Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j24f
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   5.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   5.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   9.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.2  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 115 IVFIDLILPFFYGVL 71
           IVF+ +ILP+F  +L
Sbjct: 179 IVFMTVILPYFINLL 193


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 115 IVFIDLILPFFYGVL 71
           IVF+ +ILP+F  +L
Sbjct: 179 IVFMTVILPYFINLL 193


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 430 GRQRVTHLIEAVE 468
           GR  V+HL+E +E
Sbjct: 264 GRMDVSHLVEEIE 276


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 237 GRCQSSKT*ANCVL 278
           G+CQ  KT  NC +
Sbjct: 31  GKCQRLKTDKNCTI 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,454
Number of Sequences: 336
Number of extensions: 2390
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)