Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k16f
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 130 8e-31
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 130 8e-31
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 111 5e-25
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 111 5e-25
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 110 7e-25
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 110 7e-25
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 96 2e-20
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 96 2e-20
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 82 4e-16
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 82 4e-16
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 79 3e-15
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 79 3e-15
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 69 4e-12
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 65 3e-11
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 65 4e-11
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 62 2e-10
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 44 9e-05
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 42 4e-04
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 42 5e-04
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 42 5e-04
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 41 6e-04
Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical pr... 40 0.002
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 37 0.010
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 35 0.041
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 33 0.17
U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82256-6|CAB05117.2| 616|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical... 29 2.0
Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calciu... 29 3.6
L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calciu... 29 3.6
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 4.7
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 28 6.2
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 27 8.2
AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 130 bits (314), Expect = 8e-31
Identities = 65/160 (40%), Positives = 105/160 (65%), Gaps = 6/160 (3%)
Frame = +1
Query: 160 RQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLA 339
R++ ++ +R SNVF+MF Q Q+ EFKEAF ++D ++DG I + DL+ F SLG+
Sbjct: 4 RKTVNRRQRPQRATSNVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEV 63
Query: 340 SEKELDEMVGEASG--PINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSER 507
+E+ +D M+ EA G PINFT LTLF +++ G+D ++V+ NAF+ FDE+ GK++ E
Sbjct: 64 TEQFIDSMINEAPGAQPINFTMFLTLFGEKLT-GTDPEEVIRNAFQCFDEDNSGKLNEEH 122
Query: 508 LRHALMTWGDKFSADEVDEAYDQMDI--DDKGYIDTTKLI 621
LR L T G+++S ++VDE + I Y++ T+++
Sbjct: 123 LRELLTTMGERYSEEQVDELFRDAPIKGGQFDYVEFTRML 162
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 130 bits (314), Expect = 8e-31
Identities = 65/160 (40%), Positives = 105/160 (65%), Gaps = 6/160 (3%)
Frame = +1
Query: 160 RQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLA 339
R++ ++ +R SNVF+MF Q Q+ EFKEAF ++D ++DG I + DL+ F SLG+
Sbjct: 4 RKTVNRRQRPQRATSNVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEV 63
Query: 340 SEKELDEMVGEASG--PINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSER 507
+E+ +D M+ EA G PINFT LTLF +++ G+D ++V+ NAF+ FDE+ GK++ E
Sbjct: 64 TEQFIDSMINEAPGAQPINFTMFLTLFGEKLT-GTDPEEVIRNAFQCFDEDNSGKLNEEH 122
Query: 508 LRHALMTWGDKFSADEVDEAYDQMDI--DDKGYIDTTKLI 621
LR L T G+++S ++VDE + I Y++ T+++
Sbjct: 123 LRELLTTMGERYSEEQVDELFRDAPIKGGQFDYVEFTRML 162
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 111 bits (266), Expect = 5e-25
Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Frame = +1
Query: 163 QSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLAS 342
++++ KR+GS + F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 343 EKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRH 516
+ ++D M+ EASGPINFT LTLF R++ G+D + +I AF FD++ GKI + L
Sbjct: 62 DSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIIGAFAMFDKKDCGKIKEDDLIK 120
Query: 517 ALMT-WGDKFSADEVDEAYDQMDIDDKGYID 606
L G+ DEV Y + G +D
Sbjct: 121 ILQNKRGEPLDEDEVKAMYKGKPPIEGGEVD 151
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 111 bits (266), Expect = 5e-25
Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Frame = +1
Query: 163 QSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLAS 342
++++ KR+GS + F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 343 EKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRH 516
+ ++D M+ EASGPINFT LTLF R++ G+D + +I AF FD++ GKI + L
Sbjct: 62 DSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIIGAFAMFDKKDCGKIKEDDLIK 120
Query: 517 ALMT-WGDKFSADEVDEAYDQMDIDDKGYID 606
L G+ DEV Y + G +D
Sbjct: 121 ILQNKRGEPLDEDEVKAMYKGKPPIEGGEVD 151
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 110 bits (265), Expect = 7e-25
Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Frame = +1
Query: 163 QSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLAS 342
++++ KR+GS + F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 343 EKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRH 516
+ ++D M+ EASGPINFT LTLF R++ G+D + ++ AF FD++ GKI + L
Sbjct: 62 DSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIVGAFAMFDKKDCGKIKEDDLIK 120
Query: 517 ALMT-WGDKFSADEVDEAYDQMDIDDKGYID 606
L G+ DEV Y + G +D
Sbjct: 121 ILQNKRGEPLDEDEVKAMYKGKPPIEGGEVD 151
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 110 bits (265), Expect = 7e-25
Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Frame = +1
Query: 163 QSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLAS 342
++++ KR+GS + F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A
Sbjct: 3 KAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAP 61
Query: 343 EKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRH 516
+ ++D M+ EASGPINFT LTLF R++ G+D + ++ AF FD++ GKI + L
Sbjct: 62 DSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIVGAFAMFDKKDCGKIKEDDLIK 120
Query: 517 ALMT-WGDKFSADEVDEAYDQMDIDDKGYID 606
L G+ DEV Y + G +D
Sbjct: 121 ILQNKRGEPLDEDEVKAMYKGKPPIEGGEVD 151
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 96.3 bits (229), Expect = 2e-20
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 6/139 (4%)
Frame = +1
Query: 223 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 390
+++Q+AEFKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 391 FTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 564
F + LT+ A +M +D ++ + AF+ FD++G I + LRH + G+K + +EVDE
Sbjct: 66 FPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 565 AYDQMDIDDKGYIDTTKLI 621
+ DID G ++ + +
Sbjct: 125 MIREADIDGDGQVNYEEFV 143
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 96.3 bits (229), Expect = 2e-20
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 6/139 (4%)
Frame = +1
Query: 223 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 390
+++Q+AEFKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 391 FTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 564
F + LT+ A +M +D ++ + AF+ FD++G I + LRH + G+K + +EVDE
Sbjct: 66 FPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 565 AYDQMDIDDKGYIDTTKLI 621
+ DID G ++ + +
Sbjct: 125 MIREADIDGDGQVNYEEFV 143
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 81.8 bits (193), Expect = 4e-16
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 187 AKRTGSNV--FSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 360
+K+T V F +++++ E+K AF+L D D +G I +L SLG+ +E+EL +
Sbjct: 16 SKQTNEPVSGFDGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLD 75
Query: 361 MVGE----ASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHAL 522
MV E SG I+F + + RM+ +D +++ AF+ FD +G I ++ R+ +
Sbjct: 76 MVNEVDIDGSGTIDFGEFCQMM-KRMNKEND-SEMIREAFRVFDRDGNGFITADEFRYFM 133
Query: 523 MTWGDKFSADEVDEAYDQMDIDDKGYID 606
GD+FS EVDE ++DID G ID
Sbjct: 134 THMGDQFSDQEVDEIIAEIDIDGDGQID 161
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 81.8 bits (193), Expect = 4e-16
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = +1
Query: 187 AKRTGSNV--FSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 360
+K+T V F +++++ E+K AF+L D D +G I +L SLG+ +E+EL +
Sbjct: 16 SKQTNEPVSGFDGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLD 75
Query: 361 MVGE----ASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHAL 522
MV E SG I+F + + RM+ +D +++ AF+ FD +G I ++ R+ +
Sbjct: 76 MVNEVDIDGSGTIDFGEFCQMM-KRMNKEND-SEMIREAFRVFDRDGNGFITADEFRYFM 133
Query: 523 MTWGDKFSADEVDEAYDQMDIDDKGYID 606
GD+FS EVDE ++DID G ID
Sbjct: 134 THMGDQFSDQEVDEIIAEIDIDGDGQID 161
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 78.6 bits (185), Expect = 3e-15
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Frame = +1
Query: 205 NVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE---- 372
++ + +++ EF+EAF + D D +G I +L SLG+ +E+E+ EM+ E
Sbjct: 70 DIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDID 129
Query: 373 ASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFS 546
+G I F + + M + +++ AF+ FD++G I ++ R+ ++ G +FS
Sbjct: 130 GNGQIEFPEFCVMMKRMMK--ETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFS 187
Query: 547 ADEVDEAYDQMDIDDKGYIDTTKLI 621
+EVDE ++D+D G ID + +
Sbjct: 188 EEEVDEMIKEVDVDGDGEIDYEEFV 212
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 78.6 bits (185), Expect = 3e-15
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Frame = +1
Query: 205 NVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE---- 372
++ + +++ EF+EAF + D D +G I +L SLG+ +E+E+ EM+ E
Sbjct: 13 DIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDID 72
Query: 373 ASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFS 546
+G I F + + M + +++ AF+ FD++G I ++ R+ ++ G +FS
Sbjct: 73 GNGQIEFPEFCVMMKRMMK--ETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFS 130
Query: 547 ADEVDEAYDQMDIDDKGYIDTTKLI 621
+EVDE ++D+D G ID + +
Sbjct: 131 EEEVDEMIKEVDVDGDGEIDYEEFV 155
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 68.5 bits (160), Expect = 4e-12
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Frame = +1
Query: 220 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPI 387
F+ +++ EF +AF+L D D + + +L LG +E+EL MV E +G I
Sbjct: 17 FTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKI 76
Query: 388 NFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVD 561
+F + + M+ +D++ + + AFK FD++G I ++ +H + T G++FS +EVD
Sbjct: 77 DFGEFCKMM-KEMNKETDQELIRL-AFKVFDKDGNGYITAQEFKHFMTTMGERFSEEEVD 134
Query: 562 EAYDQMDIDDKGYIDTTKLI 621
E ++D D ID + +
Sbjct: 135 EIIREVDKDGDEQIDLDEFV 154
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Frame = +1
Query: 208 VFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG----EA 375
V S +++++ EFKEAF L D D +G I +L +LG+ +E+++ E++ +
Sbjct: 19 VISQLTEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDG 78
Query: 376 SGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSA 549
+G + F + + M + +++ AFK FD +G I + + ++ G F
Sbjct: 79 NGQVEFPEFCVMMKRIMK--ETDSEMIREAFKIFDRDGNGVITANEFKLFMINMGMCFDE 136
Query: 550 DEVDEAYDQMDIDDKGYIDTTKLI 621
EV+E +++D D G ID + +
Sbjct: 137 VEVEEMMNEVDCDGNGEIDYEEFV 160
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 64.9 bits (151), Expect = 4e-11
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Frame = +1
Query: 220 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPI 387
+S++++ E+++ F + D D+ G I ++L A +LG + ELD+++ E + I
Sbjct: 50 YSEEELQEYRQVFNMFDADRSGAIAIDELEAAIKNLGLEQTRDELDKIIDEVDQRGNHQI 109
Query: 388 NFTQLLTLFANRMSGGSDEDDVVINAFKTFD--EEGKIDSERLRHALMTWGDKFSADEVD 561
+F + + S+ ++VV F FD E G I + R L GD +D
Sbjct: 110 DFDEFCVVMRRLTMKKSNWNEVVKECFTVFDRSENGGISKKDFRFILRELGDITDNQIID 169
Query: 562 EAYDQMDIDDKGYID 606
E +++ D+D G ID
Sbjct: 170 EIFNEADVDGNGVID 184
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +1
Query: 352 LDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALM 525
++E+ + +G I+F + LT+ A +M G +D ++ + AF+ FD++G I + LRH +
Sbjct: 2 INEVDADGNGTIDFPEFLTVMARKMKG-TDSEEEIREAFRVFDKDGNGFISAAELRHVMT 60
Query: 526 TWGDKFSADEVDEAYDQMDIDDKGYI 603
G+K + +EVDE + DID G I
Sbjct: 61 NLGEKLTDEEVDEMIREADIDGDGQI 86
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +1
Query: 241 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 375
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 34 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 78
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 57.6 bits (133), Expect = 7e-09
Identities = 34/154 (22%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Frame = +1
Query: 166 SSRGSRKAKRTGSNVFSM-FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLAS 342
SSRG+ ++++ M +++K++ E+++ F + D D G IG +L+ S+G A+
Sbjct: 26 SSRGTIHSQQSQPEDIQMKYTRKELKEYRQLFNMFDTDGSGAIGNEELKQAMISIGLHAN 85
Query: 343 EKELDEMVGE----ASGPINFTQLLTLFANRMS-GGSDEDDVVINAFKTFDEE--GKIDS 501
+ E+D ++ E +G I+F + + S ++++ F+ FD++ G I
Sbjct: 86 KAEIDNVIKEVDADGNGEIDFEEFCACMKKSQNIVKSTNEELIRECFEIFDQDRNGIITE 145
Query: 502 ERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYI 603
++ +GD F + ++ + ++D+ G++
Sbjct: 146 NEFKYIAKEFGD-FDDELAEKVFRELDVSANGHL 178
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Frame = +1
Query: 238 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLL 405
AE +E F+ D + DG I + +L LG AS +++ M+ +A +G I+ + L
Sbjct: 7 AEIREVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFL 66
Query: 406 TLFANRMSGGSDEDDVVINAFKTFDE--EGKIDSERLRHALMTWGDKFSADEVDEAYDQM 579
+ ++ +E ++ + F FD+ +G I + L + G+K + E E Q
Sbjct: 67 NVLRRQICDPKEERELR-DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQG 125
Query: 580 DIDDKGYIDTTKLI 621
D+D G ID + +
Sbjct: 126 DLDHDGMIDFQEFV 139
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 229 KQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFT 396
K+ E ++ F + D + DG+I +DL LG +E E EM+ + G I+F
Sbjct: 77 KEERELRDVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQ 136
Query: 397 QLLTL 411
+ + +
Sbjct: 137 EFVNI 141
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 241 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 408
E +EAF+L D + +G I +DLR +L SE+ELDEM+ E SG ++F + +
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFME 155
Query: 409 LFA 417
+ +
Sbjct: 156 MMS 158
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 241 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 408
E +EAF+L D + +G I +DLR +L SE+ELDEM+ E SG ++F + +
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFME 155
Query: 409 LFA 417
+ +
Sbjct: 156 MMS 158
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +1
Query: 181 RKAKRTG-SNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELD 357
+ AK+T SNV +++++ KE FQ +D D+ G I NDLR F + E+ L
Sbjct: 607 QNAKQTAVSNVALNLTKEEMQRAKERFQQLDKDRKGHITVNDLRKHFREHNQKIDERVLH 666
Query: 358 EMVGEA----SGPINFTQLLTLFANRMSG 432
E++ E +G I + L++ G
Sbjct: 667 ELLNEVDLNKNGEIEIAEFFQLYSGLKGG 695
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +1
Query: 181 RKAKRTG-SNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELD 357
+ AK+T SNV +++++ KE FQ +D D+ G I NDLR F + E+ L
Sbjct: 607 QNAKQTAVSNVALNLTKEEMQRAKERFQQLDKDRKGHITVNDLRKHFREHNQKIDERVLH 666
Query: 358 EMVGEA----SGPINFTQLLTLFANRMSG 432
E++ E +G I + L++ G
Sbjct: 667 ELLNEVDLNKNGEIEIAEFFQLYSGLKGG 695
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 41.9 bits (94), Expect = 4e-04
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = +1
Query: 241 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLT 408
+ K F+ D + DG I + +LRA +G+ +E ELD M A G I+F + L
Sbjct: 22 DLKGIFREFDLNGDGYIQREELRAVMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFLV 81
Query: 409 LF-ANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDI 585
+ AN +S V D +G I LR A G S ++ Y +D
Sbjct: 82 IAKANPLSLSL---KAVFEELDV-DGDGYITRSELRTAFQRMGHSLSDQDIKAIYRHVDQ 137
Query: 586 DDKGYID 606
++ G I+
Sbjct: 138 NNDGKIN 144
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 41.5 bits (93), Expect = 5e-04
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +1
Query: 235 VAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG--EASGPINFTQLLT 408
+A+ +E F D D I + +LG+ +E E+ + VG + ++F +
Sbjct: 4 LADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFEDFVP 63
Query: 409 LFANRMSGGSDEDDV--VINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 564
+F + +S ++ V + FD+EG I+ LRH L T G++ S ++VD+
Sbjct: 64 IFQS-VSKNREKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQ 118
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 41.5 bits (93), Expect = 5e-04
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Frame = +1
Query: 247 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP---------INFTQ 399
KE F L D + DG I + + R A K MV +A+G + F +
Sbjct: 10 KEIFNLYDEELDGKIDGTQV----GDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEE 65
Query: 400 LLTLF---ANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDE 564
L ++ A G+ D K FD+E GKI + LRH L+ G++ SADE DE
Sbjct: 66 WLPMYEQLAKEKEQGTYAD--FYEGLKVFDKEETGKILAAELRHILLALGERLSADEADE 123
Query: 565 AYDQMDIDDKGYI 603
++ D +G +
Sbjct: 124 LLKGVE-DGEGMV 135
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 41.5 bits (93), Expect = 5e-04
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Frame = +1
Query: 247 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP---------INFTQ 399
KE F L D + DG I + + R A K MV +A+G + F +
Sbjct: 10 KEIFNLYDEELDGKIDGTQV----GDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEE 65
Query: 400 LLTLF---ANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDE 564
L ++ A G+ D K FD+E GKI + LRH L+ G++ SADE DE
Sbjct: 66 WLPMYEQLAKEKEQGTYAD--FYEGLKVFDKEETGKILAAELRHILLALGERLSADEADE 123
Query: 565 AYDQMDIDDKGYI 603
++ D +G +
Sbjct: 124 LLKGVE-DGEGMV 135
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 41.1 bits (92), Expect = 6e-04
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +1
Query: 211 FSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASE---KELDEMVGE-AS 378
FS FS+KQ+ F F+ D D+D I N+L+ + LG + KEL + V E
Sbjct: 535 FSEFSRKQIQYFSGIFKKYDEDQDSYIDFNELKRMMEKLGEAQTHIALKELIKKVDEDQD 594
Query: 379 GPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGKIDSE 504
G I+ + +F SG +V FKT E + E
Sbjct: 595 GKISQREFFLIFRLAASGELSCSEV----FKTLAESVDVSKE 632
>Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical
protein F40F9.8 protein.
Length = 137
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Frame = +1
Query: 262 LMDHDKDGIIGKNDLRATFDSLGRLASEKEL---DEMVGEASGPINFTQLLTLFANRMSG 432
+ D D DG+I +D+ S G S+ EL E + +G ++F LL +
Sbjct: 1 MFDEDSDGLIETDDVSHVLRSFGLNPSQTELQLVSEQTAKKNGRVSFDDLLPRVVLAIQN 60
Query: 433 GSDEDDV---VINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYI 603
+DD + AF+ + + L L + G+ + EV + + + I G I
Sbjct: 61 EEWKDDTPKQIHAAFQVITSNNYVQKDTLLQLLTSIGEPLTPQEVKQFLNHVSIRANGDI 120
Query: 604 D 606
D
Sbjct: 121 D 121
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 37.1 bits (82), Expect = 0.010
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Frame = +1
Query: 190 KRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMV- 366
K + + + + ++ E+K AF D + DG I ++L G+ ++ EL ++
Sbjct: 112 KHAATQITASNCKNKIEEYKRAFNFFDANNDGRITIDELEKAMQKCGQKPTKLELRLIMY 171
Query: 367 ---GEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTF--DEEGKIDSERLRHAL--M 525
+ +G I F + L S D + F F D++G I+ + + +
Sbjct: 172 HGDNDQNGVITFDEFAHLMNGTASMNQYTYDQLREQFDMFDKDKDGFIEKMEMLSIVREL 231
Query: 526 TWGDKFSADEVDEAYDQMDIDDKGYI 603
+ F V++ +++ DID G I
Sbjct: 232 SLQASFPRQVVEQLFNEADIDGDGKI 257
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 35.1 bits (77), Expect = 0.041
Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Frame = +1
Query: 241 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 408
+ E F L+D DKDG + +N++ A ++ + ELD + GE +G I+ + +
Sbjct: 23 QLSETFDLLDVDKDGRLSRNEIAALLRTINVEPTRVELDFIFGEMDTDKTGKISKEEFVN 82
Query: 409 LFANRMSGGSDEDDVVINAFKTFDE--EGKIDSERLRHALMTWGDKFSADEVDEAYDQMD 582
+ + ++ + F+ FD +G I + + L D + + + D
Sbjct: 83 YMKSPPIHRTTLRELEVQ-FRKFDSDGDGAITEDEMAEILRRTADLGDRAAISDMFKATD 141
Query: 583 IDDKGYI 603
++ G I
Sbjct: 142 LNGDGKI 148
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 229 KQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 375
K E ++ FQ +D D DG I +L+A +L +E+E+D+ + A
Sbjct: 276 KTEEEIRKVFQDLDKDGDGFISVAELQAVMTNLQAWLTEEEIDDGIRSA 324
>U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical
protein T09B4.4 protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.5
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 FSQKQVAEFKEAFQLMDHDKDGII-GKNDLRATFDSLGRLASEKELDEMVGEAS-GPINF 393
FSQKQ+ E +E F + G++ + LR SLG + + D + + PI F
Sbjct: 5 FSQKQIDEIRECFNF--YSTSGVLRTDSQLRCALRSLGYSPTASKTDIYFKKLNKKPIEF 62
Query: 394 TQLLTLFANRMSGGSDEDDVVINAFKTFD--EEGKIDSERLRHALMTWGDKFSADEVDEA 567
L + + + + + +I A D + + S L L G++ S +E+
Sbjct: 63 ATFLDICKDEQNSPNPLTE-IIKALSGLDRNKTRAMPSRELAAILSHVGEQMSPEEIKYL 121
Query: 568 YDQMDID 588
+++++
Sbjct: 122 LSKVEVN 128
>Z82256-6|CAB05117.2| 616|Caenorhabditis elegans Hypothetical
protein B0513.5 protein.
Length = 616
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 481 EEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYID 606
+EG++ S+ L G K + V + +D++D D G +D
Sbjct: 283 QEGRLTSQEFYKRLGELGVKTDTESVKKFFDEVDFDSDGIVD 324
>AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical
protein Y71A12B.15 protein.
Length = 758
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 490 KIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKL 618
K +S L A++T+GD F+ VD +DID ++ T KL
Sbjct: 34 KFNSVELTSAMLTYGDLFNVTIVDLRSISIDIDLVKFLYTQKL 76
>Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical
protein T15D6.4 protein.
Length = 424
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 388 NFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALM 525
NF +++ ANRM G ++ +V+ F+T + E ++ + L L+
Sbjct: 171 NFAKMVKPVANRMIDGMNKQVLVVRRFETNETELPLNLDELEQGLL 216
>Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical
protein C07A9.5 protein.
Length = 358
Score = 28.7 bits (61), Expect = 3.6
Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
Frame = +1
Query: 223 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG-RLASEKELDEMVG--EASGPINF 393
++KQ+ EFK AF D +K+G + S G + E L E + + S
Sbjct: 227 TEKQLHEFKLAFDYFDQEKNGWLDYEHFELCLKSQGYNFSVESTLKETMSLLDPSTYEKH 286
Query: 394 TQLLTLFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYD 573
+ + + + D+ + +A K D KI R + K A + + + D
Sbjct: 287 DYMRYMVKHETTNILDDHSAIEDALKNLDAR-KISDSMSRKEAEFFMSKI-AKKAETSSD 344
Query: 574 QMDIDDKGYIDT 609
Q+ ++ K ++++
Sbjct: 345 QVCLEYKDFVNS 356
>U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 1 protein.
Length = 191
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 253 AFQLMDHDKDGIIGKNDLRATFDSLGRL-ASEKELDE 360
AF+L D D+DG I +N++ + DS+ ++ S +L E
Sbjct: 104 AFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPE 140
>L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 191
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 253 AFQLMDHDKDGIIGKNDLRATFDSLGRL-ASEKELDE 360
AF+L D D+DG I +N++ + DS+ ++ S +L E
Sbjct: 104 AFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPE 140
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +1
Query: 409 LFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYD 573
+ N M D DDVV N + D+ GKID ++ AD DE +
Sbjct: 710 MLENEMDEEDDGDDVVENDAEKIDKSGKIDKIDSDDDEEADDEELEADVTDEVVE 764
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 163 QSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGI-IGKNDLRATFDSLGRLA 339
+ + S+ AKR+ N+FS+ V E + + M+ DKD + ++ D RL
Sbjct: 128 EDAEWSKNAKRSILNLFSLRKSAPVDEMNQDQKDMESDKDSVFFNVHEKTMEGDCRSRLH 187
Query: 340 SEKELDEMVGEASGPINFTQLLT 408
+E ++ + S +NF + +T
Sbjct: 188 IVQEGEKTIYTKS--VNFDKCIT 208
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 319 DSLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE 486
D LG+ A+ ++ VG+ + FT L LF ++ E D+ + ++ +E+
Sbjct: 186 DELGKFATMFSSNQEVGDHVRKMKFTLLNPLFVQKLFSNIKEGDIPVLMVRSGEEK 241
>AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical
protein C24F3.4 protein.
Length = 703
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 520 LMTWGDKFSADEVDE 564
L WGDK+S DE++E
Sbjct: 625 LQLWGDKYSIDEIEE 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.133 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,133,604
Number of Sequences: 27780
Number of extensions: 173057
Number of successful extensions: 563
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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