Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k06f
(593 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18810.1 68416.m02389 protein kinase family protein contains ... 35 0.036
At2g11005.1 68415.m01177 glycine-rich protein 34 0.062
At3g43530.1 68416.m04621 hypothetical protein contains Pfam prof... 34 0.082
At1g07730.2 68414.m00834 disease resistance-responsive family pr... 34 0.082
At2g27660.1 68415.m03352 DC1 domain-containing protein contains ... 32 0.25
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 32 0.25
At5g62940.1 68418.m07897 Dof-type zinc finger domain-containing ... 31 0.44
At4g30600.1 68417.m04341 signal recognition particle receptor al... 31 0.44
At4g39380.1 68417.m05574 expressed protein 31 0.58
At5g56890.1 68418.m07099 protein kinase family protein contains ... 31 0.77
At3g48470.1 68416.m05291 expressed protein 31 0.77
At5g25820.1 68418.m03064 exostosin family protein contains Pfam ... 30 1.3
At4g30935.1 68417.m04392 WRKY family transcription factor contai... 30 1.3
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 30 1.3
At3g28790.1 68416.m03593 expressed protein 30 1.3
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 29 1.8
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 29 1.8
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 29 1.8
At1g08340.1 68414.m00922 rac GTPase activating protein, putative... 29 1.8
At4g00340.1 68417.m00045 S-locus glycoprotein family protein / c... 29 2.3
At3g29080.1 68416.m03641 hypothetical protein 29 2.3
At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical... 29 2.3
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 29 3.1
At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule ubiq... 29 3.1
At2g43010.2 68415.m05338 phytochrome-interacting factor 4 (PIF4)... 29 3.1
At2g43010.1 68415.m05337 phytochrome-interacting factor 4 (PIF4)... 29 3.1
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 3.1
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 3.1
At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi do... 29 3.1
At2g28670.1 68415.m03485 disease resistance-responsive family pr... 28 4.1
At2g09910.1 68415.m01029 hypothetical protein 28 4.1
At5g51460.3 68418.m06381 trehalose-6-phosphate phosphatase (TPPA... 28 5.4
At5g51460.2 68418.m06380 trehalose-6-phosphate phosphatase (TPPA... 28 5.4
At5g51460.1 68418.m06379 trehalose-6-phosphate phosphatase (TPPA... 28 5.4
At3g50690.1 68416.m05546 leucine-rich repeat family protein 28 5.4
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 28 5.4
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 28 5.4
At5g61100.1 68418.m07666 hypothetical protein 27 7.1
At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family... 27 7.1
At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF052... 27 7.1
At4g29020.1 68417.m04149 glycine-rich protein supporting cDNA gi... 27 9.4
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 9.4
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 27 9.4
At2g25980.1 68415.m03120 jacalin lectin family protein similar t... 27 9.4
At2g22080.1 68415.m02622 expressed protein 27 9.4
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 35.1 bits (77), Expect = 0.036
Identities = 26/102 (25%), Positives = 43/102 (42%)
Frame = -2
Query: 571 SDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDT 392
S S G+ ++ N +N +N + G+ DNN+G + D N+N+G +NG +
Sbjct: 61 SQSPPSPQGNNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKD----NNNNGNNNNGNNN 116
Query: 391 GSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDR 266
DN G + + N+ + G R N DR
Sbjct: 117 NGNDNNGNNN--NGNNNDNNNQNNGGGSNNRSPPPPSRNSDR 156
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = -2
Query: 583 GLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDN 404
G +D+ N+G+ ++ +NG+N N + + +NN+G N+ G N+ + +N
Sbjct: 78 GNNNNDNNNNNNGNNNND--NNNGNNKDNNNNGNNNNGNNNNGNDNN-GNNNNGNNNDNN 134
Query: 403 GIDTGSGDN 377
+ G G N
Sbjct: 135 NQNNGGGSN 143
>At2g11005.1 68415.m01177 glycine-rich protein
Length = 170
Score = 34.3 bits (75), Expect = 0.062
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = -2
Query: 529 WLGS-NGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVD 353
W GS +G GDG+ + G S D G D+ G D+ GSGD+ G
Sbjct: 9 WFGSGDGGGSGGGGGSGDGSGSGDGGGSGDGGGSRDSDGSGDSS-GGGSGDSGGFGD--- 64
Query: 352 VQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDG 245
+D + S+ S+GG R SG NG+ DDG
Sbjct: 65 -NSDNNSVSSDSSGGGSRDGGGSGDNGN----TDDG 95
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -2
Query: 556 GNDGSRDDHWLGSNG-SNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGD 380
G GS D G G S R DG+ D++ G S D G DN D+ G
Sbjct: 20 GGGGSGDGSGSGDGGGSGDGGGSRDSDGSGDSSGGGSGDSGGFGDNSDNNSVSSDSSGGG 79
Query: 379 NR 374
+R
Sbjct: 80 SR 81
>At3g43530.1 68416.m04621 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 615
Score = 33.9 bits (74), Expect = 0.082
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -2
Query: 394 TGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDR-YELVDDGRPNGDRFEF 218
TG+ D G + D +N+L E S + G R V + + D+ D+ R G++
Sbjct: 411 TGTDDAYGSKEIDDRENELEEGSDANGGDNEREVREKETEIDKEVAQGDNEREVGEKETE 470
Query: 217 VDNGRSDGNGLELIYDGRSDSDRYKVVDDGS 125
+D + G G I+DG D + K V + +
Sbjct: 471 ID--KEVGQGDSDIFDGNKDMELNKEVAEST 499
>At1g07730.2 68414.m00834 disease resistance-responsive family
protein contains Pfam PF03018: Plant disease resistance
response protein
Length = 389
Score = 33.9 bits (74), Expect = 0.082
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = -3
Query: 330 GVLSATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAI 151
G SA+G G L T GP + T S++ P S +L + GP + ++S ++ G ++
Sbjct: 66 GTGSASGGLGSLGTNTGPGPLSTTGSSLL-PV-ASSGTLPVTGPGPLPTSSGLLPGASSG 123
Query: 150 GTKSSMMGAGP 118
S G+GP
Sbjct: 124 NLPGS--GSGP 132
>At2g27660.1 68415.m03352 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 718
Score = 32.3 bits (70), Expect = 0.25
Identities = 40/143 (27%), Positives = 57/143 (39%), Gaps = 1/143 (0%)
Frame = -2
Query: 544 SRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRA 365
+R + + N N G +NN G + G N + L G GSG N G A
Sbjct: 222 TRPNRTINPNRPIAQNAAVNGPRRQNNNLGYNAQVG-PNGPNELTGQGSMDGSGYN-GSA 279
Query: 364 SLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGDRFEFVDNGRS-DGNG 188
S + + D+ V V + GD Y V++ G+ + D G DGNG
Sbjct: 280 SATNKEFDVDVDVDVDVDVDVDVDVEVEYEGDVY--VEEANDEGEDVDGNDEGEDVDGNG 337
Query: 187 LELIYDGRSDSDRYKVVDDGSRS 119
LE++ + S Y D GS S
Sbjct: 338 LEIVACVDNLSVAYSESDFGSSS 360
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -2
Query: 556 GNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDN 377
GND DD NG++ N + +++ N S + G N++H + +NG G DN
Sbjct: 198 GNDEENDDENTEENGNDEENEKEDEENSMEENGNESEESG--NEDHSMEENGSGVGE-DN 254
>At5g62940.1 68418.m07897 Dof-type zinc finger domain-containing
protein Dof zinc finger protein, Oryza sativa,
EMBL:AB028129
Length = 372
Score = 31.5 bits (68), Expect = 0.44
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = -2
Query: 526 LGSNGSNVS--NLDRLGDGAIDNNH--GLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASL 359
+G N N+ N GD +NH GL++ G N+N+ NGI TG N G L
Sbjct: 217 MGVNNDNLVMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGG--GL 274
Query: 358 VDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPN 236
+D+ +R +SN Y+ + R + D +PN
Sbjct: 275 MDIST--CQRLMLSNYDHHH--YNHQEDHQRVATIMDVKPN 311
>At4g30600.1 68417.m04341 signal recognition particle receptor alpha
subunit family protein similar to Signal recognition
particle receptor alpha subunit (SR-alpha) (Docking
protein alpha) (DP-alpha) (SP:P08240) [Homo sapiens};
similar to Signal recognition particle receptor alpha
subunit (SR-alpha) (Docking protein alpha) (DP-alpha)
(SP:P06625) [Canis familiaris}; contains Pfam PF04086:
Signal recognition particle, alpha subunit, N-terminal;
contains Pfam PF00448: SRP54-type protein, GTPase domain
Length = 634
Score = 31.5 bits (68), Expect = 0.44
Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 7/150 (4%)
Frame = -2
Query: 547 GSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGR 368
GS+ D G N + VS L +G + NH + +D ND ++N + D
Sbjct: 163 GSKKDDGDGGNKAKVSTLT---NGHSNGNHQMEDDSQETNDLANGKENTSSNVAVDLSKL 219
Query: 367 ASL--VDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELV-DDGRPNGDRFEFVD----N 209
L V+ R S G K V + + V DD P + +F D N
Sbjct: 220 QKLRSKGVRGRGGVRKTDSIGNKSSKVAEPAKKATKKNRVWDDAAPKQSKLDFTDSIDEN 279
Query: 208 GRSDGNGLELIYDGRSDSDRYKVVDDGSRS 119
G +D + G S D+ +V S S
Sbjct: 280 GNNDHVDIVAADQGESMMDKEEVFSSDSES 309
>At4g39380.1 68417.m05574 expressed protein
Length = 518
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -2
Query: 241 PNGDRFEFVDNGRSDGNGLELIY--DGRSDSDRYKVVDDGSRSGNAGTHQALSRAGDSN 71
P+ + E +N +DG+G L++ DG + ++ + S GN G H S AG++N
Sbjct: 238 PHDGQVESTENKINDGSGPTLLFWDDGLTSLSIGGLLSEVSLKGNFGNHCKNSNAGNAN 296
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 30.7 bits (66), Expect = 0.77
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Frame = +2
Query: 104 SPGVAGPAPIIDDFVPIAVGPAIIDEFEPISVGPAIVNEFEPISVGPAIVDEFVPIS--V 277
S G PA + FVP A PA I + P ++ PI+ P + P
Sbjct: 86 SVGGKAPAGVPVVFVPNAPAPATIPVKDLPVASPPVLQPITPIASPPRFIPGDAPKEPPF 145
Query: 278 GPAIVDNPPLAPVADSTPLVQIILNINQASSAP 376
+ P +PV+D P+ + L S+ P
Sbjct: 146 SGRVTPAPVSSPVSDIPPIPSVALPPPTPSNVP 178
>At3g48470.1 68416.m05291 expressed protein
Length = 1017
Score = 30.7 bits (66), Expect = 0.77
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = -2
Query: 406 NGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGDR 227
N ++ G G+N+ ASL +V N+ R+ K + + + D E+VD N D
Sbjct: 524 NTMENGDGENKRSASLTEV-NESSRRNKQKENRKSKNI-SAFVLADPNEIVDLATLNCDT 581
Query: 226 FEFVDNGRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTH-----QALSRAGDSNG 68
D+G D + + + + Y ++DD G TH AL + D++G
Sbjct: 582 ESDKDDGDDDAS-VSSDNSSVTSLEPYDLMDDDKDLGKQFTHLVDVVGALRKTDDADG 638
>At5g25820.1 68418.m03064 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 654
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +2
Query: 83 GPTKGLVSPGVAGPAPIIDDFVPIAV-GPAIIDEFEPISVGPAIVNEFEP-ISVGPAIVD 256
G LV PAP + V + + P+ + E V A P I+ P + +
Sbjct: 147 GLNPSLVKENATAPAPSVKSPVALPILNPSTVKENATAPVASAKAPVALPSINPSPVMKN 206
Query: 257 EFVPISVGPAIVDNPPLAPVADSTPLVQIILNINQASSAP 376
E +P + NP V D++P+V+ + ++ + + P
Sbjct: 207 ETLP-TTSKVPERNPTKKNVGDASPIVRFVPDVKENAKMP 245
>At4g30935.1 68417.m04392 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 466
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 212 VNEFEPISVGPAIVDEFVPISVGPAIVDNPPLAPVADSTPLVQIILNINQASSAPIV 382
V E + P++ ++V P + +P A A PLV + Q S +P+V
Sbjct: 98 VEENRQVETSPSLAASSDSLTVTPCLSLDPATASTAQDLPLVSVPTKQEQRSDSPVV 154
>At4g15180.1 68417.m02328 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 2326
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 224 EPISVGPAIVDEFVPISVGPAIVDNPPLAPVADSTPL 334
EP+ VG A +E + V I D PP P+A + L
Sbjct: 591 EPVQVGEAPTEELPSMEVDMDICDTPPHEPMASDSSL 627
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = -3
Query: 336 TRGVLSATGAR---GGLSTIAGP-TEIGTNSSTMAGPTEI--GSNSLTMAGPTEMGSNSS 175
++G S +G+ G + T G TE G+ SS+ A E+ GS+ T T S +S
Sbjct: 215 SQGTSSKSGSESTAGSIETNTGSKTEAGSKSSSSAKTKEVSGGSSGNTYKDTTGSSSGAS 274
Query: 174 MMAGPTAIGTKSSMMGAGPATPGLTRP 94
PT + + P+TP + P
Sbjct: 275 PSGSPTPTPSTPTPSTPTPSTPTPSTP 301
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Frame = +2
Query: 98 LVSPGVAGPAPIIDDFVPIAV--GPAIIDEFEPISVGPAIVNEFEPISVGPAIVDEFVPI 271
+V GV G +PI P P P P + + V+ P
Sbjct: 14 IVVAGVGGQSPISSPTKSPTTPSAPTTSPTKSPAVTSPTTAPAKTPTASASSPVES--PK 71
Query: 272 SVGPAIVDNPPLAPVADSTPLVQIILNINQASSAPIVPGP 391
S P +PP PV +S+P V + ++ S+P VP P
Sbjct: 72 SPAPVSESSPPPTPVPESSPPVPAPM-VSSPVSSPPVPAP 110
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 215 NEFEPISVGPAIVDEFVP--ISVGPAIVDNPPLAPVADSTPLVQIILNINQASSA 373
N E I+ A ++E V ++GP ++ + A S P +++I NINQ SA
Sbjct: 573 NLMEEIASVEADIEEIVKRRCAIGPPSLEEASSSSPASSVPEMRLIRNINQLESA 627
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = -3
Query: 330 GVLSATGARGGLST--IAGPTEIGTNSSTMAGP-TEIGSNSLTMAGPTEMGSN-SSMMAG 163
G A+G GG+ + +G IG S GP + S GP G S M G
Sbjct: 145 GGFPASGPPGGVPSGPPSGARPIGFGSPPPMGPGMSMPPPSGMPGGPLSNGPPPSGMHGG 204
Query: 162 PTAIGTKSSMMGAGPATPGLTRPLVGP 82
+ G S M GP + G P++GP
Sbjct: 205 HLSNGPPPSGMPGGPLSNGPPPPMMGP 231
>At1g08340.1 68414.m00922 rac GTPase activating protein, putative
similar to rac GTPase activating protein 1 GI:3695059
from [Lotus japonicus]; contains Pfam profile PF00620:
RhoGAP domain
Length = 331
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = -2
Query: 349 QNDLHERSAVSNGGKRRV---VYDSGSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLEL 179
+ + ER A S+ RR D D E +D + + ++ +G+G+ +
Sbjct: 222 EKTVREREASSSVVDRRCSKEAEDGEKEKDNEEEEEDEEEEEEEEDEDEDEEEEGDGVYI 281
Query: 178 IYDGRSDSDRYKVVDDGSRSGNAGTHQALSRAGDSNGHHG 59
I + + S+ KVV D +SG+ + S A DS G +G
Sbjct: 282 IKEEEA-SEIIKVVADEHKSGSIKSEFEGSSATDSKGDNG 320
>At4g00340.1 68417.m00045 S-locus glycoprotein family protein /
curculin-like (mannose-binding) lectin family protein /
PAN domain-containing protein contains Pfam profiles:
PF01453 lectin (probable mannose binding), PF00954
S-locus glycoprotein family, PF00024 PAN domain
Length = 402
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -2
Query: 349 QNDLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGD 230
+ND RS + G RR DSG D +E V D R +GD
Sbjct: 307 RNDAAWRSDDYSDGCRRENGDSGEKSDTFEAVGDLRYDGD 346
>At3g29080.1 68416.m03641 hypothetical protein
Length = 445
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 291 TIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNS 178
T +G TEIG ++ ++ +GS + T PT GS +
Sbjct: 321 TASGQTEIGVSTRCISTSVVVGSEATTNTEPTTTGSRT 358
>At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical to
ethylene-insensitive3 GI:2224933 from [Arabidopsis
thaliana]
Length = 628
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = -2
Query: 343 DLHERSAVSNGGKRRVVYDSGSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGR 164
++ R+ +N + + +N + D N +N S GN +L++D
Sbjct: 533 NIPNRANNNNSSNNQTFFQGNNNNNNVFKFDTADHNNFEAAHNNNNNSSGNRFQLVFDST 592
Query: 163 S-DSDRYKVVDDGSRSGNAGTHQALSR 86
D + DD S G GT + +
Sbjct: 593 PFDMASFDYRDDMSMPGVVGTMDGMQQ 619
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 158 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 280
+G +DE+ I PA+ F+P+ V VDE + I G
Sbjct: 406 IGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKG 447
>At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule
ubiquitin ligase, contains two RING finger domain;
identical to PRT1 [Arabidopsis thaliana] GI:3319884
Length = 410
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 592 SVKGLRKSDSGCGNDGSRDDHWLGSNGSNV 503
+++ K ND + DD WL + GSNV
Sbjct: 276 NIQSYLKEGPSLSNDNNNDDPWLANPGSNV 305
>At2g43010.2 68415.m05338 phytochrome-interacting factor 4 (PIF4) /
basic helix-loop-helix protein 9 (bHLH9) / short under
red-light 2 (SRL2) identical to SP|Q8W2F3
Phytochrome-interacting factor 4 (Basic helix-loop-helix
protein 9) (bHLH9) (Short under red-light 2)
{Arabidopsis thaliana}; supporting cDNA
gi|18026965|gb|AF251694.1|AF251694
Length = 428
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 264 TNSSTMAGPTEIGSNSLTMAGPTEMGSNSS 175
TNSS+ TE+ S+T GP+ GSN S
Sbjct: 142 TNSSSGIRETEMEQYSVTTVGPSHCGSNPS 171
>At2g43010.1 68415.m05337 phytochrome-interacting factor 4 (PIF4) /
basic helix-loop-helix protein 9 (bHLH9) / short under
red-light 2 (SRL2) identical to SP|Q8W2F3
Phytochrome-interacting factor 4 (Basic helix-loop-helix
protein 9) (bHLH9) (Short under red-light 2)
{Arabidopsis thaliana}; supporting cDNA
gi|18026965|gb|AF251694.1|AF251694
Length = 430
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 264 TNSSTMAGPTEIGSNSLTMAGPTEMGSNSS 175
TNSS+ TE+ S+T GP+ GSN S
Sbjct: 142 TNSSSGIRETEMEQYSVTTVGPSHCGSNPS 171
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/76 (27%), Positives = 29/76 (38%)
Frame = +2
Query: 104 SPGVAGPAPIIDDFVPIAVGPAIIDEFEPISVGPAIVNEFEPISVGPAIVDEFVPISVGP 283
SP A PAP P A P P+S P + P++ P + P+S P
Sbjct: 25 SPPTATPAPPTPTTPPPAATPP------PVSAPPPVTTSPPPVTTAPPPANPPPPVS-SP 77
Query: 284 AIVDNPPLAPVADSTP 331
PP P ++P
Sbjct: 78 PPASPPPATPPPVASP 93
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/76 (27%), Positives = 29/76 (38%)
Frame = +2
Query: 104 SPGVAGPAPIIDDFVPIAVGPAIIDEFEPISVGPAIVNEFEPISVGPAIVDEFVPISVGP 283
SP A PAP P A P P+S P + P++ P + P+S P
Sbjct: 25 SPPTATPAPPTPTTPPPAATPP------PVSAPPPVTTSPPPVTTAPPPANPPPPVS-SP 77
Query: 284 AIVDNPPLAPVADSTP 331
PP P ++P
Sbjct: 78 PPASPPPATPPPVASP 93
>At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi
domain-containing protein contains Pfam profiles
PF02170: PAZ domain, PF02171: Piwi domain
Length = 1194
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Frame = -2
Query: 577 RKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHG-LSNDFGFVNDNHGLRDNG 401
R D G G D H G G GDG G + D HG R G
Sbjct: 35 RGGDGDRGYSGRGDGHGRGGGGDRGRGYSGRGDGRGRGGGGDRGRGYSGRGDGHG-RGGG 93
Query: 400 IDTGSG-DNRGRASLVD 353
D G G RGR + D
Sbjct: 94 GDRGRGYSGRGRGFVQD 110
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -2
Query: 283 GSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGRSDSDR-YKVVDDG-SRSGNA 110
G G Y DGR G + +GR DG+G G D R Y DG R G
Sbjct: 20 GDRGRGYSGRGDGRGRGGDGDRGYSGRGDGHG----RGGGGDRGRGYSGRGDGRGRGGGG 75
Query: 109 GTHQALSRAGDSNGHHG 59
+ S GD +G G
Sbjct: 76 DRGRGYSGRGDGHGRGG 92
>At2g28670.1 68415.m03485 disease resistance-responsive family
protein / fibroin-related contains similarity to silk
fibroin heavy chain [Bombyx mori] gi|765323|gb|AAB31861;
contains disease resistance response protien domain
Pfam:FP03018
Length = 447
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -3
Query: 294 STIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTE---MGSNSSMMAGPTAIGTKSSMMGA 124
S+ +GP + T SS GS SL G G+ S++ GP A GA
Sbjct: 90 SSGSGPGLLPTASSVPGSLAGGGSGSLPTTGSATGAGAGTGSALGGGPGAGSALGGGAGA 149
Query: 123 GPATPG 106
GPA G
Sbjct: 150 GPALGG 155
>At2g09910.1 68415.m01029 hypothetical protein
Length = 985
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +2
Query: 164 PAIIDEFEPISVGPAIVNEFEPISVGPAIVDEFVPISVGPAIVDNPPLAPVADSTPLVQI 343
P I +E P+ A N P+S GP+ VD+ +V P D L AD P Q
Sbjct: 317 PPIEEETHPLDGEAATSNP--PVSAGPSGVDQVSHETVNPDSQDRTRLEG-ADVVP-AQE 372
Query: 344 ILNINQASSAPIV 382
I +Q+ S +V
Sbjct: 373 IAECDQSQSVQVV 385
>At5g51460.3 68418.m06381 trehalose-6-phosphate phosphatase (TPPA)
identical to trehalose-6-phosphate phosphatase (AtTPPA)
[Arabidopsis thaliana] GI:2944178
Length = 385
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -2
Query: 172 DGRSDSDRYKVVDDGSRSGNAGTHQALSRAGDSNGHHGSEGQEEFHSFSSSL 17
D R+D D +KV+ DG G A+ + DSN + E F SL
Sbjct: 328 DDRTDEDAFKVLRDGPNHGYGILVSAVPK--DSNAFYSLRDPSEVMEFLKSL 377
>At5g51460.2 68418.m06380 trehalose-6-phosphate phosphatase (TPPA)
identical to trehalose-6-phosphate phosphatase (AtTPPA)
[Arabidopsis thaliana] GI:2944178
Length = 384
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -2
Query: 172 DGRSDSDRYKVVDDGSRSGNAGTHQALSRAGDSNGHHGSEGQEEFHSFSSSL 17
D R+D D +KV+ DG G A+ + DSN + E F SL
Sbjct: 327 DDRTDEDAFKVLRDGPNHGYGILVSAVPK--DSNAFYSLRDPSEVMEFLKSL 376
>At5g51460.1 68418.m06379 trehalose-6-phosphate phosphatase (TPPA)
identical to trehalose-6-phosphate phosphatase (AtTPPA)
[Arabidopsis thaliana] GI:2944178
Length = 385
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -2
Query: 172 DGRSDSDRYKVVDDGSRSGNAGTHQALSRAGDSNGHHGSEGQEEFHSFSSSL 17
D R+D D +KV+ DG G A+ + DSN + E F SL
Sbjct: 328 DDRTDEDAFKVLRDGPNHGYGILVSAVPK--DSNAFYSLRDPSEVMEFLKSL 377
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/59 (20%), Positives = 29/59 (49%)
Frame = -2
Query: 217 VDNGRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTHQALSRAGDSNGHHGSEGQEE 41
+++ ++ +G++ D D + +V + G +G+ L AG+ +GH + E+
Sbjct: 283 IEDSENEEDGVDDEEDDEEDEEEEEVDNADRGLGGSGSTSRLMNAGEIDGHEQGDDDED 341
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 158 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 280
+G IDE+ I PA+ F+P+ V V+E + I G
Sbjct: 427 IGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQG 468
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 27.9 bits (59), Expect = 5.4
Identities = 25/85 (29%), Positives = 32/85 (37%)
Frame = +2
Query: 122 PAPIIDDFVPIAVGPAIIDEFEPISVGPAIVNEFEPISVGPAIVDEFVPISVGPAIVDNP 301
PAP P A+ P + PI+ P VNE P P P++ P D P
Sbjct: 26 PAPTTVTPPPTALPPVTAETPSPIASPPVPVNEPTP---APTTSPTTSPVA-SPPQTDAP 81
Query: 302 PLAPVADSTPLVQIILNINQASSAP 376
P A TP + A+ AP
Sbjct: 82 APGPSAGLTPTSSPAPGPDGAADAP 106
>At5g61100.1 68418.m07666 hypothetical protein
Length = 227
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 218 EFEPISVGPAIVDEFVPISVGPAIVDN---PPLAPVADSTPLVQIILNINQASSAP 376
+ E + V +D+ VP +VDN PP+ S+ +Q++ N N +AP
Sbjct: 98 QVEQVVVKQVRIDQTVPSPRTNQVVDNHQDPPIDQTDPSSTTIQVVDNENLIEAAP 153
>At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family
protein
Length = 513
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 228 GSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPA-TPGLTRPLVG 85
G +S A P+ SS+ GP+ T++ + G+ PA T G T+ L G
Sbjct: 427 GPSSSLFATPSSTAPTSSLF-GPSPTPTQTPLFGSSPASTFGSTQSLFG 474
>At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF05285:
SDA1 domain; similar to mystery 45A
(GI:16797816){Drosophila melanogaster}
Length = 804
Score = 27.5 bits (58), Expect = 7.1
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -2
Query: 592 SVKGLRKSDSGCGNDGSRDDHWLG-SNGSNVSNLDRLGD-GAIDNNHGLSNDFGFVNDNH 419
+V+ L++SD+ G+DG +DD + G +V GD G+ D SND +N+
Sbjct: 516 NVELLQESDNESGSDGDQDDDGVELPIGDDVEQELIPGDCGSEDKAEEDSNDGDDMNNTE 575
Query: 418 GLRDNGIDTGSG 383
D+ IDT G
Sbjct: 576 D--DSDIDTSIG 585
>At4g29020.1 68417.m04149 glycine-rich protein supporting cDNA
gi|20465684|gb|AY096677.1|
Length = 158
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/90 (23%), Positives = 34/90 (37%)
Frame = -3
Query: 390 GPGTIGAELAWLMFKMICTRGVLSATGARGGLSTIAGPTEIGTNSSTMAGPTEIGSNSLT 211
G G +GA L + + GVL G GG+ + G + G + +G
Sbjct: 54 GAGGVGAGLGGVAGGVGGVAGVLPVGGVGGGIGGLGGGVGGLGGLGGLGGGSGLGHGVGG 113
Query: 210 MAGPTEMGSNSSMMAGPTAIGTKSSMMGAG 121
+ G +GS + G +G + G G
Sbjct: 114 IGGDPGIGSGIGGLGGAGGLGGIGGVGGLG 143
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 27.1 bits (57), Expect = 9.4
Identities = 29/101 (28%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
Frame = +2
Query: 104 SPGVAGPAPIIDDFVPIAV-GPAIIDEFEPISVGPAIVNEFEPISVG---PAIVDEFVPI 271
SP + P+P P + P+ PI P PIS G P I+
Sbjct: 528 SPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNSPPIIPSPPFT 587
Query: 272 SVGPAIVDNPPLAPVADSTPLVQIILNINQASSAPIVPGPG 394
P +PPL PV S P+V +S P P PG
Sbjct: 588 GPSPPSSPSPPLPPVIPSPPIV----GPTPSSPPPSTPTPG 624
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = -2
Query: 271 DRYELVDDGRPNGDRFEFVDNGRS-DGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTHQA 95
+ Y+L + G PNG+ ++ + G++ D + + Y + D Y V G G +
Sbjct: 34 EEYDLQNGGVPNGNNVDYKNKGKAIDFDSMS--YGDYGEEDEYAVGSPGDDYGYPESSPL 91
Query: 94 LSRAGDSNG--HHGSEGQEEFHSFSSSLQLTNY 2
+ D + E E + F + NY
Sbjct: 92 SNSLLDPESLIYEDDENYSEQYDFEMEAEPDNY 124
>At2g25980.1 68415.m03120 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 449
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 283 GSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYD 170
GS GD E DDG +G R +V G + ++ +YD
Sbjct: 308 GSGGDGGESWDDGAFDGVRKIYVGQGENGIASVKFVYD 345
>At2g22080.1 68415.m02622 expressed protein
Length = 177
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/74 (25%), Positives = 27/74 (36%)
Frame = -2
Query: 265 YELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGTHQALSR 86
YE+VD NG+ + D+G D G D + V D +G AG +
Sbjct: 56 YEVVDAVEGNGNNDDSGDDGGEDEEG--SADDAEGKETKKGPVSDPDLNGEAGDNDDEPE 113
Query: 85 AGDSNGHHGSEGQE 44
D N + E
Sbjct: 114 GDDGNDDEDDDNHE 127
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,245,194
Number of Sequences: 28952
Number of extensions: 217144
Number of successful extensions: 1104
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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