Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j23f
         (584 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    26   0.78 
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    25   2.4  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.5  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   7.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   7.3  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 26.2 bits (55), Expect = 0.78
 Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +2

Query: 116 SSDLEEGGTPELRGYLSKWTNYIHGWQDRF-IVLKDSTLSYYKNELESNLGCRGALCLKK 292
           S  L +G    ++G  S    Y     DR  I L D    YY  ELESNL   G L  K 
Sbjct: 308 SITLADGNETVVKGVGSGHLYYYEENGDRRKITLNDV---YYVPELESNLISVGKLVNKG 364

Query: 293 AKVKPHEFDDC 325
           AKV   E   C
Sbjct: 365 AKVTFDETRGC 375


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -3

Query: 168 LLRYPRSSGVPPSSKSELSLTVMFSSIILCYVYGSV 61
           LLR   S+  PP+  +++  +     I+ C +Y S+
Sbjct: 70  LLRPNSSTVAPPNGDNDIIFSNKLVQIVFCVLYSSI 105


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 522 PCDPVDCSEVAEPC 481
           PC P DC++ AE C
Sbjct: 723 PCVPCDCNKHAEIC 736


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 476 QRHGSATSLQSTGSHGHSTRRLTEKITELE 565
           +++  A  L + G + HST  LT++  ELE
Sbjct: 559 EKNPLALQLMAQGLYNHSTVPLTKEEEELE 588


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 476 QRHGSATSLQSTGSHGHSTRRLTEKITELE 565
           +++  A  L + G + HST  LT++  ELE
Sbjct: 559 EKNPLALQLMAQGLYNHSTVPLTKEEEELE 588


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,119
Number of Sequences: 2352
Number of extensions: 9700
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)