Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k15r
         (413 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g35520.1 68415.m04350 defender against cell death 2 (DAD2) id...    79   9e-16
At1g32210.1 68414.m03962 defender against cell death 1 (DAD1) id...    78   2e-15
At2g35520.2 68415.m04351 defender against cell death 2 (DAD2) id...    76   8e-15
At5g57130.1 68418.m07135 expressed protein                             31   0.41 
At4g26930.1 68417.m03875 myb family transcription factor (MYB97)...    27   6.6  
At1g19620.1 68414.m02445 expressed protein                             27   6.6  
At4g22890.3 68417.m03307 expressed protein                             26   8.7  
At4g22890.2 68417.m03306 expressed protein                             26   8.7  
At4g22890.1 68417.m03305 expressed protein                             26   8.7  

>At2g35520.1 68415.m04350 defender against cell death 2 (DAD2)
           identical to defender against cell death 2 (DAD-2,
           AtDAD2) [Arabidopsis thaliana] SWISS-PROT:O22622
          Length = 115

 Score = 79.4 bits (187), Expect = 9e-16
 Identities = 38/66 (57%), Positives = 47/66 (71%)
 Frame = -2

Query: 250 YIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFVLGVCLRLQVNPENKNEFQGLSAER 71
           +   TA+IQ  Y  LVG+FPFNSFLSG +S +   VL VCLR+QVN ENK EF+ L+ ER
Sbjct: 36  FAVFTALIQVAYMALVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKENK-EFKDLAPER 94

Query: 70  GXADFI 53
             ADF+
Sbjct: 95  AFADFV 100


>At1g32210.1 68414.m03962 defender against cell death 1 (DAD1)
           identical to defender against cell death 1 (DAD-1,
           AtDAD1) [Arabidopsis thaliana] SWISS-PROT:Q39080
          Length = 115

 Score = 78.2 bits (184), Expect = 2e-15
 Identities = 38/66 (57%), Positives = 47/66 (71%)
 Frame = -2

Query: 250 YIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFVLGVCLRLQVNPENKNEFQGLSAER 71
           +   TA+IQ  Y  LVG+FPFNSFLSG +S +   VL VCLR+QVN ENK EF+ L+ ER
Sbjct: 36  FAVFTALIQVVYMALVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKENK-EFKDLAPER 94

Query: 70  GXADFI 53
             ADF+
Sbjct: 95  AFADFV 100


>At2g35520.2 68415.m04351 defender against cell death 2 (DAD2)
           identical to defender against cell death 2 (DAD-2,
           AtDAD2) [Arabidopsis thaliana] SWISS-PROT:O22622
          Length = 116

 Score = 76.2 bits (179), Expect = 8e-15
 Identities = 36/65 (55%), Positives = 45/65 (69%)
 Frame = -2

Query: 247 IFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSCFVLGVCLRLQVNPENKNEFQGLSAERG 68
           +F   + Q  Y  LVG+FPFNSFLSG +S +   VL VCLR+QVN ENK EF+ L+ ER 
Sbjct: 38  VFTALIQQVAYMALVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKENK-EFKDLAPERA 96

Query: 67  XADFI 53
            ADF+
Sbjct: 97  FADFV 101


>At5g57130.1 68418.m07135 expressed protein
          Length = 920

 Score = 30.7 bits (66), Expect = 0.41
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +3

Query: 57  KSAKPRSALSPWNSFLFSGLTCSRRHTPRTKQLTVDIKPLKKELNGKV 200
           K  KP S LS  N F      CSR+ +  +  L ++IK   +E+ G++
Sbjct: 731 KKRKPESDLSIENGFWMKKEVCSRQSSFNSSYLDLNIKAEDEEVEGEI 778


>At4g26930.1 68417.m03875 myb family transcription factor (MYB97)
           contains Pfam profile: PF00249 myb-like DNA-binding
           domain ;similar to anther-specific myb-related protein 2
           GI:11066263 from [Nicotiana tabacum]
          Length = 389

 Score = 26.6 bits (56), Expect = 6.6
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 6   YPMTLITTICNTRCANMKSAKPRSALSPWNSFLFSGLTCSRRHTPRTK-QLTVDIKPLKK 182
           +P+    ++C  RC N   +   S +S   +FL S  T    H+  +  Q T  +  +K 
Sbjct: 163 FPLLQPPSLCPKRCYNTAFSPKASYISSPTNFLVSSPTFLHTHSSLSSYQSTNPVYSMKH 222

Query: 183 ELN 191
           EL+
Sbjct: 223 ELS 225


>At1g19620.1 68414.m02445 expressed protein
          Length = 317

 Score = 26.6 bits (56), Expect = 6.6
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 241 LTAVIQFGYCCL 206
           L+AV+ FGYCCL
Sbjct: 25  LSAVVAFGYCCL 36


>At4g22890.3 68417.m03307 expressed protein
          Length = 324

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 219 PNCMTAVRKIYXKVCINYFKLL 284
           P C    +K+Y  + ++YFK+L
Sbjct: 181 PRCSLRSKKVYSDLAVDYFKML 202


>At4g22890.2 68417.m03306 expressed protein
          Length = 324

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 219 PNCMTAVRKIYXKVCINYFKLL 284
           P C    +K+Y  + ++YFK+L
Sbjct: 181 PRCSLRSKKVYSDLAVDYFKML 202


>At4g22890.1 68417.m03305 expressed protein
          Length = 324

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 219 PNCMTAVRKIYXKVCINYFKLL 284
           P C    +K+Y  + ++YFK+L
Sbjct: 181 PRCSLRSKKVYSDLAVDYFKML 202


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,066,624
Number of Sequences: 28952
Number of extensions: 153229
Number of successful extensions: 363
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 625471056
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)