Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k09r
(738 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48843| Best HMM Match : V_ATPase_I (HMM E-Value=0) 171 4e-43
SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_29556| Best HMM Match : Ion_trans (HMM E-Value=0) 33 0.32
SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0) 33 0.32
SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29) 31 0.74
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 29 3.0
SB_47661| Best HMM Match : zf-CCHC (HMM E-Value=0.015) 29 3.9
SB_20824| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_53619| Best HMM Match : GPS (HMM E-Value=2.4e-15) 29 3.9
SB_28990| Best HMM Match : YABBY (HMM E-Value=0.45) 29 3.9
SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_16304| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 28 6.9
SB_51726| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 28 9.1
SB_51044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_9507| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.1
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 28 9.1
SB_20781| Best HMM Match : zf-CCHC (HMM E-Value=0.0016) 28 9.1
>SB_48843| Best HMM Match : V_ATPase_I (HMM E-Value=0)
Length = 1128
Score = 171 bits (417), Expect = 4e-43
Identities = 93/180 (51%), Positives = 117/180 (65%), Gaps = 3/180 (1%)
Frame = -2
Query: 722 MFDAQSDIQRVFVFIALLCIPVMLLGKPLYLLAT-KKNNPKPEHSNGSVNQGIELQEQTD 546
+F Q+ IQ + V IA+LC+P MLL KP YL KK+ + GS + +QE+
Sbjct: 649 VFSGQAVIQPLLVVIAVLCVPWMLLVKPFYLRHQHKKHKLEGFQRLGSPSN---IQEEHQ 705
Query: 545 LGDVQPKPEAKSSGGHDHEDEPFS--EIMIHQAIHTIEYVLSTISHTASYLRLWALSLAH 372
+V E +DHE+E F E +HQAIHTIEY L IS+TASYLRLWALSLAH
Sbjct: 706 PQEVSHSEEFAKPQENDHEEEEFDFGEAFVHQAIHTIEYCLGCISNTASYLRLWALSLAH 765
Query: 371 AELSEVLWNMVLTFGLKDHNYVGAIKLYVAFCFWALFTLAILVMMEGLSAFLHTLRLHWV 192
AELSEVLW+MVL GL +G I ++ F WA+ T+AIL++MEGLSAFLH LRLHW+
Sbjct: 766 AELSEVLWSMVLHLGLNKEGAMGIIVTFLGFGLWAVLTIAILLIMEGLSAFLHALRLHWL 825
>SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1735
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 590 NGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDEPFSEIMIHQAIH 447
+G N+ ++ E LGD QPK + + + D E+E S M +A H
Sbjct: 806 SGDGNESNDISESDGLGDTQPKNKGRPAKRLDDEEEEQSTAMAKRAKH 853
>SB_29556| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 712
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -2
Query: 395 LWALSLAHAELSEVLWNMVLTFGLKDHNYVGAIKLYVAFC---FWALFTLAILVMMEGLS 225
LWA+ L++ WN V+ G++ +Y A+ ++A ++ LF L + +++EG +
Sbjct: 363 LWAMVTVFQILTQENWNQVMFKGMRATSYWAAL-YFIALMTVGYYVLFNLLVAILVEGFT 421
Query: 224 A 222
+
Sbjct: 422 S 422
>SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1457
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -2
Query: 395 LWALSLAHAELSEVLWNMVLTFGLKDHNYVGAIKLYVAFC---FWALFTLAILVMMEGLS 225
LWA+ L++ WN V+ G++ +Y A+ ++A ++ LF L + +++EG +
Sbjct: 620 LWAMVTVFQILTQENWNQVMFKGMRATSYWAAL-YFIALMTVGYYVLFNLLVAILVEGFT 678
Query: 224 A 222
+
Sbjct: 679 S 679
>SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29)
Length = 482
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -2
Query: 620 KKNNPKPEHSNGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDEP 480
KK+ PKP+ S G + + ++++ + +P+AK S G +DEP
Sbjct: 187 KKDEPKPKKSKGPIKKDEPKAKKSEGPMKKDEPKAKKSEGPMKKDEP 233
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2
Query: 620 KKNNPKPEHSNGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDEP 480
KK+ PK + S G + + ++++ + +P+AK S G +DEP
Sbjct: 229 KKDEPKAKKSEGPIKKDEPKPKKSEGPIKKDEPKAKKSEGPMKKDEP 275
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 31.1 bits (67), Expect = 0.97
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 126 DRLETEWLEDVAQTGVEFAHEFNPVQTQSMQECGESLHHD-EDGEREQRPETERHVQLDG 302
DRL+ L + G E V ++M+E GE + D + + EQ+P T+ DG
Sbjct: 39 DRLQKALLAEAEDEGNVEEMENEEVD-ENMEEGGEDIEEDTNEPKEEQQPVTKEKHTPDG 97
Query: 303 AHVVMVLQAE 332
+VM L E
Sbjct: 98 EDIVMKLTEE 107
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 123 EDRLETEWLEDVAQTGVEFAH-EFNPVQTQSMQE-CGESLHHDEDGEREQRPETERHVQL 296
+D+LE E LE A E +Q + + GE DED E E+ ER++Q
Sbjct: 2014 KDQLEVELLEAKALVSTSARRGEARLLQAEKSERFAGEGASDDEDFEEEEEYYRERYLQA 2073
Query: 297 DGAHVVM--VLQAERQHHVP*YFGQLSVGERQGPESE 401
H + LQ++ + + Q + ER+ E +
Sbjct: 2074 SREHEQLRKKLQSQAEKEMEEVLNQKRIVERKLAEEQ 2110
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = -3
Query: 634 TCSPLRRTTPSPNIPTAASTKASSCRSRPTSATCSPSPKLXXXXXXXXXXXXXXXXXXXX 455
T +P +T + + P+ ++T S+ R+ TS + S
Sbjct: 39 TSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPRAGSTTTTSAPSTSTPRTGSTTTTSAP 98
Query: 454 XXXXXXTYSAPSLTQPPTS--DSGPCRSPTLSCPKYYGTWC*RSA*RTITTWAPSS 293
T S + + P TS + R+P+ S P+ T R++ ++ T PS+
Sbjct: 99 STSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPRTGSTITLRTSTTSVMTTTPST 154
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 634 TCSPLRRTTPSPNIPTAASTKASSCRSRPTSATCSPS 524
T PL TT ++ +A T A + S PTS T SPS
Sbjct: 1816 TTFPLINTTGISSMASAQPTTAETTASTPTSITSSPS 1852
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 620 KKNNPKPEHSNGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDE 483
KKNN K + + ++ E E D+ D QP K G D EDE
Sbjct: 415 KKNNDKKDDESSRKDKVQE--EDDDVDDDQPNEMVKQESGLDSEDE 458
>SB_47661| Best HMM Match : zf-CCHC (HMM E-Value=0.015)
Length = 830
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 515 KSSGG-HDHEDEPFSEIMIHQAIHTIEYVLSTISHTASYLRLWALSLAHAEL 363
KS GG D F IHQ H E+ S+ + YL L + L+H ++
Sbjct: 295 KSEGGTEDKHRRRFKRKRIHQVSHEPEHEDSSSGSDSGYLELTSKHLSHVKI 346
>SB_20824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 602 PEHSNGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDE 483
P H+ + + ++L Q + P + SS GH HED+
Sbjct: 300 PGHATVTQHSPVDLNSQIESSQKPRHPSSCSSSGHAHEDD 339
>SB_53619| Best HMM Match : GPS (HMM E-Value=2.4e-15)
Length = 457
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 296 KLYVAFCFWALFTLAILVMMEGLSAFLHTLRLHWVEFMSKFYAGLGYIFQPFCFKTI 126
KLY A F+A ++ +++EG+ + + M KFY +G+ P C I
Sbjct: 339 KLYAALMFYAFMSVFSWMLVEGIHLYQMIIIAFITRAMMKFYYFIGWGL-PMCIVVI 394
>SB_28990| Best HMM Match : YABBY (HMM E-Value=0.45)
Length = 853
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 629 LATKKNNPKPEHSNG--SVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDEPF 477
+A + + KP SN S++ + QE D+ Q KPE + H+D+PF
Sbjct: 553 IAVENPSSKPLRSNSLPSLSGSVWSQESLDMSLFQAKPEKLNDVILCHDDDPF 605
>SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1787
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 515 KSSGG-HDHEDEPFSEIMIHQAIHTIEYVLSTISHTASYLRLWALSLAHAEL 363
KS GG D F IHQ H E+ S+ + YL L + L+H ++
Sbjct: 118 KSEGGTEDKHRRRFKRKRIHQVSHEPEHEDSSSGSDSGYLELTSKHLSHVKI 169
>SB_16304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1489
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 192 NPVQTQSMQECGESLHHDEDGERE 263
NP Q++ ECGE + DED E+E
Sbjct: 1446 NPTTPQAL-ECGEEMEVDEDAEKE 1468
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Frame = -3
Query: 634 TCSPLRRTTP--SPN---IPTAASTKASSCRSRPTSATCSPSP 521
T PL+ TTP +P +P ++ K+SS + PTS+ SPSP
Sbjct: 384 TVVPLQNTTPPSTPKDLYLPKSSQAKSSS-QMTPTSSQSSPSP 425
>SB_51726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 641 PLYLL-ATKKNNPKPEHSNGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDEPFSE 471
PLY+L T P+ S G+E ++ PK E K HD+E+ ++E
Sbjct: 63 PLYMLDETDIQRIAPDESPAIEPPGVENPLYAEISSGVPKDEEKPDKPHDYENPLYAE 120
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = -2
Query: 578 NQGIELQEQTDLGDVQPKPEAKSSGGHDHEDEPFSEIMIHQAIHTIEYVLSTISHTASYL 399
N G +L D+G Q +P+ +SS + E+E EI + + E L+T H L
Sbjct: 749 NVGEDLLTFDDVGTTQSEPQEESS--EESEEEEEDEIAKRKLVE--EMTLTTEEHPKQEL 804
Query: 398 RLWALSLAHAELSEVLWNMVLTFGLKDHN 312
+ +E ++++ + T K+++
Sbjct: 805 HITPEYFTKSEPDDIVFTVKTTTQTKNYD 833
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +3
Query: 174 EFAHEFNPVQTQSMQECGESLHHDEDGEREQRPETERHVQLDGAHVVMVLQAERQH 341
E HE PVQ ++M E++H + E P VQL+ H +Q E H
Sbjct: 372 EAMHEATPVQFEAMPVQLEAMHVQLEAMHEAMP-----VQLEAMHEATPVQFEAMH 422
>SB_51044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = -3
Query: 613 TTPSPN-IPTAASTKASSCRSRPTSATCSPSP 521
T+PSP+ P+++S+ +SS S +S++ PSP
Sbjct: 572 TSPSPSPSPSSSSSSSSSSSSSSSSSSSPPSP 603
>SB_9507| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2735
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 608 PKPEHSNGSVNQGIELQEQTDLGDVQPKPEAKSSGGHDHEDEPFSEI 468
PKP+ SN + N E E D P+P + S D D P I
Sbjct: 2606 PKPQRSNCATNPSNECLETKDEFPFPPEPLSASDFIPDDNDSPRESI 2652
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = +1
Query: 484 SSSWSCPPLDLASGLGCTSPRSVCSCSSMPWLTLPLECSGLGL 612
++ W CPP + C + R CS CSG G+
Sbjct: 3221 NNRWKCPPPECGEHPACVTGRKGEGCSQPDVTPCDSSCSGNGI 3263
>SB_20781| Best HMM Match : zf-CCHC (HMM E-Value=0.0016)
Length = 391
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 433 YSAPS-LTQPPTSDSGPCRSPTLSCP 359
Y+APS LT P + S P R P +CP
Sbjct: 327 YTAPSILTSPKVAYSSPARLPMNACP 352
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,202,900
Number of Sequences: 59808
Number of extensions: 403875
Number of successful extensions: 1677
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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