Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k10f
         (455 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.          30   3.3  
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.         30   3.3  
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.          30   3.3  
AK125767-1|BAC86280.1|  168|Homo sapiens protein ( Homo sapiens ...    29   5.7  

>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 17/93 (18%), Positives = 31/93 (33%)
 Frame = -3

Query: 303  GSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSDRXXXXXXXXXXXXX 124
            G+I   +G+   H +    + T   SR+   +   H  S  + V                
Sbjct: 2145 GTIHGQTGDTTRHGQSGHGQSTQTGSRTTGRQRSSHSESSDSEVHSEASPTHSGHTHSQA 2204

Query: 123  XXDECRSNGNRFKDTGRSHGDQGEGNEEFHFGF 25
                 +S  +     G +HG  G+     H+G+
Sbjct: 2205 GSRHGQSGSSGHGRQGTTHGQTGDTTRHAHYGY 2237


>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 17/93 (18%), Positives = 31/93 (33%)
 Frame = -3

Query: 303  GSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSDRXXXXXXXXXXXXX 124
            G+I   +G+   H +    + T   SR+   +   H  S  + V                
Sbjct: 2145 GTIHGQTGDTTRHGQSGHGQSTQTGSRTTGRQRSSHSESSDSEVHSEASPTHSGHTHSQA 2204

Query: 123  XXDECRSNGNRFKDTGRSHGDQGEGNEEFHFGF 25
                 +S  +     G +HG  G+     H+G+
Sbjct: 2205 GSRHGQSGSSGHGRQGTTHGQTGDTTRHAHYGY 2237


>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 17/93 (18%), Positives = 31/93 (33%)
 Frame = -3

Query: 303  GSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSDRXXXXXXXXXXXXX 124
            G+I   +G+   H +    + T   SR+   +   H  S  + V                
Sbjct: 2145 GTIHGQTGDTTRHGQSGHGQSTQTGSRTTGRQRSSHSESSDSEVHSEASPTHSGHTHSQA 2204

Query: 123  XXDECRSNGNRFKDTGRSHGDQGEGNEEFHFGF 25
                 +S  +     G +HG  G+     H+G+
Sbjct: 2205 GSRHGQSGSSGHGRQGTTHGQTGDTTRHAHYGY 2237


>AK125767-1|BAC86280.1|  168|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43779 fis, clone TESTI2051488. ).
          Length = 168

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 282 GNVDVHDELHKRRGTGGNSRSNDNRSGLHGS 190
           GN   H   H  R  GG+SRS +  S LH S
Sbjct: 73  GNSPSHSHSHTSRRCGGSSRSRECCSSLHSS 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,501,811
Number of Sequences: 237096
Number of extensions: 441959
Number of successful extensions: 1103
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)