Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k21r
(766 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 1.0
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 7.2
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 7.2
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 21 9.5
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 21 9.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 9.5
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.5
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 9.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 9.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.5
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 21 9.5
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -2
Query: 660 PPCIGFRS--TLPLLYITFV---PCSFSHISRPVQPCCCGCSASRDVNLYIFT 517
PP +G++ + P +TF P + + I PV+PC C + D +++
Sbjct: 199 PPLVGWKDKRSHPAYNMTFAQNGPFNTTTIFVPVKPCPWICELTNDAGYVVYS 251
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VPV CG
Sbjct: 109 YYNINYIEQIPVPVPVPVYCG 129
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 108 YYNINYIEQVPVPIPVPIYCG 128
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 384 FFCDFYRHISFICA 343
FFCD +S +CA
Sbjct: 57 FFCDMSPSLSLLCA 70
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 386 CSLLSPKIKHMCNKLIKY 439
C+ + K KH NK++ Y
Sbjct: 72 CNKCNEKQKHTANKVVNY 89
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 107 YYNINYIEQIPVPVPVPIYCG 127
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 107 YYNINYIEQIPVPVPVPIYCG 127
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 113 YYNINYIEQIPVPVPVPIYCG 133
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 118 YYNINYIEQIPVPVPVPIYCG 138
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 431 LIYYTYVLFSVTGENISFAISIDISV 354
L T+ L S +GE ++ +ISI IS+
Sbjct: 261 LTVLTFYLPSDSGEKVTLSISILISL 286
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 431 LIYYTYVLFSVTGENISFAISIDISV 354
L T+ L S +GE ++ +ISI IS+
Sbjct: 261 LTVLTFYLPSDSGEKVTLSISILISL 286
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 345 YYNINYIEQIPVPVPVPIYCG 365
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 242 YFNIIYETVEPPGYSVPVSCG 180
Y+NI Y P VP+ CG
Sbjct: 352 YYNINYIEQIPVPVPVPIYCG 372
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 386 CSLLSPKIKHMCNKLIKY 439
C+ + K KH NK++ Y
Sbjct: 72 CNKCNEKQKHTANKVVNY 89
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,691
Number of Sequences: 438
Number of extensions: 4221
Number of successful extensions: 42
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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