Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k18f
(409 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identic... 65 1e-11
At3g05420.2 68416.m00594 acyl-CoA binding family protein similar... 50 5e-07
At3g05420.1 68416.m00593 acyl-CoA binding family protein similar... 50 5e-07
At5g27630.1 68418.m03310 acyl-CoA binding family protein similar... 50 6e-07
At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / AC... 45 2e-05
At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) iden... 44 5e-05
At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / AC... 41 3e-04
At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / AC... 41 3e-04
At1g51355.1 68414.m05776 expressed protein 36 0.010
At5g55770.1 68418.m06951 DC1 domain-containing protein contains ... 31 0.22
At4g03170.1 68417.m00433 hypothetical protein 31 0.30
At3g47700.1 68416.m05196 chromosome structural maintenance prote... 30 0.52
At4g00300.1 68417.m00037 fringe-related protein + weak similarit... 29 1.2
At1g33250.1 68414.m04110 fringe-related protein + weak similarit... 29 1.2
At1g78370.1 68414.m09133 glutathione S-transferase, putative sim... 29 1.6
At1g55560.1 68414.m06359 multi-copper oxidase type I family prot... 29 1.6
At1g20600.1 68414.m02573 DNA-binding protein-related low similar... 29 1.6
At5g06850.1 68418.m00774 C2 domain-containing protein contains I... 28 2.1
At2g24010.1 68415.m02868 serine carboxypeptidase S10 family prot... 28 2.1
At5g35604.1 68418.m04242 hypothetical protein 27 3.7
At3g26750.1 68416.m03346 expressed protein 27 3.7
At3g09810.1 68416.m01169 isocitrate dehydrogenase, putative / NA... 27 3.7
At1g53680.1 68414.m06108 glutathione S-transferase, putative sim... 27 3.7
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 27 4.8
At3g13400.1 68416.m01685 multi-copper oxidase type I family prot... 27 4.8
At1g60610.2 68414.m06823 expressed protein 27 4.8
At1g60610.1 68414.m06822 expressed protein 27 4.8
At1g32850.1 68414.m04048 ubiquitin carboxyl-terminal hydrolase f... 27 4.8
At3g13390.1 68416.m01684 multi-copper oxidase type I family prot... 27 6.4
At1g16370.1 68414.m01958 transporter-related low similarity to o... 27 6.4
At4g33910.1 68417.m04812 oxidoreductase, 2OG-Fe(II) oxygenase fa... 26 8.5
At3g61740.1 68416.m06923 PHD finger family protein (ATX3) contai... 26 8.5
At2g23096.1 68415.m02755 oxidoreductase, 2OG-Fe(II) oxygenase fa... 26 8.5
At1g55570.1 68414.m06360 multi-copper oxidase type I family prot... 26 8.5
>At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identical
to acyl-CoA-binding protein (ACBP) [Arabidopsis
thaliana] SWISS-PROT:P57752
Length = 92
Score = 65.3 bits (152), Expect = 1e-11
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +1
Query: 61 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAW 234
M L E+F++ A+KV PS+++ L LY LYKQA G V+ ++P + E AKW AW
Sbjct: 1 MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60
Query: 235 NGRKGISQDDAKKQYIENAEKL 300
+G S ++A YI ++L
Sbjct: 61 KAVEGKSSEEAMNDYITKVKQL 82
>At3g05420.2 68416.m00594 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 669
Score = 50.4 bits (115), Expect = 5e-07
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 103 RNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQ 276
+N +K DD L LY+LY+QAT+G N +PS VE +KWK+W G + +A +
Sbjct: 33 KNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQGLGTMPSIEAMRL 92
Query: 277 YIENAEK 297
+++ E+
Sbjct: 93 FVKILEE 99
>At3g05420.1 68416.m00593 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 668
Score = 50.4 bits (115), Expect = 5e-07
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 103 RNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQ 276
+N +K DD L LY+LY+QAT+G N +PS VE +KWK+W G + +A +
Sbjct: 33 KNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQGLGTMPSIEAMRL 92
Query: 277 YIENAEK 297
+++ E+
Sbjct: 93 FVKILEE 99
>At5g27630.1 68418.m03310 acyl-CoA binding family protein similar to
RING finger rngB protein, cytosolic - Dictyostelium
discoideum, PIR:S68824; contains Pfam profiles PF01344:
Kelch motif, PF00887: Acyl CoA binding protein (ACBP)
Length = 648
Score = 50.0 bits (114), Expect = 6e-07
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +1
Query: 100 VRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKK 273
V+ +K S+D +L LY+L++QAT+G +I +PS VE +KWK+W G + +A +
Sbjct: 33 VKQLSSKFSNDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQSKWKSWQGLGTMPSIEAMR 92
Query: 274 QYIENAEK 297
+++ E+
Sbjct: 93 LFVKILEE 100
>At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / ACBP,
putative similar to acyl-CoA binding protein 2
[Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 338
Score = 44.8 bits (101), Expect = 2e-05
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 118 KPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQYIENA 291
K S++ L LY LYK AT G QPS L AKW+AW + ++A ++YI+
Sbjct: 116 KVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIDLV 175
Query: 292 EKLH 303
+L+
Sbjct: 176 TQLY 179
>At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2)
identical to acyl-CoA binding protein 2 [Arabidopsis
thaliana] gi|12039034|gb|AAG46057
Length = 354
Score = 43.6 bits (98), Expect = 5e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 121 PSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQYIENAE 294
PSD + LY LYK AT G QPS L AKW+AW + ++A ++YIE
Sbjct: 128 PSDVQQ-QLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEIVT 186
Query: 295 KLH 303
+L+
Sbjct: 187 QLY 189
>At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 362
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 130 DENLALYSLYKQATIGDVNIAQPSGLVESA--KWKAWNGRKGISQDDAKKQYIENAEK 297
+ + L+ L+K AT G AQP ++ SA KW AW +SQ++A +QY+ K
Sbjct: 254 EAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEAMEQYLALVSK 311
>At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 364
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 130 DENLALYSLYKQATIGDVNIAQPSGLVESA--KWKAWNGRKGISQDDAKKQYIENAEK 297
+ + L+ L+K AT G AQP ++ SA KW AW +SQ++A +QY+ K
Sbjct: 254 EAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEAMEQYLALVSK 311
>At1g51355.1 68414.m05776 expressed protein
Length = 116
Score = 35.9 bits (79), Expect = 0.010
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 53 NTKCLSTSNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSP 199
N+ STS+++ SP T PSPV+ + CTP SR+P ++ P+P
Sbjct: 32 NSDVTSTSSTSTSPT--STATPSPVSAESGCCTPEKSRIPEMLTCPPAP 78
>At5g55770.1 68418.m06951 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 695
Score = 31.5 bits (68), Expect = 0.22
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 207 CGERQVEGMERSQRHLPRRCQEAIHRKCGETPLQIR 314
CG + + ++ S+ + +CQ HR+C E+PL+I+
Sbjct: 156 CGACKGKMLDTSKDYACLQCQRKFHRECVESPLEIK 191
>At4g03170.1 68417.m00433 hypothetical protein
Length = 250
Score = 31.1 bits (67), Expect = 0.30
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 178 DVNIAQPSGLVESAKWKAWNGRKGISQDDAKKQYIEN 288
DV++ P G V+ ++K WNG K KQ++E+
Sbjct: 178 DVSVYGPDGKVQQMEFKMWNGDKTPVLTSGWKQFVED 214
>At3g47700.1 68416.m05196 chromosome structural maintenance
protein-related contains weak similarity to
RAD50-interacting protein 1 [Homo sapiens]
gi|11967435|gb|AAG42101
Length = 795
Score = 30.3 bits (65), Expect = 0.52
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 58 KMSLDEQ---FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAK 222
++ LDE+ FK+ D RNW K DE ++ ++Y+ I + + S ++E +K
Sbjct: 456 EIELDERLVKFKEEIDNDRNWTAK-VQDELISSSNVYRPPIISSIFLQHLSSIIERSK 512
>At4g00300.1 68417.m00037 fringe-related protein + weak similarity
to Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 785
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Frame = -3
Query: 308 LEWSFSAFSMYCFL-ASSWEMPLRPFHAFHL-------ALSTRPLGWAMLTSPMVACLYR 153
+ W ++ ++ A E+P R F+ +HL A +TRP+ W P V
Sbjct: 356 ISWGYTVQITRTYMPARMMEVPTRTFNDWHLRSDFTNLAFNTRPVTWTDCQRPRVFYFSH 415
Query: 152 EYSARFSSSLGLVFQFL 102
+S SS + Q+L
Sbjct: 416 AFSNSSSSDTTTISQYL 432
>At1g33250.1 68414.m04110 fringe-related protein + weak similarity
to Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 548
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 271 SWHRLGRCLCDRSMPSTWRSPQDRWAGQC 185
+WH R LC R+ P+T P GQC
Sbjct: 508 NWHLAPRRLCCRATPTTTNEPLRLTVGQC 536
>At1g78370.1 68414.m09133 glutathione S-transferase, putative
similar to 2,4-D inducible glutathione S-transferase
GI:2920666 from [Glycine max]
Length = 217
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 217 AKWKAWNGRKGISQDDAKKQYIENAEKLHSK 309
A++K W G+KG Q+ KK++IE + L S+
Sbjct: 109 AQFKVW-GKKGEEQEAGKKEFIEAVKILESE 138
>At1g55560.1 68414.m06359 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 549
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 183 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 97
N+TYG+ GV +KV+++ G P PNL
Sbjct: 31 NVTYGTASPLGVPQKVILING-QFPGPNL 58
>At1g20600.1 68414.m02573 DNA-binding protein-related low similarity
to RAV2 [Arabidopsis thaliana] GI:3868859
Length = 237
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 178 DVNIAQPSGLVESAKWKAWNGRK 246
DV++ P G V+ K+K WNG K
Sbjct: 167 DVSVYGPDGEVQQMKFKMWNGDK 189
>At5g06850.1 68418.m00774 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 669
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -3
Query: 323 IIYAYLEWSFSAFSMYCFLASSWEMPLRPFHAFHLALSTRPLGWAMLTSP 174
I+ Y E +Y FL W RP H H + T+ + WA SP
Sbjct: 505 ILICYPELILPTTFLYMFLIGLWNFRFRPRHPAH--MDTK-VSWAEAASP 551
>At2g24010.1 68415.m02868 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
Length = 425
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 55 HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQ-ATIGDVNIAQPSGLVESAKWKA 231
H M D+ +K + K SD N ALY Y++ + +I PS + ++ + K
Sbjct: 203 HAMISDKTYKSILKHCSFTADKTSDKCNWALYFAYREFGKVNGYSIYSPSCVHQTNQTKF 262
Query: 232 WNGR 243
+GR
Sbjct: 263 LHGR 266
>At5g35604.1 68418.m04242 hypothetical protein
Length = 298
Score = 27.5 bits (58), Expect = 3.7
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +2
Query: 86 RSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKASPKTM 265
RSP R G SP + T C+ RL T+ P + +PS + + K T+
Sbjct: 69 RSPRRPSRGNSSPRRDKARARTDCSPRLSPPSRTMGPPPPVATSPSSQ-WSGEKTDHNTV 127
Query: 266 PRSNTSKMRRNSTPNTHKLLL 328
P+ + R TP K++L
Sbjct: 128 PQKEGGEHR--DTPPRSKVVL 146
>At3g26750.1 68416.m03346 expressed protein
Length = 526
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -1
Query: 289 HFRCIASWHRLGRC-LCDRS-MPS-TWRSPQDRWAGQC 185
HF C + +RL + L D S MPS WR D W G C
Sbjct: 156 HFYCRSCSNRLTKKELLDFSEMPSINWRESADNWFGTC 193
>At3g09810.1 68416.m01169 isocitrate dehydrogenase, putative / NAD+
isocitrate dehydrogenase, putative strong similarity to
isocitrate dehydrogenase (NAD+) GB:CAA65502 GI:3021506
[Nicotiana tabacum]
Length = 374
Score = 27.5 bits (58), Expect = 3.7
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = -2
Query: 345 EIYL--ILSNNLCVFGVEFLRIFDVLLLGIVLGDAFATVPCLPLGALHKTAGLGNVNITY 172
EIY ++ +N C+ V+ +FDVL++ + GD + + +G L T + N+
Sbjct: 236 EIYYEKVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSM-NIG-ED 293
Query: 171 GSLLVQGVQRKVLIVTGLGLPVPNLIGDLFELLVERHFVLS 49
G L + V + G+ L P + L +++ RH L+
Sbjct: 294 GIALAEAVHGSAPDIAGMNLANPTAL-LLSGVMMLRHLKLN 333
>At1g53680.1 68414.m06108 glutathione S-transferase, putative
similar to GI:2853219 from [Carica papaya]
Length = 224
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 226 KAWNGRKGISQDDAKKQYIENAEKLHSK 309
K W +KG Q+ KK+++E+ + L ++
Sbjct: 116 KIWGNKKGEEQEKGKKEFLESLKVLEAE 143
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 27.1 bits (57), Expect = 4.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 73 EQFKQVADKVRNWKTKPSDDENLALYSLYKQATI-GDVNIAQPSGLVE 213
E+F+ + + VR W TKP ++A + LYK I I Q G+ E
Sbjct: 729 EEFRLLFEYVREWNTKPKLC-HIAQFVLYKTFNILPPTEIVQVKGIGE 775
>At3g13400.1 68416.m01685 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 183 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 97
N+TYG+ G+ ++V+++ G P PNL
Sbjct: 32 NVTYGTAAPLGIPQQVILING-QFPGPNL 59
>At1g60610.2 68414.m06823 expressed protein
Length = 340
Score = 27.1 bits (57), Expect = 4.8
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 67 LDEQFKQVADKVRNWKTKPSDDE---NLALYSLYKQATIGDVNIAQPSGLVESAKWKAWN 237
L ++ KQVA + +NW K +E N +L + + G+ N A G+ + + K
Sbjct: 207 LVDKIKQVAVEAQNWHYKAKYNESVVNALKVNLQQVMSHGNDNNAVGGGVADHHQMKEGF 266
Query: 238 GRKGISQDDAKKQYI 282
G I + A Y+
Sbjct: 267 GDSEIDDEAASYNYL 281
>At1g60610.1 68414.m06822 expressed protein
Length = 340
Score = 27.1 bits (57), Expect = 4.8
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 67 LDEQFKQVADKVRNWKTKPSDDE---NLALYSLYKQATIGDVNIAQPSGLVESAKWKAWN 237
L ++ KQVA + +NW K +E N +L + + G+ N A G+ + + K
Sbjct: 207 LVDKIKQVAVEAQNWHYKAKYNESVVNALKVNLQQVMSHGNDNNAVGGGVADHHQMKEGF 266
Query: 238 GRKGISQDDAKKQYI 282
G I + A Y+
Sbjct: 267 GDSEIDDEAASYNYL 281
>At1g32850.1 68414.m04048 ubiquitin carboxyl-terminal hydrolase
family protein similar to ubiquitin-specific protease
UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 892
Score = 27.1 bits (57), Expect = 4.8
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 124 SDDENLALYSLYKQATIGDV--NIAQPSGLV-ESAK-WKAWNGRKGISQDDAKKQYIENA 291
S DE+ + L KQA+IG + + G+ E A+ W + +K + D + +Q +E A
Sbjct: 155 SRDESTTIIRLSKQASIGQLYEMVCAGKGVAKEKARIWDYFEKKKSVLLDPSSEQSVEEA 214
>At3g13390.1 68416.m01684 multi-copper oxidase type I family protein
nearly identical to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Multicopper
oxidase domain PF00394
Length = 554
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 183 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 97
N+TYG++ GV ++V+++ G P PN+
Sbjct: 33 NVTYGTVSPLGVPQQVILING-QFPGPNV 60
>At1g16370.1 68414.m01958 transporter-related low similarity to
organic cation transporter OCTN1 from [Homo sapiens]
GI:2605501, [Mus musculus] GI:4126605, [Rattus
norvegicus] GI:5679326; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 521
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = -1
Query: 382 FKKIVRKSII*VGNLFNSK**FMRIWSGVSPHFRCIASWHRLGRCLCDRSMPSTWRSPQD 203
F + + S++ + LF+++ F+ +++ P +WH L +CD S + P+
Sbjct: 43 FWQFFQISLVGLALLFDAQQIFITVYTDAYP------TWHCLNHTICDPSASDICKLPRS 96
Query: 202 RW 197
W
Sbjct: 97 AW 98
>At4g33910.1 68417.m04812 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Gallus gallus [GI:212530], Rattus
norvegicus [GI:474940], Drosophila melanogaster
[GI:4336512]; contains PF03171 2OG-Fe(II) oxygenase
superfamily domain
Length = 288
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 112 KTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 231
K KP + L YS++ TI ++ + + KW A
Sbjct: 238 KVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVA 277
>At3g61740.1 68416.m06923 PHD finger family protein (ATX3) contains
Pfam domains PF00628: PHD-finger and PF00855: PWWP
domain; identical to cDNA trithorax 3 (ATX3) partial cds
GI:15217142
Length = 799
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 216 RQVEGMERSQRHLPRRCQEAIHRKC 290
R VE E ++ + RCQ A+H++C
Sbjct: 497 RWVEDWEENKMIICNRCQVAVHQEC 521
>At2g23096.1 68415.m02755 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profile: PF03171
oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 274
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 94 DKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 231
+K K KP + + Y+L+ TI ++ +++ KW A
Sbjct: 219 EKCVGLKVKPRQGDAIFFYNLFPNGTIDQTSLHGSCPVIKGEKWVA 264
>At1g55570.1 68414.m06360 multi-copper oxidase type I family protein
nearly identical to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Multicopper
oxidase domain PF00394
Length = 555
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 183 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 97
N+TYG+ GV ++V+++ G P PN+
Sbjct: 34 NVTYGTASPLGVPQQVILING-QFPGPNI 61
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,476,013
Number of Sequences: 28952
Number of extensions: 208430
Number of successful extensions: 694
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 605614832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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