Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k15r
         (413 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.68 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.6  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    22   2.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   4.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   4.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    20   8.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 0.68
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 247 IFLTAVIQFGYCCLVGTFPFNSFLS 173
           +F+T  + F YC ++    FN++ S
Sbjct: 497 VFVTTYLMFDYCTVLRVQRFNNYQS 521



 Score = 20.6 bits (41), Expect = 6.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 53   ICTSGVAYCCYQCH 12
            IC + V Y C+ C+
Sbjct: 1004 ICAADVFYICHVCY 1017


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 285 RSFRCVFLIQFW 320
           R+FRCVF++  W
Sbjct: 43  RTFRCVFVLDPW 54


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
 Frame = -1

Query: 92  PRAECRTWLXRFHI--CTSGVAYCCYQCHR 9
           P+A  R WL + HI   T    + C  C+R
Sbjct: 14  PKAFSRPWLLQGHIRTHTGEKPFSCTYCNR 43


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 244 KYTKRYASIILSFLGVFVVY 303
           K TKRY     +F GV + Y
Sbjct: 108 KKTKRYCYYYYAFFGVHLAY 127


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 3   FYPMTLITTICN 38
           FY MTL+  ICN
Sbjct: 320 FYCMTLLYIICN 331


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 407 YYYSLN*LTCIIYYCK 360
           +Y +L  L CI Y+C+
Sbjct: 288 FYCALIILLCIYYFCR 303


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 3   FYPMTLITTICN 38
           FY MTL+  ICN
Sbjct: 320 FYCMTLLYIICN 331


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -1

Query: 344 MSSLTAVIPKLYQEYTTKTPKKLKIIDAYL 255
           ++ L  +IPK Y   TT   +  K+++  L
Sbjct: 49  LALLQEIIPKSYFGTTTNLKRFYKVVEKIL 78


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 53  ICTSGVAYCCYQCH 12
           IC + V Y C+ C+
Sbjct: 285 ICAADVFYICHVCY 298


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 185 FFLKWFYIYSKLLCSW 138
           F L  +YIYSK    W
Sbjct: 9   FLLLLYYIYSKHYSYW 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,950
Number of Sequences: 336
Number of extensions: 1985
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)