Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k10r
         (501 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0G452 Cluster: Filamentous haemagglutinin family outer...    33   2.7  
UniRef50_Q689Z6 Cluster: Asparagine-rich cocoon silk protein; n=...    33   2.7  
UniRef50_A0Z076 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_A6BYX8 Cluster: Putative inner membrane protein; n=1; P...    33   4.8  
UniRef50_Q18211 Cluster: Regulator of chromosome condensation; n...    33   4.8  
UniRef50_UPI0000DD7C34 Cluster: PREDICTED: similar to Hornerin; ...    32   8.3  
UniRef50_Q20576 Cluster: Putative uncharacterized protein pqn-39...    32   8.3  

>UniRef50_A0G452 Cluster: Filamentous haemagglutinin family outer
            membrane protein; n=1; Burkholderia phymatum STM815|Rep:
            Filamentous haemagglutinin family outer membrane protein
            - Burkholderia phymatum STM815
          Length = 2782

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +1

Query: 133  DRDNGALFSLFGDNNGVGLDFSGSIRNTSGNVD-VHDXLHKRRG-TGGNSRSNDNRSGLH 306
            D  NG + +L G N  V +  +G++ NTSG +   H+      G TGG + S  N   ++
Sbjct: 883  DNSNGQIGNLTGSNGDVTIAATGALTNTSGQIGATHNLSVNAAGLTGGGAYSAANDVAIN 942

Query: 307  GSSHYTTVSD 336
               ++    D
Sbjct: 943  VQGNFAPTPD 952


>UniRef50_Q689Z6 Cluster: Asparagine-rich cocoon silk protein; n=1;
           Cotesia glomerata|Rep: Asparagine-rich cocoon silk
           protein - Cotesia glomerata
          Length = 255

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
 Frame = +1

Query: 172 NNGVGLD-FSGSIRNTSGNVDVHDXLHKRRGTGGNSRSNDN-RSGLHGSSHYTTVSDRXX 345
           N+G   + +S S  N++ N D +   +   G  GNS SN N  S  +  ++  + S+   
Sbjct: 85  NSGANANSYSNSNSNSNANSDANSNSYSNSGANGNSNSNSNSNSNANSDANSNSYSNSGS 144

Query: 346 XXXXXXXXXXXXXXECRSNGNRFKDTG 426
                            +N N + ++G
Sbjct: 145 NADSNANSDSNSNANSDANSNSYSNSG 171


>UniRef50_A0Z076 Cluster: Putative uncharacterized protein; n=1;
           Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
           protein - Lyngbya sp. PCC 8106
          Length = 981

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 16/55 (29%), Positives = 32/55 (58%)
 Frame = +1

Query: 157 SLFGDNNGVGLDFSGSIRNTSGNVDVHDXLHKRRGTGGNSRSNDNRSGLHGSSHY 321
           S  G N+G G  F  +  N+ GN+D  +  ++  GTG ++  +DN++  +G++ +
Sbjct: 289 SFGGGNSGGGGGFGSNTPNSGGNIDTGEN-NENLGTGNSAFGSDNQTEGNGNNAF 342


>UniRef50_A6BYX8 Cluster: Putative inner membrane protein; n=1;
            Planctomyces maris DSM 8797|Rep: Putative inner membrane
            protein - Planctomyces maris DSM 8797
          Length = 5594

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 16/56 (28%), Positives = 30/56 (53%)
 Frame = +1

Query: 169  DNNGVGLDFSGSIRNTSGNVDVHDXLHKRRGTGGNSRSNDNRSGLHGSSHYTTVSD 336
            D    G + S  +  +SGN  VHD    +  + G+ +S D+R+ ++GS   T +++
Sbjct: 4038 DRYSAGAETSNEL-TSSGNSHVHDEYRTQNVSSGSHQSVDSRTPVNGSKSVTVIAN 4092


>UniRef50_Q18211 Cluster: Regulator of chromosome condensation; n=2;
           Caenorhabditis|Rep: Regulator of chromosome condensation
           - Caenorhabditis elegans
          Length = 569

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = +1

Query: 199 GSIRNTSGNVDVHDXLHK 252
           G++RN++GNVDVH  LHK
Sbjct: 269 GNLRNSNGNVDVHPLLHK 286


>UniRef50_UPI0000DD7C34 Cluster: PREDICTED: similar to Hornerin;
           n=2; Homo sapiens|Rep: PREDICTED: similar to Hornerin -
           Homo sapiens
          Length = 962

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +1

Query: 142 NGALFSLFGDNNGVGLDFSGSIRNTSGNVDVHDXLHKRRGTGGNSRSNDNRSGLHGSSHY 321
           N  L +  G +   GL  + S  +T+     +  LH   G   NSR + N SG H +  +
Sbjct: 553 NSRLHTNSGFHTNTGLHTNNSGFHTNSEFHTNSGLHTNSGFHTNSRFHTNNSGFHTNLGF 612

Query: 322 TTVSD 336
            T S+
Sbjct: 613 HTNSE 617


>UniRef50_Q20576 Cluster: Putative uncharacterized protein pqn-39;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein pqn-39 - Caenorhabditis elegans
          Length = 925

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 142 NGALFSLFGDNNGVGLDFSGSIRNTSGNVDVHDXLHKRRGTGGNSRSNDNRSGLHGSSH 318
           N +  +L   +NG   + SGS+RN   N +  +   K RG  GN++   N +  H  +H
Sbjct: 535 NSSTSALTPRSNGQKKETSGSVRNEGSNNNSQNRNTKYRGAVGNNQHMYNGNEGHSGAH 593


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,841,037
Number of Sequences: 1657284
Number of extensions: 3061777
Number of successful extensions: 12123
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11951
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)