Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j23r
         (752 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54725 Cluster: ORF-3; n=18; Bacteria|Rep: ORF-3 - Stre...    38   0.35 
UniRef50_A0CMC8 Cluster: Chromosome undetermined scaffold_21, wh...    36   1.4  
UniRef50_UPI00015B455B Cluster: PREDICTED: similar to BEL12_AG t...    34   3.3  
UniRef50_Q9ZCW3 Cluster: Uncharacterized protein RP591; n=10; Ri...    34   4.3  
UniRef50_A3M9H9 Cluster: Putative membrane protein; n=1; Acineto...    33   7.6  

>UniRef50_Q54725 Cluster: ORF-3; n=18; Bacteria|Rep: ORF-3 -
           Streptococcus pneumoniae
          Length = 294

 Score = 37.5 bits (83), Expect = 0.35
 Identities = 19/62 (30%), Positives = 34/62 (54%)
 Frame = +3

Query: 378 VHRFLRPYYTFLVVMWSHCSVQLVYSLKWVFNSIIYFYPTNIITRKFLRMYGCLFVTLSS 557
           V  F + Y T L+V W+  ++ + +S +W+ N  +Y Y  N+I +  L  +   F+T S+
Sbjct: 95  VRHFKKLYRTLLIVPWAFPTIVIAFSWQWILNG-VYGYLPNLIVKLGLMEHTPAFLTDST 153

Query: 558 KA 563
            A
Sbjct: 154 WA 155


>UniRef50_A0CMC8 Cluster: Chromosome undetermined scaffold_21, whole
           genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
           undetermined scaffold_21, whole genome shotgun sequence
           - Paramecium tetraurelia
          Length = 4620

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +1

Query: 208 IRMYKLLMCYSSFCMLKKKTKCIILHESLRWIINSYVTTSKIGEGFTN 351
           I + K +   S + +L  KTKC+I  +S   IINS +  S+I E  +N
Sbjct: 702 IELQKQIFIGSDYNLLISKTKCLIYSQSKNLIINSQLNVSEIQEPISN 749


>UniRef50_UPI00015B455B Cluster: PREDICTED: similar to BEL12_AG
           transposon polyprotein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to BEL12_AG transposon polyprotein -
           Nasonia vitripennis
          Length = 603

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
 Frame = +3

Query: 462 WVFNSIIYFYPTNIITRK-----FLRMYGCLFVTLSSKA 563
           W+ N + +F P  I  +K     FL+ YGC+FV ++SKA
Sbjct: 362 WILNGVDFFGPILIKEKKDRSRSFLKAYGCVFVYMASKA 400


>UniRef50_Q9ZCW3 Cluster: Uncharacterized protein RP591; n=10;
           Rickettsia|Rep: Uncharacterized protein RP591 -
           Rickettsia prowazekii
          Length = 248

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 12/42 (28%), Positives = 28/42 (66%)
 Frame = +3

Query: 405 TFLVVMWSHCSVQLVYSLKWVFNSIIYFYPTNIITRKFLRMY 530
           T+++++ S  S +++ ++KW+  ++IY Y   II  +F+ +Y
Sbjct: 198 TYILMILSDYSQKILINIKWISRNVIYIYCIQIIILQFIFIY 239


>UniRef50_A3M9H9 Cluster: Putative membrane protein; n=1;
           Acinetobacter baumannii ATCC 17978|Rep: Putative
           membrane protein - Acinetobacter baumannii (strain ATCC
           17978 / NCDC KC 755)
          Length = 537

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +3

Query: 414 VVMWSHCSVQLVYSLKWVFNSII--YFYPTNIITRKFLRMYGCLFVTLSSKATEWIL 578
           +  W +     +Y L  + N     +  P N+ T   + + GCLF+   +KAT W+L
Sbjct: 105 IYQWLNLESNFIYMLNLIGNRPYGNFGQPNNMATFLIMGLLGCLFLYEKNKATVWLL 161


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,266,247
Number of Sequences: 1657284
Number of extensions: 14090347
Number of successful extensions: 29021
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29007
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)