Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11k02r
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 31 0.74
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 31 0.74
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 31 0.74
AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin... 30 0.97
AF025452-1|AAB70944.1| 411|Caenorhabditis elegans C-type lectin... 30 1.3
Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z82055-1|CAB04843.1| 405|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical pr... 29 1.7
U64857-6|AAN84847.1| 172|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z81136-3|CAD27610.1| 196|Caenorhabditis elegans Hypothetical pr... 28 5.2
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 9.1
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 9.1
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 421 YGDRRCVNMWDEGCINGQLPGSGWDDYYLNGNFNPG-KRCLNMWDDGC 281
Y R C+ +DEG + + G W + F+ G K+C + W DGC
Sbjct: 455 YKSRSCLEDFDEG-LKKECNGGRWRHQWY---FDKGSKKCFSFWYDGC 498
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = -2
Query: 313 KRCLNMWDDGCANGQLPGAGNDDYYLGGGFNPGKRCVNMWDEGCINDQINGAGNDDYYLN 134
+ CL +D+G G +Y G K+C + W +GC N ++ L+
Sbjct: 458 RSCLEDFDEGLKKECNGGRWRHQWYFDKG---SKKCFSFWYDGCKGANENIFQDELSCLH 514
Query: 133 NGFNPGKR 110
NP K+
Sbjct: 515 TCENPAKK 522
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 421 YGDRRCVNMWDEGCINGQLPGSGWDDYYLNGNFNPG-KRCLNMWDDGC 281
Y R C+ +DEG + + G W + F+ G K+C + W DGC
Sbjct: 455 YKSRSCLEDFDEG-LKKECNGGRWRHQWY---FDKGSKKCFSFWYDGC 498
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = -2
Query: 313 KRCLNMWDDGCANGQLPGAGNDDYYLGGGFNPGKRCVNMWDEGCINDQINGAGNDDYYLN 134
+ CL +D+G G +Y G K+C + W +GC N ++ L+
Sbjct: 458 RSCLEDFDEGLKKECNGGRWRHQWYFDKG---SKKCFSFWYDGCKGANENIFQDELSCLH 514
Query: 133 NGFNPGKR 110
NP K+
Sbjct: 515 TCENPAKK 522
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.7 bits (66), Expect = 0.74
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -2
Query: 421 YGDRRCVNMWDEGCINGQLPGSGWDDYYLNGNFNPG-KRCLNMWDDGC 281
Y R C+ +DEG + + G W + F+ G K+C + W DGC
Sbjct: 455 YKSRSCLEDFDEG-LKKECNGGRWRHQWY---FDKGSKKCFSFWYDGC 498
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = -2
Query: 313 KRCLNMWDDGCANGQLPGAGNDDYYLGGGFNPGKRCVNMWDEGCINDQINGAGNDDYYLN 134
+ CL +D+G G +Y G K+C + W +GC N ++ L+
Sbjct: 458 RSCLEDFDEGLKKECNGGRWRHQWYFDKG---SKKCFSFWYDGCKGANENIFQDELSCLH 514
Query: 133 NGFNPGKR 110
NP K+
Sbjct: 515 TCENPAKK 522
>AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin
protein 3 protein.
Length = 409
Score = 30.3 bits (65), Expect = 0.97
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 397 MWDEGCINGQLPGSGWDDYYLNGNFNPGKRCLNMWDDGCANGQL 266
MW +N + G+ WD ++ +NP RC+ M ++G + L
Sbjct: 213 MWPMDHMNTWVDGTMWDYSNIDSVYNPKNRCIAMANNGTSEYNL 256
>AF025452-1|AAB70944.1| 411|Caenorhabditis elegans C-type lectin
protein 2 protein.
Length = 411
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -2
Query: 397 MWDEGCINGQLPGSGWDDYYLNGNFNPGKRCLNMWDDGCAN---GQLPGAGNDDYY 239
MW +N + G+ WD ++ ++P C+ M ++ + GQ G DYY
Sbjct: 215 MWPMDHVNTWVDGTMWDYSNIDSGYDPTNHCIAMANNATSEYNLGQWFGVDCKDYY 270
>Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 521 LNQSFIKR--NEIFHCHFLSRLFGLFKELWP 435
+N+SF + +++ C FL LFG KEL P
Sbjct: 184 INESFFNKIKDDVVDCRFLKELFGSLKELPP 214
>Z82055-1|CAB04843.1| 405|Caenorhabditis elegans Hypothetical
protein T26H2.1 protein.
Length = 405
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -3
Query: 288 TAVPMDNYPEQATMTITSAVDSIQASVVSTCGTKAASMIKSME 160
TA P+ + PE+A + ++++ +S C ++ S++KS E
Sbjct: 24 TAFPILDLPEKARLNAFKTMENVNLISLSFCSQRSKSIVKSTE 66
>Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 521 LNQSFIKR--NEIFHCHFLSRLFGLFKELWP 435
+N+SF + +++ C FL LFG KEL P
Sbjct: 184 INESFFNKIKDDVVDCRFLKELFGSLKELPP 214
>U64857-6|AAN84847.1| 172|Caenorhabditis elegans Hypothetical
protein C37C3.12 protein.
Length = 172
Score = 28.3 bits (60), Expect = 3.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 191 VPHVDTTLAWIESTAEVIVIVACSG*LSI 277
+ HV + W+ ++A IVI C+G +++
Sbjct: 72 IKHVKYNVCWVSTSAAAIVIAICAGIIAV 100
>Z81136-3|CAD27610.1| 196|Caenorhabditis elegans Hypothetical
protein W02B8.5 protein.
Length = 196
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -2
Query: 484 IVIFCLVSLVCSKSFGHHPATYGDRRCVNMWDEGCINGQLPG--SGWDDYYLNGNFNPGK 311
++I L+S +CS + G+ A + RC + C++ G S D Y N N
Sbjct: 21 VIISSLISTICSSAVGYRHANHSPNRCFS-----CMSQMYEGFMSNGLDRYFNRPRNFSS 75
Query: 310 RC 305
+C
Sbjct: 76 QC 77
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 364 PGSGWDDYYLNGNFNPGKRCLNMWDDGCANGQLPGAGNDDYYLGGGFN 221
PG G + G+ PG R W++G G G N GGGFN
Sbjct: 22 PGFGGPGFGGPGSGGPGPRGPGEWNNGGGRGGF-GGNNGWNNGGGGFN 68
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 27.1 bits (57), Expect = 9.1
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = -3
Query: 423 LMEIAAVSTCGMRAVSMDSFQDRVGMTII*MVTLIPASGALICGMTAVPMDNYPEQATMT 244
+M ++ V+ C + V+ G+T VTL+ A+ +L+ G+ +V + A
Sbjct: 1305 VMTLSTVNQCSVIQVTCS------GITANERVTLLAATTSLVSGVGSVSFNFTCNSAASW 1358
Query: 243 ITSA---VDSIQASVVS-TCGTKAASMIKSMEPVTMTII*TTAS 124
+T+A VDS+ + T T + I S P T T T S
Sbjct: 1359 MTAAGTIVDSVACGRYNLTTSTPTTTTITSTSPRTTTTTIPTQS 1402
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 27.1 bits (57), Expect = 9.1
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = -3
Query: 423 LMEIAAVSTCGMRAVSMDSFQDRVGMTII*MVTLIPASGALICGMTAVPMDNYPEQATMT 244
+M ++ V+ C + V+ G+T VTL+ A+ +L+ G+ +V + A
Sbjct: 1305 VMTLSTVNQCSVIQVTCS------GITANERVTLLAATTSLVSGVGSVSFNFTCNSAASW 1358
Query: 243 ITSA---VDSIQASVVS-TCGTKAASMIKSMEPVTMTII*TTAS 124
+T+A VDS+ + T T + I S P T T T S
Sbjct: 1359 MTAAGTIVDSVACGRYNLTTSTPTTTTITSTSPRTTTTTIPTQS 1402
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.1 bits (57), Expect = 9.1
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = -3
Query: 423 LMEIAAVSTCGMRAVSMDSFQDRVGMTII*MVTLIPASGALICGMTAVPMDNYPEQATMT 244
+M ++ V+ C + V+ G+T VTL+ A+ +L+ G+ +V + A
Sbjct: 1305 VMTLSTVNQCSVIQVTCS------GITANERVTLLAATTSLVSGVGSVSFNFTCNSAASW 1358
Query: 243 ITSA---VDSIQASVVS-TCGTKAASMIKSMEPVTMTII*TTAS 124
+T+A VDS+ + T T + I S P T T T S
Sbjct: 1359 MTAAGTIVDSVACGRYNLTTSTPTTTTITSTSPRTTTTTIPTQS 1402
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.1 bits (57), Expect = 9.1
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = -3
Query: 423 LMEIAAVSTCGMRAVSMDSFQDRVGMTII*MVTLIPASGALICGMTAVPMDNYPEQATMT 244
+M ++ V+ C + V+ G+T VTL+ A+ +L+ G+ +V + A
Sbjct: 1305 VMTLSTVNQCSVIQVTCS------GITANERVTLLAATTSLVSGVGSVSFNFTCNSAASW 1358
Query: 243 ITSA---VDSIQASVVS-TCGTKAASMIKSMEPVTMTII*TTAS 124
+T+A VDS+ + T T + I S P T T T S
Sbjct: 1359 MTAAGTIVDSVACGRYNLTTSTPTTTTITSTSPRTTTTTIPTQS 1402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,752,936
Number of Sequences: 27780
Number of extensions: 306771
Number of successful extensions: 667
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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