Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k21r
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    23   3.5  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    23   3.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   8.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.2  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 352 YLRVTSSATSEDINLDYF 299
           Y    + A  EDIN+DYF
Sbjct: 121 YSTTITRARFEDINMDYF 138


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 352 YLRVTSSATSEDINLDYF 299
           Y    + A  EDIN+DYF
Sbjct: 121 YSTTITRARFEDINMDYF 138


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 614 HLFPARFHISPDRCSLVAAAAPHLE 540
           HL  A   +SP+ C LV +   H+E
Sbjct: 83  HLAAANI-LSPEDCELVLSNPTHME 106


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 637 APKPYARWTRYRRRPSLCASSDSDNEHRXS 726
           AP+  +R T+     S  +S+D D+E R S
Sbjct: 122 APRTASRETKSSESDSGASSADPDDELRSS 151


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 614 HLFPARFHISPDRCSLVAAAAPHLE 540
           HL  A   +SP+ C LV +   H+E
Sbjct: 83  HLAAANI-LSPEDCELVLSNPTHME 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,780
Number of Sequences: 336
Number of extensions: 4020
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)