Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k09r
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543... 163 1e-40
03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,795... 161 4e-40
01_06_1250 + 35726115-35726255,35727435-35727479,35728570-357286... 148 4e-36
03_06_0155 - 32031370-32031707,32033066-32033279 33 0.31
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 33 0.31
04_04_1224 + 31858110-31858338,31859180-31859301,31859398-318595... 30 1.7
01_05_0335 + 21074117-21074241,21074299-21074929,21075359-210753... 30 1.7
11_06_0025 - 19341127-19341339,19341426-19341620,19341912-193420... 29 2.9
07_03_1745 - 29176951-29178901,29178960-29179069,29179536-29179547 29 3.9
05_07_0219 - 28474661-28475146,28475979-28476644 29 3.9
06_03_0452 + 20931484-20933872,20933950-20934074 29 5.1
09_01_0150 - 2244757-2245303,2252925-2253277 28 6.7
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 28 6.7
02_04_0270 - 21439788-21441680 28 6.7
12_02_0682 - 21923334-21923626,21923684-21923733,21923982-219240... 28 8.9
08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058... 28 8.9
04_01_0022 + 324422-324445,324870-325265,325366-325546,325781-32... 28 8.9
03_01_0296 + 2284385-2285629,2287632-2288594 28 8.9
03_01_0084 + 676538-676669,677828-677959,678085-678210,678820-67... 28 8.9
>10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,
5433773-5433880,5434900-5435073,5435366-5435503,
5435879-5435986,5436131-5436238,5436340-5436488,
5437594-5437747,5437980-5438140,5438221-5438427,
5438575-5438758,5438846-5438929,5439023-5439222,
5439314-5439373,5439461-5439665
Length = 783
Score = 163 bits (396), Expect = 1e-40
Identities = 90/204 (44%), Positives = 121/204 (59%)
Frame = -2
Query: 722 MFDAQSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPKPEHSNGSVNQGIELQEQTDL 543
+F Q +Q V + +AL+ +P ML+ KP +L K +H Q + + TD
Sbjct: 593 LFPGQKLVQLVLLLLALVSVPWMLIPKPFFL--------KKQHEQRHQGQQYTMLQATD- 643
Query: 542 GDVQPKPEAKSSGGHDHEDEPFSEIMIHQAIHTIEYVLSTISHTASYLRLWALSLAHAEL 363
+ + E H HE+ FSE+ +HQ IHTIE+VL +S+TASYLRLWALSLAH+EL
Sbjct: 644 -ESVTELEEHQDDPHHHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSEL 702
Query: 362 SEVLWNMVLTFGLKDHNYVGAIKLYVAFCFWALFTLAILVMMEGLSAFLHTLRLHWVEFM 183
S V + VL +N I V F F T+ +L++ME LSAFLH LRLHWVEF
Sbjct: 703 STVFYEKVLVLSWGYNNIFILIIGAVIFLF---ATIGVLLVMETLSAFLHALRLHWVEFQ 759
Query: 182 SKFYAGLGYIFQPFCFKTILEQEE 111
+KFY G GY F PF F +I+E+E+
Sbjct: 760 NKFYEGDGYKFVPFAFASIIEEED 783
>03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,
7952823-7952930,7953256-7953363,7953635-7953808,
7954054-7954191,7954643-7954750,7954866-7954973,
7955086-7955234,7955816-7955969,7956143-7956303,
7956391-7956597,7956703-7956886,7956974-7957057,
7957146-7957345,7957476-7957535,7957631-7957835
Length = 820
Score = 161 bits (392), Expect = 4e-40
Identities = 88/204 (43%), Positives = 119/204 (58%)
Frame = -2
Query: 722 MFDAQSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPKPEHSNGSVNQGIELQEQTDL 543
+F Q +Q V + +AL+ +P ML+ KP +L K EH Q + + TD
Sbjct: 630 LFPGQKTVQLVLLLLALVSVPWMLIPKPFFL--------KMEHERRHQGQQYAMLQSTD- 680
Query: 542 GDVQPKPEAKSSGGHDHEDEPFSEIMIHQAIHTIEYVLSTISHTASYLRLWALSLAHAEL 363
D +G + HE+ FSE+ +HQ IHTIE+VL +S+TASYLRLWALSLAH+EL
Sbjct: 681 -DSVVAEMGHHNGSNHHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSEL 739
Query: 362 SEVLWNMVLTFGLKDHNYVGAIKLYVAFCFWALFTLAILVMMEGLSAFLHTLRLHWVEFM 183
S V ++ VL +N + I + T+ +L++ME LSAFLH LRLHWVEF
Sbjct: 740 SSVFYDKVLLLAFGYNNILIRI---AGITIFICATVGVLLVMETLSAFLHALRLHWVEFQ 796
Query: 182 SKFYAGLGYIFQPFCFKTILEQEE 111
+KFY G GY F PF F I E+E+
Sbjct: 797 NKFYEGDGYKFAPFSFALISEEED 820
>01_06_1250 + 35726115-35726255,35727435-35727479,35728570-35728692,
35728804-35728911,35729247-35729360,35729440-35729613,
35729881-35729976,35730165-35730272,35730389-35730496,
35730595-35730743,35731255-35731408,35732487-35732647,
35733739-35733945,35733968-35734025,35734058-35734222,
35734305-35734388,35735670-35735863,35735952-35736011,
35736203-35736407
Length = 817
Score = 148 bits (359), Expect = 4e-36
Identities = 86/204 (42%), Positives = 119/204 (58%)
Frame = -2
Query: 722 MFDAQSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPKPEHSNGSVNQGIELQEQTDL 543
+F Q ++Q + + +A++ +P ML KP L K E G + + E
Sbjct: 629 LFWGQKELQILLLLMAIVAVPWMLFPKPFILKKLHK-----ERFQGHTYRFLGTSEM--- 680
Query: 542 GDVQPKPEAKSSGGHDHEDEPFSEIMIHQAIHTIEYVLSTISHTASYLRLWALSLAHAEL 363
D +P++ S H+D FSE+ +HQ IH+IE+VL +S+TASYLRLWALSLAH+EL
Sbjct: 681 -DPDSEPDSARSR---HDDFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSEL 736
Query: 362 SEVLWNMVLTFGLKDHNYVGAIKLYVAFCFWALFTLAILVMMEGLSAFLHTLRLHWVEFM 183
S V + +L N V +KL V ++ T IL+ ME LSAFLH LRLHWVEFM
Sbjct: 737 STVFYEKLLVLAWGYDNLV--VKL-VGLVIFSFATAFILLGMESLSAFLHALRLHWVEFM 793
Query: 182 SKFYAGLGYIFQPFCFKTILEQEE 111
+KFY G GY F+PF F + + E+
Sbjct: 794 NKFYHGDGYKFRPFSFALLADDED 817
>03_06_0155 - 32031370-32031707,32033066-32033279
Length = 183
Score = 32.7 bits (71), Expect = 0.31
Identities = 29/97 (29%), Positives = 40/97 (41%)
Frame = +1
Query: 352 STSDNSAWASDKAQSRR*EAV*EMVLSTYSMVWMAWWIMISLKGSSSWSCPPLDLASGLG 531
STS +S+W A A+ + L+ Y + +W G S+ +CP D
Sbjct: 5 STSSSSSWGPSPALVTAVVALLGLGLAAYIVGPQLYWHASEALGRSTGACPACD------ 58
Query: 532 CTSPRSVCSCSSMPWLTLPLECSGLGLFFLVASRYSG 642
C C + P L LP +CS F V SR SG
Sbjct: 59 -------CDCDARPLLALPEDCS--KQFKDVKSRASG 86
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 613 TTPSPNIPTAASTKASSCRSRPTSATCSPSP 521
T PSP+ T+ ST C S PT PSP
Sbjct: 130 TPPSPSSDTSPSTPGGGCSSSPTPCDAPPSP 160
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 607 PSPNIPTAASTKASSCRSRPTSATCSPSP 521
PSP+ T+ ST C S PT PSP
Sbjct: 468 PSPSSGTSPSTPGGGCSSSPTPCDAPPSP 496
>04_04_1224 +
31858110-31858338,31859180-31859301,31859398-31859507,
31859661-31859725,31859940-31860004,31860387-31860632,
31861212-31861313,31861484-31861534,31862015-31862105,
31862777-31862841
Length = 381
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 619 RRTTPSPNIPTAASTKASSCRSRPTSATCSPSPKL 515
+RT P P P+ + A++ RP+S++ SPSP L
Sbjct: 5 KRTKPPP--PSRKAETAAAAAQRPSSSSSSPSPSL 37
>01_05_0335 +
21074117-21074241,21074299-21074929,21075359-21075399,
21078458-21078560,21078755-21079601,21079938-21080689,
21080712-21080970,21081011-21081354
Length = 1033
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +3
Query: 135 ETEWLEDVAQTG--VEFAHEFNPVQTQSMQECGESLHHDEDGEREQRPETERHVQLDGAH 308
+ E +E+V + G ++ E N + +Q+CGE+ + GE + E E+ + G
Sbjct: 37 DDEGIEEVEEKGGGIQDCGEVNE-KGGGIQDCGEA--KENGGEIQDCGEVEKGGGICGGS 93
Query: 309 VVMVLQAERQHHVP*YFGQLSVGERQGPESEVGGCVRDGAEYVFDGVDG 455
++ E + + GQ G+ ES G C+ +G +FD DG
Sbjct: 94 NIVHSNDECKQPAQMWCGQRVRGKWFHRES--GRCLEEGKNVIFDTQDG 140
>11_06_0025 -
19341127-19341339,19341426-19341620,19341912-19342088,
19342505-19342672,19343533-19343574,19344129-19344214,
19345218-19345545
Length = 402
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -3
Query: 634 TCSPLRRTTPSPNIPTAASTKASSCRSRPTSATCSPSP 521
T +P + P P P+AAST SSC RPT A P P
Sbjct: 65 TAAPWPPSPPPPRTPSAAST--SSC--RPTVAPAVPLP 98
>07_03_1745 - 29176951-29178901,29178960-29179069,29179536-29179547
Length = 690
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 11 LVEQSNNTVLILNYVSIFFIMLHNICNI--FNH 103
L +Q NT ++ N V+++ IMLHN+C + F H
Sbjct: 557 LFDQMLNTKIVPN-VNVYNIMLHNLCKVGHFKH 588
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 625 PLRRTTPSPNIPTAASTKASSCRSRPTSATCSPSP 521
PL TTP P P+ A++ + + + T+ SP+P
Sbjct: 80 PLSATTPHPPPPSPATSSSRTATATATATPTSPTP 114
>06_03_0452 + 20931484-20933872,20933950-20934074
Length = 837
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 589 LECSGLGLFFLVASRYSG-FPSSMTGMQSSAMNTNTRWMSL*ASNM 723
L C+ L +L + +SG FP+ +T +Q +N + R S ASN+
Sbjct: 413 LRCNSLNYVWLSNNNFSGTFPAGLTEVQIQEVNLSGRLPSNWASNL 458
>09_01_0150 - 2244757-2245303,2252925-2253277
Length = 299
Score = 28.3 bits (60), Expect = 6.7
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = -2
Query: 413 TASYLRLWALSLAHAELSEVLWNMVLTFGLKDHNYVGAIKLYVAFCFWA-LFTLAILVMM 237
TA+Y L+A+ + A +L+ V T LK G + L +AF F+ + +A+LV M
Sbjct: 93 TAAY-SLFAVVIGFAIRIIILFGAVATTQLK-----GPL-LTLAFVFFLEIAYVALLVAM 145
Query: 236 EGLSAFLHTLRLHWVEFMSKFYAGLGYIF 150
GL AFL + + + + +G+IF
Sbjct: 146 AGLLAFLMVKKYYVPFLLLSLFVLVGFIF 174
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3
Query: 625 PLRRTTPSPNIPTAASTKASSCRSRPTSATCSPSP 521
P +TPS + A S++ SS P+ ++ +P+P
Sbjct: 10 PTPASTPSSRLAAAPSSRVSSAAPHPSPSSSAPTP 44
>02_04_0270 - 21439788-21441680
Length = 630
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 599 EHSNGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDE 483
+ S+G N I + D+GDV +PE ++ G D +
Sbjct: 257 DSSDGGWNDDIVTSDLEDMGDVDLRPEQRAMVGRDRRKD 295
>12_02_0682 -
21923334-21923626,21923684-21923733,21923982-21924041,
21924081-21924235
Length = 185
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 240 HDEDGEREQRPETERHVQLDGAHVVMVLQAERQHHV 347
HDE+ RE+R E +R QL H + A + H++
Sbjct: 87 HDEEETRERREELQRRRQLGRRHRITQGIAAQAHNI 122
>08_02_0417 -
16904476-16904662,16904846-16905029,16905150-16905897,
16906003-16906227,16906318-16906485,16906803-16907453
Length = 720
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 607 PSPNIPTAASTKASSCRSRPTSATCSPSP 521
PSP+ + S + SS PT+ T SP+P
Sbjct: 531 PSPSPQSPVSARTSSATPSPTARTPSPAP 559
>04_01_0022 +
324422-324445,324870-325265,325366-325546,325781-326072,
326389-326461,326610-326700,326815-326894,326992-327234
Length = 459
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = -3
Query: 610 TPSPN---IPTAASTKASSCRSRPTSATCSP 527
TP+P + T AST A SC SR TS P
Sbjct: 53 TPTPTTSILSTKASTPAGSCSSRSTSVAPKP 83
>03_01_0296 + 2284385-2285629,2287632-2288594
Length = 735
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 29 NTVLILNYVSIFFIMLHNICNIFNHLY 109
N LI+ +V +F + +IC F HL+
Sbjct: 384 NVDLIITFVIVFMVTAMDICEFFMHLF 410
>03_01_0084 +
676538-676669,677828-677959,678085-678210,678820-678882,
678964-679061,679133-679340,679859-679930,680016-680108,
680297-680398,680568-680665,681059-681140,681274-681362,
681960-682065,682145-682210,682527-682633,682907-683027,
683226-683411,683490-683789,683887-683967,684061-684225,
684297-684383,684476-684601,684750-684830,684917-684988,
685353-685364
Length = 934
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -2
Query: 737 GCXEFMFDAQSDIQRVFVFIALLCIPVMLLGKPLYLLATKKNNPKPEHSNGSVNQGIELQ 558
G EF D+Q++ I+ C PV+ L LL + NP + +G ++ +L
Sbjct: 135 GGKEFSESLAPDVQKLL--ISSSCRPVVRKKAALCLLRLYRKNPDVVNIDGWSDRMAQLL 192
Query: 557 EQTDLG 540
++ DLG
Sbjct: 193 DERDLG 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,015,926
Number of Sequences: 37544
Number of extensions: 378747
Number of successful extensions: 1715
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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