Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k15r
(413 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89080-1|CAA61451.1| 113|Caenorhabditis elegans dad-1 protein. 103 5e-23
AF039713-4|AAB96727.1| 113|Caenorhabditis elegans Dad (defender... 103 5e-23
Z81124-10|CAH60752.1| 241|Caenorhabditis elegans Hypothetical p... 30 0.76
U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z66562-4|CAA91465.1| 258|Caenorhabditis elegans Hypothetical pr... 27 4.1
AC025715-3|AAU87815.1| 534|Caenorhabditis elegans Hypothetical ... 27 4.1
U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide tr... 27 5.4
AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity ... 27 5.4
AC199171-2|ABO33268.1| 297|Caenorhabditis elegans Hypothetical ... 27 5.4
U70851-3|AAB09129.1| 293|Caenorhabditis elegans Hypothetical pr... 27 7.1
U41279-3|AAK31422.1| 210|Caenorhabditis elegans Helix loop heli... 27 7.1
AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical ... 27 7.1
AC024826-11|AAF60802.1| 246|Caenorhabditis elegans Hypothetical... 27 7.1
Z71178-4|CAA94877.1| 390|Caenorhabditis elegans Hypothetical pr... 26 9.4
AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine re... 26 9.4
>X89080-1|CAA61451.1| 113|Caenorhabditis elegans dad-1 protein.
Length = 113
Score = 103 bits (247), Expect = 5e-23
Identities = 50/84 (59%), Positives = 58/84 (69%)
Frame = -2
Query: 298 QRKLLRSLK*LMHTFXYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFVLGVCLRLQ 119
Q+ LK + YI T + QF YC LVGTFPFNSFLSGFISTV+ FVL CLR+Q
Sbjct: 17 QKTTSSKLKIIDAYMTYILFTGIFQFIYCLLVGTFPFNSFLSGFISTVTSFVLASCLRMQ 76
Query: 118 VNPENKNEFQGLSAERGXADFIFA 47
VN EN++EF +S ER ADFIFA
Sbjct: 77 VNQENRSEFTAVSTERAFADFIFA 100
Score = 32.3 bits (70), Expect = 0.14
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 341 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLXVYFPYCG 231
+ + V+ KL+ +Y T KLKIIDAY+ Y + G
Sbjct: 3 AQVVPVLSKLFDDYQKTTSSKLKIIDAYM-TYILFTG 38
>AF039713-4|AAB96727.1| 113|Caenorhabditis elegans Dad (defender
against apoptoticdeath) homolog protein 1 protein.
Length = 113
Score = 103 bits (247), Expect = 5e-23
Identities = 50/84 (59%), Positives = 58/84 (69%)
Frame = -2
Query: 298 QRKLLRSLK*LMHTFXYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFVLGVCLRLQ 119
Q+ LK + YI T + QF YC LVGTFPFNSFLSGFISTV+ FVL CLR+Q
Sbjct: 17 QKTTSSKLKIIDAYMTYILFTGIFQFIYCLLVGTFPFNSFLSGFISTVTSFVLASCLRMQ 76
Query: 118 VNPENKNEFQGLSAERGXADFIFA 47
VN EN++EF +S ER ADFIFA
Sbjct: 77 VNQENRSEFTAVSTERAFADFIFA 100
Score = 32.3 bits (70), Expect = 0.14
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 341 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLXVYFPYCG 231
+ + V+ KL+ +Y T KLKIIDAY+ Y + G
Sbjct: 3 AQVVPVLSKLFDDYQKTTSSKLKIIDAYM-TYILFTG 38
>Z81124-10|CAH60752.1| 241|Caenorhabditis elegans Hypothetical
protein T21B4.15 protein.
Length = 241
Score = 29.9 bits (64), Expect = 0.76
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 353 KITMSSLTAVIPKLYQEYTTKTPKKLKIIDAYLXVYFP 240
K S T +PKL + T+K PKK + Y ++ P
Sbjct: 202 KTVKSPTTPTVPKLVSKVTSKKPKKAPLFAKYTKMFDP 239
>U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical
protein D2096.5 protein.
Length = 137
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 268 LMHTFXYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFV 143
L+ F ++ ++ ++ LV TF FN FLS +STV FV
Sbjct: 8 LLSVFIFLLFSSEVE----ALVTTFHFNGFLSCGLSTVDFFV 45
>Z66562-4|CAA91465.1| 258|Caenorhabditis elegans Hypothetical
protein F42E11.3 protein.
Length = 258
Score = 27.5 bits (58), Expect = 4.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -2
Query: 262 HTFXYIFLTAVIQFGYCCLVGTFPF--NSFLSGFIST---VSCFVLGVCLRL 122
HTF IF+ +I FG ++ F F NS ST + FV+ +C RL
Sbjct: 57 HTFKAIFIIQMITFGAALVIQKFSFMVNSVEYVTYSTFPFIPKFVISICDRL 108
>AC025715-3|AAU87815.1| 534|Caenorhabditis elegans Hypothetical
protein Y38F2AR.5 protein.
Length = 534
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 33 CNTRCANMKSAKPRSALSPWNSFLFSGLTCSRRHTPRTKQLTVDIKPLKK 182
C+T C + + +S WN+F L S + L V+ P+KK
Sbjct: 304 CSTDCKRIVEQRVKSVHKDWNNFSRLSLADSDIVRTSSNPLKVEYPPIKK 353
>U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide
transporter protein 2 protein.
Length = 835
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 202 GTFPFNSFLSGFISTVSCFVLGVCLRLQVNPENKN 98
G+ P +L +++T C + CL LQ NKN
Sbjct: 271 GSTPKEHWLLHYLTTHDCALDAKCLELQAEKRNKN 305
>AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity
peptide transporter protein.
Length = 796
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 202 GTFPFNSFLSGFISTVSCFVLGVCLRLQVNPENKN 98
G+ P +L +++T C + CL LQ NKN
Sbjct: 232 GSTPKEHWLLHYLTTHDCALDAKCLELQAEKRNKN 266
>AC199171-2|ABO33268.1| 297|Caenorhabditis elegans Hypothetical
protein VY35H6BL.1 protein.
Length = 297
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 33 CNTRCANMKSAKPRSALSPWNSFLFSGLTCSRRHTPRTKQ-LTVDIKPLKK 182
C+T C + + +S WN+ FS L+ + RT L V+ P+KK
Sbjct: 91 CSTDCKRIVEQRVKSVHKDWNN--FSRLSLADSDIVRTSNPLKVEYPPIKK 139
>U70851-3|AAB09129.1| 293|Caenorhabditis elegans Hypothetical
protein M02B7.4 protein.
Length = 293
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 256 FXYIFLTAVIQFGYCCLVGTFPF 188
F + F+TAVI FG CL F
Sbjct: 3 FLFFFVTAVILFGVLCLTAFMAF 25
>U41279-3|AAK31422.1| 210|Caenorhabditis elegans Helix loop helix
protein 26 protein.
Length = 210
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 233 GHTIRLLLPCRHFPI*FFLKWFYIYSKLL 147
G +I +PC FPI FL F +YS L+
Sbjct: 137 GKSITCTVPCLPFPILPFLPVFPVYSPLV 165
>AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical
protein ZC190.8 protein.
Length = 227
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 232 VIQFGYCCLVGTFPFNSFLSGFISTVSCFVLGVCLRLQVNPENK 101
+IQ ++G F F + FI ++ F+LG CL ++ P +K
Sbjct: 12 LIQKSEYFIIGVFLI--FRTAFIFIITGFILGYCLHVKDPPSDK 53
>AC024826-11|AAF60802.1| 246|Caenorhabditis elegans Hypothetical
protein Y55F3AM.10 protein.
Length = 246
Score = 26.6 bits (56), Expect = 7.1
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +3
Query: 6 YPMTLITTICNTRCANMKS-AKPRSALSPWNSFLFSGLTCSRRHTPRTKQLTVDIKPLKK 182
Y + L+T+ + C + + + +SP + + + + R T ++K L +
Sbjct: 150 YVLPLMTSTRHLSCVVLVAPSNTHEVVSPSSYTVPTLVVWGERDTSLGPTAAANLKNLPQ 209
Query: 183 ELNGKVPTRQQ*PNCMTAVRKIYXKVCINYFKLLRSF 293
K+P C K + +C+N+F L+RS+
Sbjct: 210 VKLQKIPDAGH--ACYLHNPKCFENLCVNFFDLIRSY 244
>Z71178-4|CAA94877.1| 390|Caenorhabditis elegans Hypothetical
protein B0024.4 protein.
Length = 390
Score = 26.2 bits (55), Expect = 9.4
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -1
Query: 356 NKITMSSLTAVIPKLYQEYTTKTPKKLKIIDAYLXVYFPYCGHTIRLLLPCR-HFPI*FF 180
N+ T S +T LY + T +K+ I + G + +P +F + +
Sbjct: 242 NRPTTSKITT---GLYMKPITVNDRKVSIFTGHDDKLNGTIGVNVVGSVPANANFSVTYP 298
Query: 179 LKWFYIYSKLLCSWSVP 129
+KW I + ++ SWS+P
Sbjct: 299 IKWVTIPTNIIQSWSIP 315
>AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 68 protein.
Length = 284
Score = 26.2 bits (55), Expect = 9.4
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Frame = -1
Query: 413 ENYYYSLN*LTCIIYYCKINKITMSSLTAVIPKLYQEYTTKTPKKLKIIDAYLXVY---- 246
+N+ + LT I + + + +++L VI + + KL + ++ ++
Sbjct: 78 KNFIFITLWLTIIFGIIRTSLLFLTTLDRVISLFFPFFYCANRSKLPLFAIFILIFSLII 137
Query: 245 ------FPYCGHTIRLLLPCRHF 195
F YCG+TI + C HF
Sbjct: 138 FDQIIMFGYCGNTIDTPMNCDHF 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,871,370
Number of Sequences: 27780
Number of extensions: 176906
Number of successful extensions: 483
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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