Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k09f
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1250 + 35726115-35726255,35727435-35727479,35728570-357286... 107 9e-24
03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,795... 96 2e-20
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543... 93 2e-19
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 31 0.53
02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497... 31 0.70
04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903 31 0.93
07_03_0532 + 19171290-19171394,19173122-19173302,19173761-191742... 29 2.1
12_01_1069 - 11060045-11060262,11060404-11060545,11060624-110607... 29 2.8
01_06_1815 - 40064351-40064887,40064987-40065634,40065834-400658... 29 2.8
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 29 3.7
12_01_0243 + 1816725-1816883,1816992-1817114,1817227-1817313,181... 28 5.0
11_06_0380 + 22937941-22937984,22939375-22941481 28 5.0
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 28 5.0
03_02_0816 + 11487811-11488708,11488835-11489235 28 5.0
02_04_0361 - 22359278-22359439,22362291-22362728 28 5.0
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 28 5.0
05_06_0225 - 26555217-26555280,26555647-26555713,26555800-265558... 28 6.5
04_04_1690 - 35382241-35382553,35382614-35382933,35383601-353851... 28 6.5
04_04_0023 + 22212226-22212450,22213511-22213753,22214189-22214320 28 6.5
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 28 6.5
03_05_1058 - 30014796-30014961,30015711-30016450,30016756-300168... 28 6.5
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 27 8.7
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 27 8.7
06_01_0616 + 4467439-4467733,4469232-4469294,4469840-4471176,447... 27 8.7
06_01_0363 - 2588356-2588532,2588612-2588737,2588811-2588888,258... 27 8.7
03_06_0180 + 32175658-32178145,32178765-32178808 27 8.7
>01_06_1250 +
35726115-35726255,35727435-35727479,35728570-35728692,
35728804-35728911,35729247-35729360,35729440-35729613,
35729881-35729976,35730165-35730272,35730389-35730496,
35730595-35730743,35731255-35731408,35732487-35732647,
35733739-35733945,35733968-35734025,35734058-35734222,
35734305-35734388,35735670-35735863,35735952-35736011,
35736203-35736407
Length = 817
Score = 107 bits (256), Expect = 9e-24
Identities = 58/129 (44%), Positives = 83/129 (64%)
Frame = +3
Query: 111 RSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 290
RSE+M QL I E+A +V+ LGE G +QF+DLN D + FQR FVN+V+RC EM RKL
Sbjct: 14 RSEKMCFVQLIIPAESARLAVTYLGELGLLQFKDLNEDKSPFQRIFVNQVKRCSEMSRKL 73
Query: 291 RYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYLEL 470
R+ +++K GV +V+ P ++ +LEA L + EN++LE++ N+ L Q Y EL
Sbjct: 74 RFFNDQINKAGVK-SSVR--PAMQPDIDLEELEAKLREHENDLLEMNTNSEKLLQTYNEL 130
Query: 471 TELRHVLEK 497
E + VL K
Sbjct: 131 LEFKMVLSK 139
>03_02_0381 +
7951360-7951509,7952125-7952169,7952625-7952744,
7952823-7952930,7953256-7953363,7953635-7953808,
7954054-7954191,7954643-7954750,7954866-7954973,
7955086-7955234,7955816-7955969,7956143-7956303,
7956391-7956597,7956703-7956886,7956974-7957057,
7957146-7957345,7957476-7957535,7957631-7957835
Length = 820
Score = 95.9 bits (228), Expect = 2e-20
Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Frame = +3
Query: 105 MFRSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMER 284
+ RSE M L Q+ I E+A+ +VS LGE G +Q +DLN D + FQR + +++RC EM R
Sbjct: 15 LMRSEAMQLVQVIIPTESAHLTVSYLGELGLLQLKDLNADKSPFQRTYAAQIKRCGEMAR 74
Query: 285 KLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYL 464
KLR+ + ++ K G+ A + DLE L + E E+ E++ N LK+ Y
Sbjct: 75 KLRFFKEQMSKAGIS----TSAQLTEISLDFDDLEIKLGELEAELAEVNANNEKLKRTYN 130
Query: 465 ELTELRHVLEKT-EAFFTAQ 521
EL E VL+K E F++AQ
Sbjct: 131 ELLEYSTVLQKAGEFFYSAQ 150
>10_02_0114 +
5431578-5431724,5432753-5432797,5433572-5433691,
5433773-5433880,5434900-5435073,5435366-5435503,
5435879-5435986,5436131-5436238,5436340-5436488,
5437594-5437747,5437980-5438140,5438221-5438427,
5438575-5438758,5438846-5438929,5439023-5439222,
5439314-5439373,5439461-5439665
Length = 783
Score = 92.7 bits (220), Expect = 2e-19
Identities = 53/148 (35%), Positives = 84/148 (56%)
Frame = +3
Query: 105 MFRSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMER 284
+ RSE M L Q+ I E+A+ +VS LG+ G +QF+DLN D + FQR + ++++RC EM R
Sbjct: 14 LMRSEAMQLVQVIIPAESAHLAVSYLGDLGLLQFKDLNADKSPFQRTYASQIKRCGEMAR 73
Query: 285 KLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYL 464
KLR+ ++ K + + EI DLE L + E E+ E++ N L++ Y
Sbjct: 74 KLRFFREQMSKAAI----ATSTQFSGTSLEIDDLEVKLGELEVELTEVNANNDKLQRTYN 129
Query: 465 ELTELRHVLEKTEAFFTAQEEIGMDSLT 548
EL E VL+K E +++ + SL+
Sbjct: 130 ELVEYNIVLQK-EMVTDPSKQVKLGSLS 156
>03_02_0568 +
9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 31.5 bits (68), Expect = 0.53
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 285 KLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYL 464
KL ++A K+G++IP + A + + D +LE T+N+ EL N + K+ YL
Sbjct: 361 KLSDVKAAREKNGIYIPQERFALEEAEKKTMRDKIEYLE-TQNK--ELKMNIESCKKEYL 417
Query: 465 ELTE 476
+L E
Sbjct: 418 DLEE 421
>02_03_0390 +
18448671-18448889,18449567-18449632,18449702-18449761,
18449864-18449959,18452287-18452447,18452669-18452790,
18452872-18453239,18453653-18453739,18453835-18453969,
18454349-18454471,18454771-18454854,18455023-18455187,
18455310-18455486,18455660-18455773,18455912-18456016,
18457056-18457174,18457244-18457385,18457461-18457555,
18457757-18457862,18458125-18458204,18458285-18458461,
18459828-18459912,18460024-18460104,18460208-18460351,
18460468-18460563,18460654-18460854,18461462-18461895,
18462417-18462478,18462622-18462872,18462956-18463030,
18463110-18463300,18463696-18463867,18463956-18464020,
18464646-18464778,18464861-18464962,18465047-18465130,
18465656-18465730,18465818-18465877,18465967-18466223,
18466560-18466608,18466781-18466941,18467013-18467079,
18467174-18467299,18467422-18467592,18468566-18468769,
18469059-18469165,18469608-18469737,18469774-18469959,
18470704-18470742
Length = 2202
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 369 REIIDLEAHLEKTENEILELSHNAVNLKQNYLELTELRHVLEKTEAFFTAQEEIGMDSLT 548
+E +DL+ HL + + L++ + V +Q ++L HV+EK E A E
Sbjct: 142 KEDLDLKNHLSGLKRKYLKIQFDTV--QQLMRVRSDLLHVVEKNEEELNAAEAFESIYGV 199
Query: 549 KSLISDE 569
KSL SD+
Sbjct: 200 KSLCSDD 206
>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
Length = 405
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 269 R*NGTQTPVHRG*GAQRWR---PHSRRQGSPPSSKPEG 373
R +GT+ PVHRG G + W P RR GS S + +G
Sbjct: 265 RVSGTKRPVHRGLGPRGWSTAGPRDRRSGS-ASGRSDG 301
>07_03_0532 +
19171290-19171394,19173122-19173302,19173761-19174245,
19174877-19176283,19176413-19176628
Length = 797
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 228 NAFQRKFVNEVRRCDEMERKLRYIEAEVHKD 320
N F +F + +E+ RK+R +E E+HK+
Sbjct: 657 NKFASRFELKEAEVEELRRKIRLLEEEIHKE 687
>12_01_1069 -
11060045-11060262,11060404-11060545,11060624-11060776,
11060942-11061013,11062774-11063082,11063323-11063378,
11066436-11066533,11066616-11066700,11066800-11067001,
11067471-11067542,11069555-11069624,11071829-11072038,
11072337-11072609,11073912-11074183,11075354-11075557
Length = 811
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 334 GMWTPSLCTSASMYRSLRS 278
G WTP+ TSA YR+LRS
Sbjct: 766 GTWTPNASTSAWSYRALRS 784
>01_06_1815 -
40064351-40064887,40064987-40065634,40065834-40065890,
40065921-40065941,40066714-40066941
Length = 496
Score = 29.1 bits (62), Expect = 2.8
Identities = 31/110 (28%), Positives = 50/110 (45%)
Frame = +3
Query: 195 SVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRYIEAEVHKDGVHIPAVKEAPRAPNPRE 374
S+ DL N + VN V E +L + A ++ H+ + +P A N R
Sbjct: 155 SLSSSDLQNQTNRIEHDLVNTV------ESQL-VLFASDNQQLTHLRHSRSSPEADN-RI 206
Query: 375 IIDLEAHLEKTENEILELSHNAVNLKQNYLELTELRHVLEKTEAFFTAQE 524
+ ++ E E EI L+ + LKQ+ L L+ H+LEK + F Q+
Sbjct: 207 LNAIDRSNELKEFEI-GLTMRKLQLKQSQLALSSHSHMLEKIKLSFGFQK 255
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +3
Query: 276 MERKLRYIEAEVHKDGVHIPAVKEAPRAPNPREII---DLEAHLEKTENEILELSHNAVN 446
+ ++L I +H + + K+A + + + +LE LEK + L H N
Sbjct: 1012 LNQQLEEIRTSLHAEIAALHEEKDAAQLELQQSLASARNLETVLEKQTENLSTLQHANDN 1071
Query: 447 LKQNYLELTELRHV--LEKTEAFFTAQEE 527
LK+N LTE V +E E A EE
Sbjct: 1072 LKKNNCTLTEQFEVIKIELQEEVKMAHEE 1100
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 294 YIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLK---QNY- 461
Y E VH++ + + +E+ L + +EK +NE L LS NLK QN
Sbjct: 564 YNEVTVHQEKCTFLSSQLEKAQLAEKEVQTLLSEIEKMKNENLMLSRENDNLKACEQNLG 623
Query: 462 LELTELRHVLEKTEA 506
E ++L+ + KT+A
Sbjct: 624 TECSQLKATIAKTKA 638
>12_01_0243 +
1816725-1816883,1816992-1817114,1817227-1817313,
1817442-1817546,1817744-1817905,1818473-1818508,
1818637-1818708,1819285-1819562,1820275-1820509
Length = 418
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 240 RKFVNEVRRCDEMERKLRYIEAEVHKDGVHIPAVK 344
RK V+ +RRCDEM KL + KD V +K
Sbjct: 57 RKGVDLLRRCDEMVSKLGLFSSNETKDDVSTANLK 91
>11_06_0380 + 22937941-22937984,22939375-22941481
Length = 716
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 295 YRSLRSISSQRRTSLTNFLWKAFTSGFKSLNCTLPASPSS 176
YRS+ SISSQ + S+ + L +A SL+ + SPS+
Sbjct: 221 YRSMVSISSQDKVSIESILKEASMEFQASLDFFMDVSPSN 260
>08_02_1453 -
27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +3
Query: 345 EAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYLELTELRHVLEKTEAFFTAQE 524
EA RA + ++I DL+ HL + E+++L L + N + E L + A+ +
Sbjct: 175 EAERAQHLKQIHDLQEHLREKESQMLALEEQHRAAQDNIIYKDE---QLREAHAWMARVQ 231
Query: 525 EIGMDSLTKSLISDE 569
E MD+L + E
Sbjct: 232 E--MDTLQSQTMQAE 244
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 237 QRKFVNEVRRCDEMERKLRYIEAEVHKDGVHIPAVKEAPRAP 362
+RK + + +CDE + LR I A V + A +AP P
Sbjct: 168 RRKLLGALEKCDEDLKTLRRIIAAVRAAEMRAAAASDAPPTP 209
>02_04_0361 - 22359278-22359439,22362291-22362728
Length = 199
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 270 DEMERKLRYIEAEVHKDGVH-IPAVKEAPRAPNPREIIDLEAHLEKTENEILE 425
+E+E++ RY+ + + + +H PA+ P P P L+ +E + E
Sbjct: 6 EELEQRSRYLSSLIRRTKLHAAPALAPPPPTPPPEPETKLQLEMEPQPERVEE 58
>02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 363 NPREIIDLEAHLE---KTENEILELSHNAVNLKQNYLELTELRHVLEKTEAFFTAQEEIG 533
NP E++D E K+++ ++E + V +++ +L K E I
Sbjct: 1164 NPSEVVDDEDQRSPPPKSDHSLIEKESSEVKENGTFIQKEKL-----KEEIPGNTLSRIP 1218
Query: 534 MDSLTKSLISDETGQQAATRGR 599
D T+ SDE Q+A +GR
Sbjct: 1219 QDDFTEEYTSDEGWQEAVPKGR 1240
>05_06_0225 -
26555217-26555280,26555647-26555713,26555800-26555871,
26557058-26557109,26557250-26557302,26557476-26557535,
26557718-26558075
Length = 241
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 354 RAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYLELTE 476
+AP P E+ +LEA E+ + I E + NLK + E +
Sbjct: 152 KAPTPEELAELEARRERVKQNI-EWKFESPNLKSSIPEFPD 191
>04_04_1690 - 35382241-35382553,35382614-35382933,35383601-35385164,
35385254-35385372,35385701-35385811,35386068-35386595,
35386702-35386881,35386957-35387556,35387646-35388066,
35388183-35388280,35388372-35389260,35389366-35389544,
35389647-35389763,35389862-35389952,35390578-35390753
Length = 1901
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 332 SRRQGSPPSSKPEGNH*LGGTFRENRKRNSRAVT 433
S + S + +P +GG F ENR RN+ T
Sbjct: 937 SNKSSSTGNQQPAATQAVGGAFSENRDRNAEKCT 970
>04_04_0023 + 22212226-22212450,22213511-22213753,22214189-22214320
Length = 199
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = +2
Query: 35 LIEDLAH-LCFTLNGVLEIIQDGGYVPERGDGFVPTLHSARGGLYLRLRAW*SWQRAVQR 211
++ DL + + F ++G + G + + GDG S +GG+ L W W
Sbjct: 35 VVTDLGNNVVFIVDGCGILGSKGELLVKDGDGEPILFISRKGGIIQALSTWNKWNGYSMD 94
Query: 212 FKSGRKCF-----PKEIR*RGAPLR 271
++ +K PK +GAP+R
Sbjct: 95 YQGKKKLIFSLSDPKSCIAKGAPIR 119
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +3
Query: 324 VHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQN 458
V IP VKE+ P+ + + L+A++ + E E L LS + V ++QN
Sbjct: 1048 VPIP-VKESLDEPSAKINVLLQAYISRLELEGLSLSSDMVYIRQN 1091
>03_05_1058 -
30014796-30014961,30015711-30016450,30016756-30016887,
30017509-30018021,30019208-30019582
Length = 641
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +3
Query: 267 CDEMERKLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVN 446
C E K+ + E HK V + +K R+ A++EK + E L + AV
Sbjct: 136 CKETHPKIAQVLLERHKPDVALVVLK-----CTGRDTFSSAANIEKDDTESLSEAVTAVR 190
Query: 447 LKQNYLELTE 476
++ Y LTE
Sbjct: 191 VRIEYGHLTE 200
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GGFLDGGNVDAIFVHLSLDV-PEFAFHFIATAHLVNEFP 240
G F+ G +V ++F+ + L + P F HL+N+FP
Sbjct: 7 GRFIFGPDVRSLFLTIFLILAPVLVFCIFVARHLINDFP 45
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/90 (25%), Positives = 36/90 (40%)
Frame = +3
Query: 114 SEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLR 293
S E L +L + S E + G + L+ D N + + + R DE+ERK R
Sbjct: 473 SYERELAKLEAEQTDKPASRPEAAKPGLPHWLQLSNDQNKAKEQELKLKRSKDELERKWR 532
Query: 294 YIEAEVHKDGVHIPAVKEAPRAPNPREIID 383
A +H PA+ PR ++
Sbjct: 533 ETCARIHSACPMAPALSVPLATFTPRPPVE 562
>06_01_0616 +
4467439-4467733,4469232-4469294,4469840-4471176,
4472719-4473086,4473526-4473559,4473978-4474421
Length = 846
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = -3
Query: 370 LGFGARGASLTAGMWTPSLCTSASMYRSLRSISSQRRTSLTNFLWKAFTS 221
+G GAR T G WTP L S M R R S L LW T+
Sbjct: 434 IGSGAR----TVGFWTPELGVSQDMAR--RRPKSGSNEELKQILWPGETA 477
>06_01_0363 -
2588356-2588532,2588612-2588737,2588811-2588888,
2589584-2589715,2590768-2590878,2590964-2591191
Length = 283
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 264 RCDEMERKLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTE 410
RC ER R I A+V K +PA K+ P EI + +L+K E
Sbjct: 49 RCQVCERIAREISAQVAKKQQALPATKKVPEI-EIIEIAENVCNLKKQE 96
>03_06_0180 + 32175658-32178145,32178765-32178808
Length = 843
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 451 FKLTALCDS-SRISFSVFSKCASKSMISLGFGARGASLTAGM 329
F TA S R +V C S S +SLG G ++TAG+
Sbjct: 29 FSTTAAAASPDRRLLAVLRGCVSPSHLSLGLQVHGRAVTAGL 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,384,773
Number of Sequences: 37544
Number of extensions: 428645
Number of successful extensions: 1282
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -