Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j24f
(540 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223526-1|BAD97246.1| 616|Homo sapiens regulatory factor X, 5 ... 38 0.030
X85786-1|CAA59771.1| 616|Homo sapiens binding regulatory factor... 35 0.21
BC017471-1|AAH17471.1| 616|Homo sapiens regulatory factor X, 5 ... 35 0.21
AL391069-23|CAO72161.1| 96|Homo sapiens regulatory factor X, 5... 35 0.21
AL391069-22|CAO72160.1| 118|Homo sapiens regulatory factor X, 5... 35 0.21
AL391069-21|CAO72162.1| 106|Homo sapiens regulatory factor X, 5... 35 0.21
AL391069-20|CAO72159.1| 127|Homo sapiens regulatory factor X, 5... 35 0.21
AL391069-19|CAO72158.1| 123|Homo sapiens regulatory factor X, 5... 35 0.21
AL391069-18|CAO72157.1| 184|Homo sapiens regulatory factor X, 5... 35 0.21
AL391069-17|CAM13082.2| 165|Homo sapiens regulatory factor X, 5... 35 0.21
AL391069-16|CAO72156.1| 230|Homo sapiens regulatory factor X, 5... 35 0.21
AL391069-15|CAM13081.1| 596|Homo sapiens regulatory factor X, 5... 35 0.21
AL391069-14|CAH70327.1| 616|Homo sapiens regulatory factor X, 5... 35 0.21
S39392-1|AAB22439.2| 703|Homo sapiens protein tyrosine phosphat... 31 2.0
M64572-1|AAA35647.1| 913|Homo sapiens protein-tyrosine phosphat... 31 2.0
DQ104439-1|AAZ20185.1| 839|Homo sapiens tyrosine phosphatase pr... 31 2.0
BC126117-1|AAI26118.1| 913|Homo sapiens protein tyrosine phosph... 31 2.0
AL450025-1|CAH73252.1| 913|Homo sapiens protein tyrosine phosph... 31 2.0
AL359963-4|CAH71094.1| 913|Homo sapiens protein tyrosine phosph... 31 2.0
AL162733-1|CAH73386.1| 913|Homo sapiens protein tyrosine phosph... 31 2.0
BC056911-1|AAH56911.1| 235|Homo sapiens dual specificity phosph... 31 3.4
AL160175-16|CAI12822.1| 232|Homo sapiens dual specificity phosp... 31 3.4
AL160175-15|CAI12821.1| 295|Homo sapiens dual specificity phosp... 31 3.4
AL160175-13|CAI12819.1| 235|Homo sapiens dual specificity phosp... 31 3.4
AK097430-1|BAC05048.1| 295|Homo sapiens A. protein. 31 3.4
BC018136-1|AAH18136.1| 959|Homo sapiens GTF2I repeat domain con... 30 4.5
AY648295-1|AAT68469.1| 976|Homo sapiens GTF2I repeat domain con... 30 4.5
AF156489-1|AAF17358.1| 944|Homo sapiens putative transcription ... 30 4.5
AF151354-1|AAF19786.1| 959|Homo sapiens general transcription f... 30 4.5
AF118270-1|AAD14687.2| 944|Homo sapiens muscle TFII-I repeat do... 30 4.5
AF104923-1|AAD27668.1| 944|Homo sapiens putative transcription ... 30 4.5
AF089107-1|AAF21796.1| 959|Homo sapiens RBAP2 protein. 30 4.5
AC005231-1|AAP21877.1| 170|Homo sapiens unknown protein. 30 4.5
AB209389-1|BAD92626.1| 967|Homo sapiens GTF2I repeat domain con... 30 4.5
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot... 29 7.9
>AK223526-1|BAD97246.1| 616|Homo sapiens regulatory factor X, 5
variant protein.
Length = 616
Score = 37.5 bits (83), Expect = 0.030
Identities = 16/49 (32%), Positives = 33/49 (67%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ SG +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSGNDKLYLYLQLPSG 71
>X85786-1|CAA59771.1| 616|Homo sapiens binding regulatory factor
protein.
Length = 616
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>BC017471-1|AAH17471.1| 616|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 616
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>AL391069-23|CAO72161.1| 96|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 96
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>AL391069-22|CAO72160.1| 118|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 118
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>AL391069-21|CAO72162.1| 106|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 106
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>AL391069-20|CAO72159.1| 127|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 127
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>AL391069-19|CAO72158.1| 123|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 123
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>AL391069-18|CAO72157.1| 184|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 184
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>AL391069-17|CAM13082.2| 165|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 165
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>AL391069-16|CAO72156.1| 230|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 230
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>AL391069-15|CAM13081.1| 596|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 596
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>AL391069-14|CAH70327.1| 616|Homo sapiens regulatory factor X, 5
(influences HLA class II expression) protein.
Length = 616
Score = 34.7 bits (76), Expect = 0.21
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 373 DSNKITSMQQIVENTLSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTG 519
++ + T++ Q + T+S+ + +V +++ V+ S +KL LYL+LP+G
Sbjct: 23 EAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSG 71
>S39392-1|AAB22439.2| 703|Homo sapiens protein tyrosine phosphatase
protein.
Length = 703
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 199 SEAELADDAKLHREDV--NHPKHRQTASYNKESVSDSTNAPGSSS 327
S++E++ + H+E + N+P + SVS S+NAPGS S
Sbjct: 232 SDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCS 276
>M64572-1|AAA35647.1| 913|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 913
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 199 SEAELADDAKLHREDV--NHPKHRQTASYNKESVSDSTNAPGSSS 327
S++E++ + H+E + N+P + SVS S+NAPGS S
Sbjct: 425 SDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCS 469
>DQ104439-1|AAZ20185.1| 839|Homo sapiens tyrosine phosphatase
protein.
Length = 839
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 199 SEAELADDAKLHREDV--NHPKHRQTASYNKESVSDSTNAPGSSS 327
S++E++ + H+E + N+P + SVS S+NAPGS S
Sbjct: 425 SDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCS 469
>BC126117-1|AAI26118.1| 913|Homo sapiens protein tyrosine
phosphatase, non-receptor type 3 protein.
Length = 913
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 199 SEAELADDAKLHREDV--NHPKHRQTASYNKESVSDSTNAPGSSS 327
S++E++ + H+E + N+P + SVS S+NAPGS S
Sbjct: 425 SDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCS 469
>AL450025-1|CAH73252.1| 913|Homo sapiens protein tyrosine
phosphatase, non-receptor type 3 protein.
Length = 913
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 199 SEAELADDAKLHREDV--NHPKHRQTASYNKESVSDSTNAPGSSS 327
S++E++ + H+E + N+P + SVS S+NAPGS S
Sbjct: 425 SDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCS 469
>AL359963-4|CAH71094.1| 913|Homo sapiens protein tyrosine
phosphatase, non-receptor type 3 protein.
Length = 913
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 199 SEAELADDAKLHREDV--NHPKHRQTASYNKESVSDSTNAPGSSS 327
S++E++ + H+E + N+P + SVS S+NAPGS S
Sbjct: 425 SDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCS 469
>AL162733-1|CAH73386.1| 913|Homo sapiens protein tyrosine
phosphatase, non-receptor type 3 protein.
Length = 913
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 199 SEAELADDAKLHREDV--NHPKHRQTASYNKESVSDSTNAPGSSS 327
S++E++ + H+E + N+P + SVS S+NAPGS S
Sbjct: 425 SDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCS 469
>BC056911-1|AAH56911.1| 235|Homo sapiens dual specificity
phosphatase 15 protein.
Length = 235
Score = 30.7 bits (66), Expect = 3.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 418 LSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTGVPPHDPL 540
L Q GR ++TH+I E+ + + YLR+P P P+
Sbjct: 23 LDQLGRNKITHIISIHESPQPLLQDITYLRIPVADTPEVPI 63
>AL160175-16|CAI12822.1| 232|Homo sapiens dual specificity
phosphatase 15 protein.
Length = 232
Score = 30.7 bits (66), Expect = 3.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 418 LSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTGVPPHDPL 540
L Q GR ++TH+I E+ + + YLR+P P P+
Sbjct: 20 LDQLGRNKITHIISIHESPQPLLQDITYLRIPVADTPEVPI 60
>AL160175-15|CAI12821.1| 295|Homo sapiens dual specificity
phosphatase 15 protein.
Length = 295
Score = 30.7 bits (66), Expect = 3.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 418 LSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTGVPPHDPL 540
L Q GR ++TH+I E+ + + YLR+P P P+
Sbjct: 20 LDQLGRNKITHIISIHESPQPLLQDITYLRIPVADTPEVPI 60
>AL160175-13|CAI12819.1| 235|Homo sapiens dual specificity
phosphatase 15 protein.
Length = 235
Score = 30.7 bits (66), Expect = 3.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 418 LSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTGVPPHDPL 540
L Q GR ++TH+I E+ + + YLR+P P P+
Sbjct: 23 LDQLGRNKITHIISIHESPQPLLQDITYLRIPVADTPEVPI 63
>AK097430-1|BAC05048.1| 295|Homo sapiens A. protein.
Length = 295
Score = 30.7 bits (66), Expect = 3.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 418 LSQEGRQRVTHLIEAVEALSGAEKLLLYLRLPTGVPPHDPL 540
L Q GR ++TH+I E+ + + YLR+P P P+
Sbjct: 20 LDQLGRNKITHIISIHESPQPLLQDITYLRIPVADTPEVPI 60
>BC018136-1|AAH18136.1| 959|Homo sapiens GTF2I repeat domain
containing 1 protein.
Length = 959
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 205 AELADDAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSSS 327
AE+ +DAK+ +D + PK ++ SVS S+++ SSS
Sbjct: 882 AEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSS 922
>AY648295-1|AAT68469.1| 976|Homo sapiens GTF2I repeat domain
containing protein 1 protein.
Length = 976
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 205 AELADDAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSSS 327
AE+ +DAK+ +D + PK ++ SVS S+++ SSS
Sbjct: 899 AEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSS 939
>AF156489-1|AAF17358.1| 944|Homo sapiens putative transcription
factor protein.
Length = 944
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 205 AELADDAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSSS 327
AE+ +DAK+ +D + PK ++ SVS S+++ SSS
Sbjct: 867 AEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSS 907
>AF151354-1|AAF19786.1| 959|Homo sapiens general transcription factor
3 protein.
Length = 959
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 205 AELADDAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSSS 327
AE+ +DAK+ +D + PK ++ SVS S+++ SSS
Sbjct: 882 AEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSS 922
>AF118270-1|AAD14687.2| 944|Homo sapiens muscle TFII-I repeat
domain-containing protein 1 protein.
Length = 944
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 205 AELADDAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSSS 327
AE+ +DAK+ +D + PK ++ SVS S+++ SSS
Sbjct: 867 AEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSS 907
>AF104923-1|AAD27668.1| 944|Homo sapiens putative transcription
factor protein.
Length = 944
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 205 AELADDAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSSS 327
AE+ +DAK+ +D + PK ++ SVS S+++ SSS
Sbjct: 867 AEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSS 907
>AF089107-1|AAF21796.1| 959|Homo sapiens RBAP2 protein.
Length = 959
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 205 AELADDAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSSS 327
AE+ +DAK+ +D + PK ++ SVS S+++ SSS
Sbjct: 882 AEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSS 922
>AC005231-1|AAP21877.1| 170|Homo sapiens unknown protein.
Length = 170
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 205 AELADDAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSSS 327
AE+ +DAK+ +D + PK ++ SVS S+++ SSS
Sbjct: 93 AEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSS 133
>AB209389-1|BAD92626.1| 967|Homo sapiens GTF2I repeat domain
containing 1 isoform 2 variant protein.
Length = 967
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 205 AELADDAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSSS 327
AE+ +DAK+ +D + PK ++ SVS S+++ SSS
Sbjct: 874 AEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSS 914
>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
precursor protein.
Length = 1253
Score = 29.5 bits (63), Expect = 7.9
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +1
Query: 169 ANDENSKDVKSEAELAD-DAKLHREDVNHPKHRQTASYNKESVSDSTNAPGSSSDXXXXX 345
++D S KSE++ +D D+K D N + + S S +++ SSD
Sbjct: 619 SSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSS 678
Query: 346 XXXXXXXXMDSNKITSMQQIVENTLSQE 429
DS+ + +++ S E
Sbjct: 679 SSSDSSSSSDSSNSSDSSDSSDSSNSSE 706
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,831,416
Number of Sequences: 237096
Number of extensions: 1455187
Number of successful extensions: 10408
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 10353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10404
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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