Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j23f
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   1.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.8  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   5.8  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   5.8  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 213 RTINLSCQPCI*FVHLLRY 157
           R  NL+CQP + +V   RY
Sbjct: 240 RKENLTCQPAVPYVPFYRY 258


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +2

Query: 329 FDVSVSDCVWYLRASNPEEKQQWIDILESFKVE 427
           FD+    C W  + +N ++ ++   +L +FK +
Sbjct: 73  FDIDKQTCDWKGKVNNCDKLEKPRKVLPNFKTD 105


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +2

Query: 329 FDVSVSDCVWYLRASNPEEKQQWIDILESFKVE 427
           FD+    C W  + +N +  ++   +L +FK +
Sbjct: 80  FDIERQTCDWKTKVNNCDVIEKPRKVLPNFKTD 112


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 101 CFRQSYCVTCMEVLTLNQ 48
           CF   Y V C+E L L++
Sbjct: 89  CFSTKYFVGCVESLLLSE 106


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 102 MFSSIILCYVYGS 64
           MF  IILC VY +
Sbjct: 1   MFDKIILCLVYAT 13


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,976
Number of Sequences: 336
Number of extensions: 2320
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)