Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k19r
(439 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 187 8e-47
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 177 1e-43
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 165 3e-40
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 137 1e-31
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 136 2e-31
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 126 3e-28
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 122 4e-27
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 117 1e-25
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 109 2e-23
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 106 2e-22
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 94 1e-18
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 82 4e-15
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 81 1e-14
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 79 4e-14
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 76 3e-13
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 73 2e-12
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 71 8e-12
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 64 2e-09
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 58 6e-08
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 55 6e-07
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 53 3e-06
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 52 7e-06
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 50 2e-05
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 50 2e-05
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 50 3e-05
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 48 9e-05
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 48 1e-04
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 47 2e-04
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 47 2e-04
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 45 8e-04
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 45 8e-04
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 44 0.001
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 43 0.003
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 42 0.004
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 40 0.031
UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2; Wolbach... 38 0.094
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 38 0.12
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 36 0.50
UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5; Bacteri... 35 0.66
UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10; ... 34 1.2
UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: Fli... 34 1.5
UniRef50_Q55GH4 Cluster: Glycogen synthase; n=19; Eukaryota|Rep:... 33 2.0
UniRef50_A3DNR2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1; Fusoba... 32 4.7
UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycopla... 32 4.7
UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispa... 32 6.2
UniRef50_Q5WKM9 Cluster: 3-dehydroquinate dehydratase; n=1; Baci... 32 6.2
UniRef50_A5ED35 Cluster: Flagellar basal body M-ring protein; n=... 32 6.2
UniRef50_Q4N6G9 Cluster: RNA-binding protein, putative; n=2; The... 32 6.2
UniRef50_A5E2G1 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7; Mollicu... 31 8.1
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 187 bits (456), Expect = 8e-47
Identities = 89/106 (83%), Positives = 94/106 (88%), Gaps = 1/106 (0%)
Frame = -2
Query: 315 KDIEKPQA-EVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRI 139
KDIEKP + + +HRIRITLTS NVRSLE VC D INGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 138 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPG
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPG 111
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 177 bits (430), Expect = 1e-43
Identities = 86/106 (81%), Positives = 92/106 (86%), Gaps = 1/106 (0%)
Frame = -2
Query: 315 KDIEKPQAEVS-PIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRI 139
KD K E IHRIRITLTS NV+SLEKVCAD I GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 138 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPG
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPG 109
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 165 bits (402), Expect = 3e-40
Identities = 77/102 (75%), Positives = 91/102 (89%)
Frame = -2
Query: 306 EKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRK 127
+K Q S +HRIRITLTS NVR+LEKVC+D +N AK ++LRVKGPVR+PTKIL+ITTRK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRK 67
Query: 126 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
TP GEGSKTW+ ++MRIHKR+IDLHSPSEIVKQITSI+IEPG
Sbjct: 68 TPNGEGSKTWETYEMRIHKRLIDLHSPSEIVKQITSIHIEPG 109
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 137 bits (331), Expect = 1e-31
Identities = 63/70 (90%), Positives = 67/70 (95%)
Frame = -2
Query: 210 INGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 31
I KKQKL+VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDL+SPSEIVK
Sbjct: 404 IQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIVK 463
Query: 30 QITSINIEPG 1
QITSI++EPG
Sbjct: 464 QITSISLEPG 473
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 136 bits (329), Expect = 2e-31
Identities = 66/111 (59%), Positives = 82/111 (73%)
Frame = -2
Query: 333 AAVVSGKDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPT 154
AA+++ K + PQ +S +R+TLT+ +++ LEKV I AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 153 KILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
K+LR+TTRKTPCGEGSKTWDRFQ+RIHKRVIDL S E Q+ I +EPG
Sbjct: 60 KVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDEATLQLKHIYLEPG 110
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 126 bits (303), Expect = 3e-28
Identities = 58/105 (55%), Positives = 77/105 (73%)
Frame = -2
Query: 315 KDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRIT 136
KDI+ P I IT+TS V+++E +CA+ KK+ ++VKGPVR+PTK LRIT
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRIT 64
Query: 135 TRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
TRKTPCGEGSKTWD +QMRI+KRV+ + + E VK+ITS+ +EPG
Sbjct: 65 TRKTPCGEGSKTWDHYQMRIYKRVLSMKTTPETVKEITSLKVEPG 109
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 122 bits (293), Expect = 4e-27
Identities = 59/106 (55%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = -2
Query: 315 KDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKK-QKLRVKGPVRMPTKILRI 139
K+ +K + EV + R+RITLT N++S+EK ++ ++ AKK +++ VKGPVRMPTK L I
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVI 63
Query: 138 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
T RK+PCGEGSKTWDRF+MRI+KR+IDL VK IT+ I+PG
Sbjct: 64 TVRKSPCGEGSKTWDRFEMRIYKRIIDLTCNVPDVKTITNFRIDPG 109
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 117 bits (281), Expect = 1e-25
Identities = 49/102 (48%), Positives = 76/102 (74%)
Frame = -2
Query: 306 EKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRK 127
+K QA + +R+T+TS N +++E V + + A+ +K+ + GPVR+PT+ L+ITTRK
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRK 64
Query: 126 TPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
TPCG G+ TWD F+++I+KR+IDLH+P+E VK+ITS +E G
Sbjct: 65 TPCGNGTNTWDTFELKIYKRIIDLHAPTEQVKKITSFTMESG 106
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 109 bits (263), Expect = 2e-23
Identities = 51/112 (45%), Positives = 75/112 (66%)
Frame = -2
Query: 339 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRM 160
MA VV D +K E P+ +IR+T+TS + +L++V + + KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 159 PTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEP 4
P + LRITTR+ PCG G++T+D F++RI+KRVID +E VKQ+T I +EP
Sbjct: 61 PRRRLRITTRRAPCGNGTETYDHFELRIYKRVIDFQGTAEAVKQVTQIALEP 112
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 106 bits (255), Expect = 2e-22
Identities = 44/90 (48%), Positives = 63/90 (70%)
Frame = -2
Query: 270 IRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 91
+RITLTS ++ SLEK C + I K+ ++GP+R+PTK + + RK+PCGEG+ TWD+
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDK 75
Query: 90 FQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
F+M+IHKR+ID HS IT IN++ G
Sbjct: 76 FEMKIHKRIIDFHSNKSEFNSITPINLDNG 105
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 93.9 bits (223), Expect = 1e-18
Identities = 51/108 (47%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Frame = -2
Query: 306 EKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAK----KQKLRV--KGPVRMPTKIL 145
EK + +IR+ +TS + + LE I + Q +V KGPVRMPTK L
Sbjct: 6 EKKVEDEQQTKKIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHL 65
Query: 144 RITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
++T RK+PCGEGSKTWDRF+MRIHKRVID K IT+ I PG
Sbjct: 66 KMTVRKSPCGEGSKTWDRFEMRIHKRVIDFQCTLPTFKDITNFKIGPG 113
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 82.2 bits (194), Expect = 4e-15
Identities = 32/86 (37%), Positives = 60/86 (69%)
Frame = -2
Query: 267 RITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 88
R+ LTS N+ L+ VC ++ K+ +R+KGP +P K L I TRK+PCG G++T++++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKW 65
Query: 87 QMRIHKRVIDLHSPSEIVKQITSINI 10
+MR+H+R+ID+ + + ++++ + I
Sbjct: 66 EMRMHRRIIDISADDKTIRRLIDLKI 91
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 80.6 bits (190), Expect = 1e-14
Identities = 34/88 (38%), Positives = 56/88 (63%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
+ RI L+ N R L+++C+ A K + + GPV +PT+ + + RK P GEGS+TWD
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Query: 93 RFQMRIHKRVIDLHSPSEIVKQITSINI 10
++MR+HKR+ID+ + ++QI I +
Sbjct: 67 HWEMRVHKRLIDISADERALRQIMRIQV 94
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 79.0 bits (186), Expect = 4e-14
Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = -2
Query: 315 KDIEK-PQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRI 139
KD K P + IHRIRITLTS NV+SLEKVCAD I GAK++ L+VKGPVRMPTK+ ++
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV-QL 62
Query: 138 TTRKTPCGEGSKTWD-RFQMRI 76
+ + C + W+ +FQ RI
Sbjct: 63 ESYISQC--AAVCWESKFQHRI 82
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 76.2 bits (179), Expect = 3e-13
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = -2
Query: 282 PIHRI-RITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGS 106
P+ RI RI + N S++ + D AKK ++V+GP+ +PT+ L +T R+ P G+G
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGY 77
Query: 105 KTWDRFQMRIHKRVIDLHSPSEIVKQITSINI 10
T+D ++MRIHKRV+D+ + ++Q+ + I
Sbjct: 78 HTYDHWEMRIHKRVVDMDADERALRQLMRLRI 109
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 73.3 bits (172), Expect = 2e-12
Identities = 34/91 (37%), Positives = 58/91 (63%)
Frame = -2
Query: 282 PIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 103
P + RI + S +V+S+E+V A++ + V+GPV +P K L I+T + P GEG+K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Query: 102 TWDRFQMRIHKRVIDLHSPSEIVKQITSINI 10
+D ++MRIHKR+ID+ ++++ I I +
Sbjct: 63 VFDHWEMRIHKRLIDVELNDKVMRNIMRIRV 93
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 71.3 bits (167), Expect = 8e-12
Identities = 29/88 (32%), Positives = 53/88 (60%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
+ RI L S N+ SL V N A+K ++V GP+ +PT + + + P GEG K W+
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWE 63
Query: 93 RFQMRIHKRVIDLHSPSEIVKQITSINI 10
++M++HKR+ID+ + +++Q+ + +
Sbjct: 64 HWEMKVHKRIIDIAADERVMRQLMRVRV 91
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/80 (33%), Positives = 48/80 (60%)
Frame = -2
Query: 270 IRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 91
+RI + S ++ L +V K+ ++++GP+ +PTKILR+ + G+K WD
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDT 63
Query: 90 FQMRIHKRVIDLHSPSEIVK 31
+QMRIH+R+ID+ + +K
Sbjct: 64 YQMRIHRRIIDIATDDRTIK 83
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 58.4 bits (135), Expect = 6e-08
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = -2
Query: 180 VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKR 67
+ GP R P + L ITTRK+PCGEG+ TW RF++R++KR
Sbjct: 53 ISGPCRAPVRRLTITTRKSPCGEGTNTWHRFELRMYKR 90
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 55.2 bits (127), Expect = 6e-07
Identities = 28/93 (30%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = -2
Query: 279 IHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKT 100
+ RIR+ L + + R L++ A + K+ ++GP+ MPTKI R T K+P +
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP-HINKDS 59
Query: 99 WDRFQMRIHKRVIDLHSPS-EIVKQITSINIEP 4
++F++RIH R++D+ + + + V +T +++ P
Sbjct: 60 REQFEIRIHARMLDIVAATPDTVDSLTKLDLAP 92
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 52.8 bits (121), Expect = 3e-06
Identities = 26/92 (28%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
+IRI L + + + L++ + + A++ +V GP+ +PT+I R T ++P + K+ +
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSRE 63
Query: 93 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPG 1
+F++R HKR++D+ P+ + V Q+ +++ G
Sbjct: 64 QFEVRTHKRMLDILEPTQQTVDQLMKLDLSAG 95
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 51.6 bits (118), Expect = 7e-06
Identities = 25/93 (26%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = -2
Query: 276 HRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 97
++I+I L S + RSL++ + ++ K+ + GP+ +P KI R T ++P K+
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP-HVHKKSR 61
Query: 96 DRFQMRIHKRVIDLHSPS-EIVKQITSINIEPG 1
++F++R HKR++ + P+ +V ++ +++ G
Sbjct: 62 EQFEIRKHKRLLVIDDPNPAVVDALSKVDLAAG 94
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 50.4 bits (115), Expect = 2e-05
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = -2
Query: 297 QAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPC 118
QA +IRI L S ++ C + AK + RV GPV +PTK ++P
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTKRRIFCVLRSP- 89
Query: 117 GEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPG 1
+ + F+ R H R+ID+H P ++ + + ++ + G
Sbjct: 90 HVNKDSREHFETRTHHRLIDVHQPTAQTIDALMALELPSG 129
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 50.0 bits (114), Expect = 2e-05
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
+IRI L + R L++ D + AK+ + GP+ +PT + T ++P K+ +
Sbjct: 14 KIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDRKSRE 72
Query: 93 RFQMRIHKRVIDLHSP-SEIVKQITSINIEPG 1
+F++R H+R+ID+ +P S+ + + ++ + G
Sbjct: 73 QFEIRTHRRLIDILNPTSKTIDALKTLTLPAG 104
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 49.6 bits (113), Expect = 3e-05
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
RIRI L + + R +++ D + AK+ +V GP+ +PTK R T +P D
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARD 63
Query: 93 RFQMRIHKRVIDLHSPSE 40
++++R HKR+ID+ P++
Sbjct: 64 QYEIRTHKRLIDIVDPTD 81
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 48.0 bits (109), Expect = 9e-05
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
+IRI L S + L + + + AK+ V GP+ +PT++ R T K+P + K+ +
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSPHVD-KKSRE 61
Query: 93 RFQMRIHKRVIDLHS-PSEIVKQITSINIEPG 1
+FQ+ +HK +++L S + ++ T+ + G
Sbjct: 62 QFQLAVHKCLLELSSFNAHLLSTFTNFQLPAG 93
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 47.6 bits (108), Expect = 1e-04
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = -2
Query: 336 AAAVVSGKDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMP 157
A+ V S I +++P +IRI L S V +E C ++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 156 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVID-LHSPSEIVKQITSINIEPG 1
TK K+P + F++R H+R+ID L+ ++ + + +++ G
Sbjct: 133 TKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAG 184
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/28 (71%), Positives = 26/28 (92%)
Frame = -2
Query: 87 QMRIHKRVIDLHSPSEIVKQITSINIEP 4
+M+IH ++IDL SPSEIVKQITS++IEP
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEP 60
Score = 31.5 bits (68), Expect = 8.1
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -2
Query: 315 KDIEKPQAEVSPIHRIRITLTSPNVRSLEKV 223
KD + IH+IRITL S NV+SLEK+
Sbjct: 4 KDRKNTHGAGGGIHQIRITLISCNVKSLEKM 34
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/78 (32%), Positives = 45/78 (57%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
RIRI L S + R +++ + + AK+ +V GP+ MPT+I R +P D
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARD 63
Query: 93 RFQMRIHKRVIDLHSPSE 40
++++R +KR+ID+ P++
Sbjct: 64 QYEIRTYKRLIDIVQPTD 81
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 44.8 bits (101), Expect = 8e-04
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
++ I + S + + KVC + K ++ +P K+ ITT + P G+G+K W
Sbjct: 20 KVCIDMASLEEKQINKVCREFYEYGKTFIDDLQRETVLPKKVESITTLRNPSGQGTKKWS 79
Query: 93 RFQMRIHKRVIDLHSPSEIVKQI 25
R++M +H R L + + ++++
Sbjct: 80 RYKMIVHLRNFYLEATHQQLEKV 102
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 44.8 bits (101), Expect = 8e-04
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
+IRI L + R L++ + AK+ + GP+ +PT+ T ++P + + +
Sbjct: 5 KIRIRLKAYEHRILDQSADKIVETAKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSRE 63
Query: 93 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPG 1
+F+MR HKR+ID+ +P+ + V + +++ G
Sbjct: 64 QFEMRTHKRLIDIVNPTPKTVDSLMKLDLPSG 95
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 44.0 bits (99), Expect = 0.001
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
++RI L+S + L C + + K+ VKGPV +PT+ ++P + +
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLRSP-HVNKDSRE 70
Query: 93 RFQMRIHKRVIDLHS-PSEIVKQITSINIEPG 1
F++R H R+ID+ S SE ++ + +++ G
Sbjct: 71 HFEIRSHFRIIDISSCSSETIEMLMRLDLPTG 102
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 42.7 bits (96), Expect = 0.003
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
+IRI L + + R L++ + AK+ V GP+ +PT+ I T + + +
Sbjct: 5 KIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTE-KSIYTVLRAVHKYKDSRE 63
Query: 93 RFQMRIHKRVIDLHSPS-EIVKQITSINIEPG 1
+F+MR HKR+ID+ +P+ + V + +++ G
Sbjct: 64 QFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSG 95
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 42.3 bits (95), Expect = 0.004
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
+IRI L + + R L+ C I A + GP+ +PTK ++P + +
Sbjct: 9 KIRIRLKAFDRRMLDLSCDKIIETADQTAATAIGPIPLPTKRKIYCVLRSPHVDKDSR-E 67
Query: 93 RFQMRIHKRVIDLHSPS 43
F+ R H+R+ID++SPS
Sbjct: 68 HFETRTHRRIIDIYSPS 84
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 39.5 bits (88), Expect = 0.031
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = -2
Query: 279 IHRIRITLTSPNVRSLEKVCADXI-NGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 103
I + + L S ++ L+ CA + N Q L++ GP+ +PTKI +IT ++P + K
Sbjct: 3 ITKCSLHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSPHID-KK 61
Query: 102 TWDRFQMRIHKRVIDLHS 49
+ ++F++R + + I + S
Sbjct: 62 SREQFEIRTYTKTIQIES 79
>UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2;
Wolbachia|Rep: 30S ribosomal protein S10 - Wolbachia
pipientis wMel
Length = 109
Score = 37.9 bits (84), Expect = 0.094
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = -2
Query: 270 IRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 91
I I + + + LE+ I+ K+ ++ GP+ +P K + ++P + K+ ++
Sbjct: 5 IYINIKAFDCSLLEECVRKFIDELKRSSAKLSGPIALPRKDSKFIVNRSPHVD-KKSREQ 63
Query: 90 FQMRIHKRVIDLHSPSEIVKQ-ITSINIEPG 1
F+MR +R+I LH + + Q +T ++ G
Sbjct: 64 FEMRTSRRLIVLHDLTPTMMQMLTGLSFSAG 94
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 37.5 bits (83), Expect = 0.12
Identities = 23/83 (27%), Positives = 45/83 (54%)
Frame = -2
Query: 276 HRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 97
+ ++I L S + R L++ I ++ +VKGP+ +PTK T ++P +
Sbjct: 3 NEMKIKLFSYDHRLLDQSVRKIIKSSQDSGAKVKGPIPLPTKKEIFTICRSP-HVNKTSR 61
Query: 96 DRFQMRIHKRVIDLHSPSEIVKQ 28
++F+ R H+R+I L + +E K+
Sbjct: 62 EQFERRTHQRLIILLNTTEKTKE 84
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 35.5 bits (78), Expect = 0.50
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
+IRI L S + ++K + K V GP+ +PT RI T K+ +
Sbjct: 4 KIRIKLKSYDHNLVDKSAEKIVRTVKATGAIVSGPIPLPTH-KRIFTVNRSTFVNKKSRE 62
Query: 93 RFQMRIHKRVIDLHS 49
+F++ +KR+ID++S
Sbjct: 63 QFELSSYKRLIDIYS 77
>UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5;
Bacteria|Rep: 30S ribosomal protein S10 - Onion yellows
phytoplasma
Length = 107
Score = 35.1 bits (77), Expect = 0.66
Identities = 20/90 (22%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = -2
Query: 270 IRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 91
I+I L + + +++ I+ K ++GP+ +PT+ T ++P + ++
Sbjct: 9 IKIILRAYDHHLIDQSAKKIIDILTKTGANIEGPIPLPTRKEVFTVLRSPF-VNKDSREQ 67
Query: 90 FQMRIHKRVIDLHSPS-EIVKQITSINIEP 4
F+ R HKR+I + +P+ + ++ + I++ P
Sbjct: 68 FERRTHKRLIQIINPNKKTIESLMHISLPP 97
>UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10;
n=3; Bacillariophyta|Rep: Chloroplast 30S ribosomal
protein S10 - Phaeodactylum tricornutum
Length = 107
Score = 34.3 bits (75), Expect = 1.2
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = -2
Query: 273 RIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 94
+IR+ L S N L C +N + G + +PT+ ++P + +
Sbjct: 8 KIRVRLESFNHELLNSSCQKIVNILQNTLSNSIGVITLPTRKRIYCVLRSPHVDKDSR-E 66
Query: 93 RFQMRIHKRVIDLHSPSE--IVKQITSINIEPG 1
F++R HKR+++++ SE I ++ ++ PG
Sbjct: 67 HFEIRTHKRILEIYYNSEVPIFDLLSEADLPPG 99
>UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: FliF
protein - Bradyrhizobium japonicum
Length = 519
Score = 33.9 bits (74), Expect = 1.5
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = -2
Query: 306 EKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRK 127
E P+ S + R+R L + +R++ + A +NG K Q++ + T +
Sbjct: 142 EAPEPSASIVVRVRGALEAQQIRAIRHLVASAVNGLKPQRVSIVDEAGQLLADGAATDPE 201
Query: 126 TPCGEGSKTWDRFQMRIHKRVIDLHS 49
G+ +T F+ R+ K+V D+ S
Sbjct: 202 QALGDERRT--TFEKRMRKQVEDIVS 225
>UniRef50_Q55GH4 Cluster: Glycogen synthase; n=19; Eukaryota|Rep:
Glycogen synthase - Dictyostelium discoideum AX4
Length = 878
Score = 33.5 bits (73), Expect = 2.0
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -2
Query: 348 TSNMAAAVVSGKDIEKPQAEVSPIH--RIRITLTSPNVRSLEKVCADXINGAKKQKLRVK 175
T+ A + I P+ V PI+ + ITL SPN S+ + +D +N KKQ+ + +
Sbjct: 699 TTTTTATTATTAPITTPKPNVIPINTGKENITLLSPN--SMSSLLSDSLNEFKKQQQQQQ 756
Query: 174 GPVRMPTKILRITTRKTPCGEGSKT 100
T TT TP + T
Sbjct: 757 QSKTPTTPTTTSTTTTTPSTTAAAT 781
>UniRef50_A3DNR2 Cluster: Putative uncharacterized protein; n=1;
Staphylothermus marinus F1|Rep: Putative uncharacterized
protein - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 105
Score = 32.7 bits (71), Expect = 3.5
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -2
Query: 267 RITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTP 121
R+ +++P + +LEK +N AKK+KL++ G + K I +R P
Sbjct: 3 RLKMSNPAIEALEKEIESILNEAKKKKLKIIGDAKKKAK--EILSRPIP 49
>UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
SSU ribosomal protein S10P - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 78
Score = 32.3 bits (70), Expect = 4.7
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = -2
Query: 162 MPTKILRITT-RKTPCGEGSKTWDRFQMRIHKRVIDL-HSPSEIVKQITSINI 10
+PT+I + T R + S+ ++F+MR+H+R+I+L +S + + +TS+++
Sbjct: 3 LPTRIRKYTVLRSLHVNKDSR--EQFEMRVHRRMIELVNSTDKAISSLTSVHL 53
>UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S10 -
Mycoplasma hyopneumoniae (strain 232)
Length = 106
Score = 32.3 bits (70), Expect = 4.7
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -2
Query: 270 IRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 91
I+I L S + R ++ I A++ + +GPV +PT I T K+ ++
Sbjct: 6 IKIKLKSFDHRQIDAAAKKIILLARELNIETRGPVPLPTS-RAIYTILRSVHINKKSREQ 64
Query: 90 FQMRIHKRVIDL 55
F+ R HKR++ L
Sbjct: 65 FESRTHKRLVIL 76
>UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-128 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 226
Score = 31.9 bits (69), Expect = 6.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 165 RMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRV 64
R+P ++ + +TPC S W+R ++R+H RV
Sbjct: 8 RLPLRVY-VDEAETPCWRASADWERGELRLHYRV 40
>UniRef50_Q5WKM9 Cluster: 3-dehydroquinate dehydratase; n=1;
Bacillus clausii KSM-K16|Rep: 3-dehydroquinate
dehydratase - Bacillus clausii (strain KSM-K16)
Length = 256
Score = 31.9 bits (69), Expect = 6.2
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 67 SLVDSHLKTIPGL*TFTTRSFT-GGDTQDLGWHANWALYTQLLFLGSIDXVSTDL 228
SL+ +H K IP L FT RS GG+ + ALY Q++ LG +D V +L
Sbjct: 66 SLLKAHSKGIPIL--FTRRSIREGGEPITVSEQEVTALYEQVMKLGLVDVVDVEL 118
>UniRef50_A5ED35 Cluster: Flagellar basal body M-ring protein; n=4;
Alphaproteobacteria|Rep: Flagellar basal body M-ring
protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182)
Length = 535
Score = 31.9 bits (69), Expect = 6.2
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = -2
Query: 306 EKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRITTRK 127
E P+ S + R+R L + +R++ + A +NG K Q++ + V ++L T+
Sbjct: 160 ETPEPSASIVVRVRGALDAAQIRAIRHLVASAVNGLKPQRVSI---VDEAGQLLADGTQT 216
Query: 126 TPCGE-GSKTWDRFQMRIHKRVIDLHS 49
+ G + + F+ R+ K+V D+ S
Sbjct: 217 DIDQQVGDERRNTFEKRMRKQVEDIVS 243
>UniRef50_Q4N6G9 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
parva
Length = 268
Score = 31.9 bits (69), Expect = 6.2
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 33 SRFQRESVGRSLSCGFSSENDPRSLNLHHKEFYGW*YAGSWLACEL--GPLHAASVSWLH 206
+R QR+S GR+ GF S ++P+S + K G+ G +L +L G H + +H
Sbjct: 183 ARVQRDSAGRNRGFGFISYDNPQSAVVAIKNMNGFSVGGKYLKVQLKKGEEHYMQMEPIH 242
>UniRef50_A5E2G1 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1125
Score = 31.9 bits (69), Expect = 6.2
Identities = 26/128 (20%), Positives = 49/128 (38%)
Frame = -2
Query: 390 TIFD*KVVYLGRNSTSNMAAAVVSGKDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADX 211
TI + +Y +NS ++ + V +I++P+ + P ++ ++P RS
Sbjct: 505 TIQESPELYPSQNSQKHLKSPVTEVPEIKEPEVQAPPPPKMAKAKSAPPPRSNPYAPTAG 564
Query: 210 INGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 31
N KQ+ GPV T T+ K +++ + P + VK
Sbjct: 565 ANAQAKQRRNKYGPVDFSTPSKDTTSSKYGPTSSQSNTSKYRAELGNDFKSSFHPPQDVK 624
Query: 30 QITSINIE 7
+ N E
Sbjct: 625 NNNTYNGE 632
>UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7;
Mollicutes|Rep: 30S ribosomal protein S10 - Mycoplasma
pulmonis
Length = 103
Score = 31.5 bits (68), Expect = 8.1
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 201 AKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP 46
A K+K+ GP+ +PTK I T K+ ++F+ R +KR I ++P
Sbjct: 29 ASKEKIDYSGPIPLPTK-REIFTILRSVHVNKKSREQFERRTYKRFIVFNNP 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,069,630
Number of Sequences: 1657284
Number of extensions: 9214179
Number of successful extensions: 21353
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 20940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21336
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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