Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k07f
(542 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 36 0.021
SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9) 34 0.086
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 33 0.15
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 33 0.20
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17) 28 4.3
SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_10903| Best HMM Match : Aldolase_II (HMM E-Value=9.1e-17) 28 5.7
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 28 5.7
SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_33499| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_48207| Best HMM Match : Peptidase_C5 (HMM E-Value=0.33) 27 9.9
SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1) 27 9.9
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 35.9 bits (79), Expect = 0.021
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 121 IASNMKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 282
++S+MK L++AC ++ E+D C + D GC + L CS YY Q D H
Sbjct: 46 MSSDMKSLVLLIACFSVARATEDDFCKER-DAGC--YVDLKDCSKYY-QCDDFH 95
>SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9)
Length = 117
Score = 33.9 bits (74), Expect = 0.086
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3
Query: 141 VCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLR 263
V SH LSG GC G+GR + E++ R +A LQ +LR
Sbjct: 56 VWSHLHLSGGGC-GKGRHLPKEKQSRGSPPISAALLQHILR 95
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 133 MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 282
MK L++AC ++ E+D C + D GC + L CS YY Q D H
Sbjct: 1 MKSLVLLIACFSVARATEDDYCKER-DAGC--YVDLKDCSKYY-QCDDFH 46
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 334 YHYLLSASYFNNYQTNREGFAKLFRKLSDDSWE 432
Y YL A +F+ N GF K F+K S + WE
Sbjct: 50 YTYLSMAFHFDRDDINLPGFNKFFKKASKEEWE 82
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 352 ASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKM 480
A++F + GFA F+K +++ + ++ + KRGG++
Sbjct: 1 AAHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRGGRV 43
>SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17)
Length = 237
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 418 DDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGD 513
+DS ++ +G +K V K GG+ F H K D
Sbjct: 160 EDSLDQLLGEVKRVLKPGGRFYFIEHIADKSD 191
>SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 310 ASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDD 423
+++ L HYL S + F NYQ +G LF++ D+
Sbjct: 326 STILLNAGLHYLESTN-FTNYQRLIDGIVLLFKRAKDE 362
>SB_10903| Best HMM Match : Aldolase_II (HMM E-Value=9.1e-17)
Length = 280
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 132 YEGVCSHRCLSGSGCAGRGRLML 200
+EGVC+H + G G GR+ML
Sbjct: 63 HEGVCNHLSMMAPGKHGTGRVML 85
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 27.9 bits (59), Expect = 5.7
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +3
Query: 234 KSAALQRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQQLPDEQGRIREALQEI 413
+S + R PI G+ R G + + PLSP ++ D R R LQ +
Sbjct: 119 RSKSPVRSTSPILGRSSSPSRRGGSPSRILNSS-PLSPSKQVVDGDNDTVQRQRRELQLL 177
Query: 414 IGRFVGENHWSHKARH*EGWED 479
IG + +SH + W++
Sbjct: 178 IGELKDRDRFSHWKKDVRDWKE 199
>SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 402 LQEIIGRFVGENHWSHKARH*EGWEDGLLESH 497
L IIG F+G + S KA+ G++DG+ +++
Sbjct: 185 LDVIIGTFIGPQNASSKAQGFLGYQDGVFQTN 216
>SB_33499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 57 RQYFRHTSNALVIFSRIRH*INRIKYEGVCSHRCLS 164
R + RH ++ +F R+ H NR++Y+G ++ C++
Sbjct: 367 RSHVRHEAS---LFGRMNHYENRVEYKGFTANICIA 399
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 313 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWE 432
+L L SY Y A YF+ + GF K F+K + + E
Sbjct: 21 NLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEERE 60
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 312 LTVFETFLPLSPVGLLLQQLPDEQGRIREALQEIIGRFVGENHW 443
L V TF P S V L + +PD +G RE L ++ G W
Sbjct: 32 LLVSATFFPPSTVTLRVSLVPDIRGTSREPLYCLLQSSSGLEKW 75
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 352 ASYFNNYQTNREGFAKLFRKLSDDSWE 432
A +F+ N GF K F+K S + WE
Sbjct: 30 AFHFDRDDINLPGFNKFFKKASKEEWE 56
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 109 RILEKITSAFDVCRKYCLYTHWRRRR 32
R L+ + SA VC +YCLY W R R
Sbjct: 100 RQLQALDSA--VCGQYCLYFLWHRAR 123
>SB_48207| Best HMM Match : Peptidase_C5 (HMM E-Value=0.33)
Length = 184
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 109 RILEKITSAFDVCRKYCLYTHWRRRR 32
R L+ + SA VC +YCLY W R R
Sbjct: 100 RQLQALDSA--VCGQYCLYFLWHRAR 123
>SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1)
Length = 245
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 109 RILEKITSAFDVCRKYCLYTHWRRRR 32
R L+ + SA VC +YCLY W R R
Sbjct: 100 RQLQALDSA--VCGQYCLYFLWHRAR 123
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,199,929
Number of Sequences: 59808
Number of extensions: 327781
Number of successful extensions: 900
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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