Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k19r
         (439 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   187   5e-48
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   187   5e-48
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   187   5e-48
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   182   1e-46
BT030436-1|ABO52856.1|  703|Drosophila melanogaster IP18437p pro...    30   1.6  
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    30   1.6  
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    30   1.6  
BT022291-1|AAY54707.1|  336|Drosophila melanogaster IP08195p pro...    29   2.1  
AE014296-1731|AAF50208.2|  213|Drosophila melanogaster CG32044-P...    29   2.1  

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  187 bits (456), Expect = 5e-48
 Identities = 89/106 (83%), Positives = 94/106 (88%), Gaps = 1/106 (0%)
 Frame = -2

Query: 315 KDIEKPQA-EVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRI 139
           KDIEKP   + + +HRIRITLTS NVRSLE VC D INGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 138 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPG
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPG 111


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  187 bits (456), Expect = 5e-48
 Identities = 89/106 (83%), Positives = 94/106 (88%), Gaps = 1/106 (0%)
 Frame = -2

Query: 315 KDIEKPQA-EVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRI 139
           KDIEKP   + + +HRIRITLTS NVRSLE VC D INGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 138 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPG
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPG 111


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  187 bits (456), Expect = 5e-48
 Identities = 89/106 (83%), Positives = 94/106 (88%), Gaps = 1/106 (0%)
 Frame = -2

Query: 315 KDIEKPQA-EVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRI 139
           KDIEKP   + + +HRIRITLTS NVRSLE VC D INGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 138 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPG
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPG 111


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  182 bits (444), Expect = 1e-46
 Identities = 87/106 (82%), Positives = 93/106 (87%), Gaps = 1/106 (0%)
 Frame = -2

Query: 315 KDIEKPQA-EVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGPVRMPTKILRI 139
           KDIEKP   + + +H IRITLTS NVRSLE VC D INGAK Q LRV+GPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRI 65

Query: 138 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPG 1
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPG
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPG 111


>BT030436-1|ABO52856.1|  703|Drosophila melanogaster IP18437p
           protein.
          Length = 703

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = -2

Query: 348 TSNMAAAVVSGKDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGP 169
           T  ++ A   GK  +KP+AEV P+ R RI    P     +    D    +       + P
Sbjct: 611 TGKLSKASAKGK-ADKPRAEVKPVVRSRIDTKPPKSMDRKLAKRDEKKSSPTTTPAARAP 669

Query: 168 VRM---PTKILRITTRKTPCGEGSKT 100
           V     P  + R  T+ +P    +K+
Sbjct: 670 VAQNAKPKVLSRPATKSSPSSTPAKS 695


>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
           protein.
          Length = 5327

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = -2

Query: 348 TSNMAAAVVSGKDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGP 169
           T  ++ A   GK  +KP+AEV P+ R RI    P     +    D    +       + P
Sbjct: 618 TGKLSKASAKGK-ADKPRAEVKPVVRSRIDTKPPKSMDRKLAKRDEKKSSPTATPAARAP 676

Query: 168 VRM---PTKILRITTRKTPCGEGSKT 100
           V     P  + R  T+ +P    +K+
Sbjct: 677 VAQNAKPKVLSRPATKSSPSSTPAKS 702


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
           protein.
          Length = 5412

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = -2

Query: 348 TSNMAAAVVSGKDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADXINGAKKQKLRVKGP 169
           T  ++ A   GK  +KP+AEV P+ R RI    P     +    D    +       + P
Sbjct: 665 TGKLSKASAKGK-ADKPRAEVKPVVRSRIDTKPPKSMDRKLAKRDEKKSSPTTTPAARAP 723

Query: 168 VRM---PTKILRITTRKTPCGEGSKT 100
           V     P  + R  T+ +P    +K+
Sbjct: 724 VAQNAKPKVLSRPATKSSPSSTPAKS 749


>BT022291-1|AAY54707.1|  336|Drosophila melanogaster IP08195p
           protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = -1

Query: 331 RCSVRQRH*ETPGRGLPYPPHQDHSYFXQCALAREGLC*XNQ-WSQET---EAACKGPSS 164
           +C  RQ     P   L  P  Q H      AL+ E L    + W Q T   E    GPSS
Sbjct: 3   KCVSRQ---SAPLHELASPDAQHHQSVLTIALSHEDLAQALKIWQQLTGSNEYIAAGPSS 59

Query: 163 HANQDPAYH 137
           H  ++P Y+
Sbjct: 60  HQEEEPFYY 68


>AE014296-1731|AAF50208.2|  213|Drosophila melanogaster CG32044-PA
           protein.
          Length = 213

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = -1

Query: 331 RCSVRQRH*ETPGRGLPYPPHQDHSYFXQCALAREGLC*XNQ-WSQET---EAACKGPSS 164
           +C  RQ     P   L  P  Q H      AL+ E L    + W Q T   E    GPSS
Sbjct: 38  KCVSRQ---SAPLHELASPDAQHHQSVLTIALSHEDLAQALKIWQQLTGSNEYIAAGPSS 94

Query: 163 HANQDPAYH 137
           H  ++P Y+
Sbjct: 95  HQEEEPFYY 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,436,310
Number of Sequences: 53049
Number of extensions: 444181
Number of successful extensions: 971
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)