Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j15r
(626 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g15230.1 68415.m01737 lipase family protein similar to SP|P07... 82 3e-16
At5g14180.1 68418.m01658 lipase family protein similar to SP|Q64... 58 5e-09
At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger) fa... 28 4.4
At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger) fa... 28 4.4
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 28 4.4
At3g57570.1 68416.m06410 expressed protein 28 5.8
At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger) fa... 27 7.7
>At2g15230.1 68415.m01737 lipase family protein similar to SP|P07098
Triacylglycerol lipase, gastric precursor (EC 3.1.1.3)
{Homo sapiens}; contains Pfam profile PF04083:
ab-hydrolase associated lipase region
Length = 393
Score = 81.8 bits (193), Expect = 3e-16
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Frame = -2
Query: 625 PVAYLEFNANRLL-KLIAPHANSIEALTSLIGINELFGRSDFFTNVGMRFCADGVFFQAM 449
P++YL+ L+ +++ H ++ + +G++++ RSD + C +G
Sbjct: 193 PISYLDHVTAPLVERMVFMH---LDQMVVALGLHQINFRSDMLVKLVDSLC-EG---HMD 245
Query: 448 CTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINNNFFRRYDHGRLKNW 269
CT+ L + G + NA+ + L + P +V+ I H Q+I F +YD+G KN
Sbjct: 246 CTDFLTSITG-TNCCFNASKIEYYLDYEPHPSSVKNIRHLFQMIRKGTFAQYDYGYFKNL 304
Query: 268 RVYRSFTPPRYDLSLITA--PVFLHYVDDDIFADVRDVRKLQIELGRPVGMFRVPHATFS 95
R Y PP + LS I A P+++ Y D ADV DV EL P + +
Sbjct: 305 RTYGLSKPPEFILSHIPASLPMWMGYGGTDGLADVTDVEHTLAEL--PSSPELLYLEDYG 362
Query: 94 HLDFMWGSGAKELLYDRTIQIMRS 23
H+DF+ GS AKE +Y IQ R+
Sbjct: 363 HIDFVLGSSAKEDVYKHMIQFFRA 386
>At5g14180.1 68418.m01658 lipase family protein similar to SP|Q64194
Lysosomal acid lipase/cholesteryl ester hydrolase
precursor (EC 3.1.1.13) {Rattus norvegicus}; contains
Pfam profile PF04083: ab-hydrolase associated lipase
region
Length = 418
Score = 58.0 bits (134), Expect = 5e-09
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Frame = -2
Query: 625 PVAYLEFNANRLLKLIAPHANSIEALTSLIGINELFGRSDFFTNVGMRFCADGVFFQAMC 446
PVAYL + ++ IA EA TS++G E +S + C C
Sbjct: 217 PVAYLS-HMTTVIGDIAAKTFLAEA-TSILGWPEFNPKSGLVGDFIKAICLKAGID---C 271
Query: 445 TNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINNNFFRRYDHGRL-KNW 269
+++ G++ + NA+ + + L + P + + + H Q + + R+Y++G +N
Sbjct: 272 YDLVSVITGKNCCL-NASTIDLFLANEPQSTSTKNMIHLAQTVRDKELRKYNYGSSDRNI 330
Query: 268 RVYRSFTPPRYDLSLIT--APVFLHYVDDDIFADVRDVRKLQIELG-RPVGMFRVPHAT- 101
+ Y PP Y++S I P+F Y D ADV+DV L + + V
Sbjct: 331 KHYGQAIPPAYNISAIPHELPLFFSYGGLDSLADVKDVEFLLDQFKYHDIDKMNVQFVKD 390
Query: 100 FSHLDFMWGSGAKELLYDR 44
++H DF+ G AK+++Y++
Sbjct: 391 YAHADFIMGVTAKDVVYNQ 409
>At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 438
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +3
Query: 333 CAICLTAMPAGVCPSFTGNIVALCMSSLRPAKANN 437
CAICL A VC G+ VA CMS L+ K+ N
Sbjct: 387 CAICLDAPSEAVCVP-CGH-VAGCMSCLKEIKSKN 419
>At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 462
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +3
Query: 333 CAICLTAMPAGVCPSFTGNIVALCMSSLRPAKANN 437
CAICL A VC G+ VA CMS L+ K+ N
Sbjct: 411 CAICLDAPSEAVCVP-CGH-VAGCMSCLKEIKSKN 443
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 415 CVQQKRITYLCTSPGKIRHQRKISF 489
C + I LCTS GKI + R+++F
Sbjct: 658 CTPGRMIDILCTSSGKITNLRRVTF 682
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 622 VAYLEFNANRLLKLIAPHANSIEALTSLIG 533
V L F+++R+LKLI A S++ SLIG
Sbjct: 587 VTGLTFDSDRVLKLIPEWARSVQNWNSLIG 616
>At3g16090.1 68416.m02033 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 492
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1
Query: 409 LHCVQQKRITYLCTSP--GKIRHQRKISF 489
LH + QKR+ Y+ T+P K+ H R +SF
Sbjct: 116 LHWLAQKRVEYIETTPSVSKLSHFRIVSF 144
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,749,155
Number of Sequences: 28952
Number of extensions: 292961
Number of successful extensions: 675
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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