Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11k02r
         (554 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   3.9  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   5.1  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 15  KKLNGRMFSLNRQSFYN 65
           +K   RMF++N + FYN
Sbjct: 384 RKEQNRMFNINEREFYN 400


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +2

Query: 113 FAWIEAVVQIIVIVTGSIDLIIDAAFVPHVDTTLAWIESTAEV 241
           F WI  +  I      S +      FV H++    W+E+   V
Sbjct: 141 FYWIAPIPSICAHYYRSTNSTEPVRFVQHLEVKFYWLENRTSV 183


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,473
Number of Sequences: 2352
Number of extensions: 14041
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)