Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k19f
         (507 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   204   7e-53
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   204   7e-53
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   204   7e-53
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   199   2e-51
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    29   2.7  
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    29   2.7  
BT030436-1|ABO52856.1|  703|Drosophila melanogaster IP18437p pro...    29   3.6  

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  204 bits (497), Expect = 7e-53
 Identities = 98/115 (85%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 125 KDIEKPQA-EVSPIHRIRITLTSPNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 301
           KDIEKP   + + +HRIRITLTS NVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 302 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 466
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  204 bits (497), Expect = 7e-53
 Identities = 98/115 (85%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 125 KDIEKPQA-EVSPIHRIRITLTSPNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 301
           KDIEKP   + + +HRIRITLTS NVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 302 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 466
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  204 bits (497), Expect = 7e-53
 Identities = 98/115 (85%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 125 KDIEKPQA-EVSPIHRIRITLTSPNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 301
           KDIEKP   + + +HRIRITLTS NVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 302 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 466
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  199 bits (485), Expect = 2e-51
 Identities = 96/115 (83%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = +2

Query: 125 KDIEKPQA-EVSPIHRIRITLTSPNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 301
           KDIEKP   + + +H IRITLTS NVRSLE VC DLINGAK Q LRV+GPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRI 65

Query: 302 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 466
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
           protein.
          Length = 5327

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 7/125 (5%)
 Frame = +2

Query: 92  TSNMAAAVVSGKDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADLINGAKKQKLRVKGP 271
           T  ++ A   GK  +KP+AEV P+ R RI    P     +    D    +       + P
Sbjct: 618 TGKLSKASAKGK-ADKPRAEVKPVVRSRIDTKPPKSMDRKLAKRDEKKSSPTATPAARAP 676

Query: 272 VRM---PTKILRITTRKTPCGEGSKTW----DRFQMRIHKRVIDLHSPSEIVKQITSINI 430
           V     P  + R  T+ +P    +K+     +R  +   ++   + + S + +++TS   
Sbjct: 677 VAQNAKPKVLSRPATKSSPSSTPAKSAKEANNRKVLESKQQAARVQATSTVSRRVTSTAS 736

Query: 431 EPGVE 445
           E  V+
Sbjct: 737 ERRVQ 741


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
            protein.
          Length = 5412

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 7/125 (5%)
 Frame = +2

Query: 92   TSNMAAAVVSGKDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADLINGAKKQKLRVKGP 271
            T  ++ A   GK  +KP+AEV P+ R RI    P     +    D    +       + P
Sbjct: 665  TGKLSKASAKGK-ADKPRAEVKPVVRSRIDTKPPKSMDRKLAKRDEKKSSPTTTPAARAP 723

Query: 272  VRM---PTKILRITTRKTPCGEGSKTW----DRFQMRIHKRVIDLHSPSEIVKQITSINI 430
            V     P  + R  T+ +P    +K+     +R  +   ++   + + S + +++TS   
Sbjct: 724  VAQNAKPKVLSRPATKSSPSSTPAKSAKEANNRKVLESKQQAARVQATSTVSRRVTSTAS 783

Query: 431  EPGVE 445
            E  V+
Sbjct: 784  ERRVQ 788


>BT030436-1|ABO52856.1|  703|Drosophila melanogaster IP18437p
           protein.
          Length = 703

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = +2

Query: 92  TSNMAAAVVSGKDIEKPQAEVSPIHRIRITLTSPNVRSLEKVCADLINGAKKQKLRVKGP 271
           T  ++ A   GK  +KP+AEV P+ R RI    P     +    D    +       + P
Sbjct: 611 TGKLSKASAKGK-ADKPRAEVKPVVRSRIDTKPPKSMDRKLAKRDEKKSSPTTTPAARAP 669

Query: 272 VRM---PTKILRITTRKTPCGEGSKT 340
           V     P  + R  T+ +P    +K+
Sbjct: 670 VAQNAKPKVLSRPATKSSPSSTPAKS 695


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,557,485
Number of Sequences: 53049
Number of extensions: 540727
Number of successful extensions: 1310
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)