Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j24r
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.80 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   7.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 161 LKCNTYMTLVYFYLRIVLLFHYCFILF 81
           L C  Y    +  L  V  F+Y FI+F
Sbjct: 97  LLCTYYFYYAFIILLCVYYFYYAFIIF 123



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 161 LKCNTYMTLVYFYLRIVLLFHYCFILF 81
           L C  Y TL   +L  +  F+  FI+F
Sbjct: 196 LLCLDYFTLHLLFLPCIYYFYSAFIIF 222



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 161 LKCNTYMTLVYFYLRIVLLFHYCFILF 81
           L C  Y  +  F+L  +  F+  FI+F
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAFIIF 156



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -1

Query: 465 LFYNCNCFL*FTMSISFYIIYLVTSRFPYSLY 370
           ++Y  + F+ FT+ + FY + ++     Y  Y
Sbjct: 212 IYYFYSAFIIFTIHLLFYCVLIILLCIYYFYY 243


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 152 NTYMTLVYFYLRIVLLFHYCFILFLNLEYIVLSNV 48
           NT+ + +YF   I L F    I+ L L  I+  N+
Sbjct: 230 NTFWSALYFLTIIFLFFIIPLIILLILYCIIAKNL 264


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 107 LFHYCFILFLNLEYIVLSN 51
           L H CF+L   L YI+L++
Sbjct: 274 LCHLCFLLDEKLSYIILTS 292


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 152  YILTSIYFLFNDNNI 196
            Y+L  IY +FN NN+
Sbjct: 1016 YLLLVIYSVFNMNNV 1030


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 152  YILTSIYFLFNDNNI 196
            Y+L  IY +FN NN+
Sbjct: 1016 YLLLVIYSVFNMNNV 1030


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/54 (22%), Positives = 27/54 (50%)
 Frame = +2

Query: 107 TTRFLNKNKQVSCMYYILTSIYFLFNDNNIQLIKLTFMNCYMCNSKNLKFFASN 268
           T + LN   ++  +++ L+ +  LFN+    ++ L F   ++     + FF +N
Sbjct: 495 TNKQLNTLNKICALHHHLSKLVKLFNETFGIVLLLMFGVSFVVIVITIFFFTAN 548


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/40 (20%), Positives = 21/40 (52%)
 Frame = -2

Query: 203 LIEYYCH*IKNKSKLKCNTYMTLVYFYLRIVLLFHYCFIL 84
           ++E+    + N +K +   ++ +   ++   L+F YC +L
Sbjct: 472 VLEFDVKCVSNYTKQQSKIHLIVRSVFVTTYLMFDYCTVL 511


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/54 (22%), Positives = 27/54 (50%)
 Frame = +2

Query: 107 TTRFLNKNKQVSCMYYILTSIYFLFNDNNIQLIKLTFMNCYMCNSKNLKFFASN 268
           T + LN   ++  +++ L+ +  LFN+    ++ L F   ++     + FF +N
Sbjct: 220 TNKQLNTLNKICALHHHLSKLVKLFNETFGIVLLLMFGVSFVVIVITIFFFTAN 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,601
Number of Sequences: 336
Number of extensions: 3168
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)