Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k15r
         (413 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113429-1|AAM29434.1|  112|Drosophila melanogaster RE23864p pro...   124   6e-29
AE014134-1484|AAF52660.1|  112|Drosophila melanogaster CG13393-P...   124   6e-29
BT011031-1|AAR30191.1|  703|Drosophila melanogaster RE45108p pro...    28   4.3  
AE014296-927|AAF50798.1|  703|Drosophila melanogaster CG4611-PA ...    28   4.3  
BT021292-1|AAX33440.1|  416|Drosophila melanogaster RE27549p pro...    28   5.6  
AE013599-3395|AAF46845.1|  416|Drosophila melanogaster CG5821-PA...    28   5.6  

>AY113429-1|AAM29434.1|  112|Drosophila melanogaster RE23864p
           protein.
          Length = 112

 Score =  124 bits (298), Expect = 6e-29
 Identities = 60/92 (65%), Positives = 70/92 (76%)
 Frame = -2

Query: 322 FQNCIKNTQRKLLRSLK*LMHTFXYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFV 143
           + + ++NT +KL    K +     YI LT +IQF YCCLVGTFPFNSFLSGFISTVSCFV
Sbjct: 12  YNDYVQNTPKKL----KLVDIYLGYILLTGIIQFVYCCLVGTFPFNSFLSGFISTVSCFV 67

Query: 142 LGVCLRLQVNPENKNEFQGLSAERGXADFIFA 47
           L VCLRLQ NP+NK+ F G+S ERG ADFIFA
Sbjct: 68  LAVCLRLQANPQNKSVFAGISPERGFADFIFA 99



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 344 MSSLTAVIPKLYQEYTTKTPKKLKIIDAYL 255
           M  L++VI K Y +Y   TPKKLK++D YL
Sbjct: 1   MVELSSVISKFYNDYVQNTPKKLKLVDIYL 30


>AE014134-1484|AAF52660.1|  112|Drosophila melanogaster CG13393-PA
           protein.
          Length = 112

 Score =  124 bits (298), Expect = 6e-29
 Identities = 60/92 (65%), Positives = 70/92 (76%)
 Frame = -2

Query: 322 FQNCIKNTQRKLLRSLK*LMHTFXYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFV 143
           + + ++NT +KL    K +     YI LT +IQF YCCLVGTFPFNSFLSGFISTVSCFV
Sbjct: 12  YNDYVQNTPKKL----KLVDIYLGYILLTGIIQFVYCCLVGTFPFNSFLSGFISTVSCFV 67

Query: 142 LGVCLRLQVNPENKNEFQGLSAERGXADFIFA 47
           L VCLRLQ NP+NK+ F G+S ERG ADFIFA
Sbjct: 68  LAVCLRLQANPQNKSVFAGISPERGFADFIFA 99



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 344 MSSLTAVIPKLYQEYTTKTPKKLKIIDAYL 255
           M  L++VI K Y +Y   TPKKLK++D YL
Sbjct: 1   MVELSSVISKFYNDYVQNTPKKLKLVDIYL 30


>BT011031-1|AAR30191.1|  703|Drosophila melanogaster RE45108p
           protein.
          Length = 703

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = +3

Query: 102 LFSGLTCSRRHTPRTKQLTVDIKPLKKELNGKVPTRQQ*PNCMTAVRKIYXKVCINYFKL 281
           L  GLT    H  +   +T DI+     L    PT       +T VRKI  K  I++F +
Sbjct: 432 LLGGLTGFLEHM-KQHNITPDIETFTAMLEVIPPTNAAEKQLLTFVRKIGLKADIDFFNI 490

Query: 282 L 284
           L
Sbjct: 491 L 491


>AE014296-927|AAF50798.1|  703|Drosophila melanogaster CG4611-PA
           protein.
          Length = 703

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = +3

Query: 102 LFSGLTCSRRHTPRTKQLTVDIKPLKKELNGKVPTRQQ*PNCMTAVRKIYXKVCINYFKL 281
           L  GLT    H  +   +T DI+     L    PT       +T VRKI  K  I++F +
Sbjct: 432 LLGGLTGFLEHM-KQHNITPDIETFTAMLEVIPPTNAAEKQLLTFVRKIGLKADIDFFNI 490

Query: 282 L 284
           L
Sbjct: 491 L 491


>BT021292-1|AAX33440.1|  416|Drosophila melanogaster RE27549p
           protein.
          Length = 416

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +3

Query: 48  ANMKSAKPRSALSPWNSFLFSGLTCSRRHTPRTKQLTVDIKPLKKELNGKVPTRQQ 215
           A+ + A+P  A+  +   L +  +    H P   +L +D    + +LNG++PTR Q
Sbjct: 62  ADGEKAQPAPAVQKYMQELMTERSRMENHFPLAVKL-IDEALERVQLNGRIPTRDQ 116


>AE013599-3395|AAF46845.1|  416|Drosophila melanogaster CG5821-PA
           protein.
          Length = 416

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +3

Query: 48  ANMKSAKPRSALSPWNSFLFSGLTCSRRHTPRTKQLTVDIKPLKKELNGKVPTRQQ 215
           A+ + A+P  A+  +   L +  +    H P   +L +D    + +LNG++PTR Q
Sbjct: 62  ADGEKAQPAPAVQKYMQELMTERSRMENHFPLAVKL-IDEALERVQLNGRIPTRDQ 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,627,502
Number of Sequences: 53049
Number of extensions: 319296
Number of successful extensions: 713
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)