VQIGKDGIA 936
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 29.1 bits (62), Expect = 2.8
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Frame = +1
Query: 55 KKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVDLDLPGAAQHYCLHCARYFIDEQALND 234
K +W + D DE+ + + EKLL + + G C+ Y+ + +
Sbjct: 982 KAKWPPQPEVTDNDEVASETVKSRKEKLLVATEEPEEKGQVDALLEQCSSYWKLRRVV-A 1040
Query: 235 HFKTKVHKRRLKALELEPYTIEESERAAGHGSFKT-ATKRKIVSQNIEKSQTDEDGDA 405
+ + H R K+ P T EE +A + KR+ V ++E Q EDG A
Sbjct: 1041 YIQRFGHNCRSKSKRTGPLTTEEINKAESTLIRRAQVAKREKVEASME-VQIGEDGIA 1097
>SB_54130| Best HMM Match : DUF883 (HMM E-Value=2.6)
Length = 172
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 181 HYCLHCARYFIDEQALNDHFK--TKVHKRRLKALELEPYTIEESERA 315
HY LH RY +QA +H K K H+ +K +E +P + E+S +A
Sbjct: 118 HYLLHGLRY--SDQAKEEHAKLIPKYHEIMIKTIEQDP-SSEKSYQA 161
>SB_28626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 508 QKIFSSFHQWCQGNRKLCLCHSL 576
+K+FSSF QW + K+ C+SL
Sbjct: 771 KKVFSSFLQWGRNKTKILECNSL 793
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 181 HYCLHCARYFIDEQALNDHFK--TKVHKRRLKALELEPYTIEESERA 315
HY LH RY +QA +H K K H+ +K +E +P + E+S +A
Sbjct: 734 HYLLHGLRY--SDQAKEEHAKLIPKYHEIMIKTIEQDP-SSEKSYQA 777
>SB_28990| Best HMM Match : YABBY (HMM E-Value=0.45)
Length = 853
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 139 VIFQHFLPLNLGLFHPNLSFCYALSTAFLNVC 44
+I F+P ++ + + F YALST FLN+C
Sbjct: 13 LILAVFVPSHIAVIAISSFFGYALSTDFLNLC 44
>SB_51373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 13 TYKRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLKEENAEKLLNQKVD 156
T+K +++ D H+ R R + +D + D D+ N ++ N +VD
Sbjct: 7 THKDDEWNDSDRHISPRVRHKKTHEDDEWSDLDINTSNRKRHKNTRVD 54
>SB_11801| Best HMM Match : DEAD (HMM E-Value=5e-05)
Length = 1442
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 187 CLHCARYFIDEQALNDHFKTKVHKRRLKALELEPYTIEESERAAGHGSFKTATKRKIVS- 363
C C ++ +++HF++ HK R+ + +PY ++ E H + K+ + S
Sbjct: 824 CSLCKISLTSKELVDEHFQSTKHKNRIAKVTADPY-LKFCEYCKVHLNSKSQAQEHFAST 882
Query: 364 ---QNIEKSQ 384
Q + KSQ
Sbjct: 883 RHAQTMAKSQ 892
>SB_8765| Best HMM Match : WD40 (HMM E-Value=3.9e-15)
Length = 481
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 463 SFLHTVQNTKP--IGNPQKIFSSFHQWCQGNRKLCLCHSLFRLSR 591
SF + +N + + P KIF S + C GNR+L H+LF LS+
Sbjct: 380 SFKNKKENIRSSQLKTPNKIFWSRIR-CFGNRRLICSHALFFLSQ 423
>SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1)
Length = 1188
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 16 YKRKKYHCGDTHLKKRWRVRNRKKDLDEIDQDLK 117
YK K++HCG K VR+ +K+ D+I +L+
Sbjct: 661 YKEKRFHCGQVDEK----VRSLQKERDQIFSELE 690
>SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1328
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 KRRLKALELEPYTIEESER-AAGHGSFKTATKRKIVSQNIEKSQTDEDGD 402
+R L A++ +P + ++ A G+ KT + S+ EKS TD+D D
Sbjct: 574 RRYLDAIKEKPVSANSTQTDTAQDGTTKTEIEETSNSEPTEKSHTDKDDD 623
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 408 NSITIFICLRFLNIL*NNFSFCCCF 334
NS++I +C+R L NN CCF
Sbjct: 651 NSVSITVCVRHLRENVNNSKIRCCF 675
>SB_22837| Best HMM Match : REJ (HMM E-Value=0.057)
Length = 643
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 523 SFHQWCQGNRKLCLCHSLF 579
SFH +C + KLC+C S +
Sbjct: 506 SFHGYCDRSTKLCVCESFW 524
>SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9)
Length = 343
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 13 TYKRKKYHCGDTHLKKRWRVR 75
++ K+ HC TH K WR R
Sbjct: 283 SHNYKRIHCTTTHYKNSWRAR 303
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 181 HYCLHCARYFIDEQALNDHFKTKV 252
+YC HC R F + L H KT V
Sbjct: 298 NYCDHCNRTFYIRELLRQHIKTVV 321
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 181 HYCLHCARYFIDEQALNDHFKTKVHKRRLK 270
H C C+R F D +L H T H++RLK
Sbjct: 290 HQCTFCSRSFHDYSSLAKH--TTWHRKRLK 317
>SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 413 RKVQTKRRKLMTMIYKTHFYTLFKTRNLLVTP 508
++ + +R KLM+++Y THF L ++L++ P
Sbjct: 103 KEYKDRRHKLMSLLYNTHFGEL-HDKHLVIIP 133
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,270,870
Number of Sequences: 59808
Number of extensions: 286295
Number of successful extensions: 1022
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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